UHGV-0334167 (vOTU-007242)

Viral Genome: UHGV-0334167

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0334167
vOTU ID	vOTU-007242
Representative Genome?	Yes
Source	mMGE
Original genome ID	k99_83948_round1256~2319578
Associated BioSample	SAMEA4813813
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9827
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.48
Jumbo phage	No

Genome content
Genome length (bp)	42,276
GC content	54.95%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	72
CDS density	91%
Average CDS length (bps)	536.67
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0334167_1	phrog_36	69.5	5.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0334167_1	UniRef90_A0A6N7TNN9	283.0	0	N/A	N/A
eggNOG-mapper	UHGV-0334167_1	748224.HMPREF9436_01463	83.2	2.57e-18	N/A	N/A
Pfam	UHGV-0334167_1	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0334167_1	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0334167_3	K01160	58.4	2.3e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0334167_3	phrog_34	58.5	1.4e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0334167_3	UniRef90_A0A6N7TND6	245.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0334167_3	875454.BAEW01000002_gene491	143.0	1.69978e-42	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0334167_3	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0334167_3	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0334167_3	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_4	phrog_14697	49.9	0.00000000000004	N/A	unknown function
eggNOG-mapper	UHGV-0334167_4	665950.HMPREF1025_01969	68.2	0.0000000000658	COG NOG28949 non supervised orthologous group	N/A
COG	UHGV-0334167_4	COG0241	N/A	N/A	Histidinol phosphatase/D-glycero-mannoheptose bisphosphatephosphatase, HAD superfamily	N/A
PHROG	UHGV-0334167_6	phrog_757	172.0	0	DNA methyltransferase	other
UniRef90	UHGV-0334167_6	UniRef90_UPI001C00B13F	437.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0334167_6	748224.HMPREF9436_03069	327.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0334167_6	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0334167_6	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_8	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0334167_9	K02086	63.3	3.9e-18	dnaD; DNA replication protein	N/A
PHROG	UHGV-0334167_9	phrog_186	74.7	1.1e-21	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0334167_9	UniRef90_A0A844D5V0	223.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0334167_9	748224.HMPREF9436_03357	65.9	0.000000000651	N/A	N/A
Pfam	UHGV-0334167_9	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0334167_9	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0334167_9	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0334167_9	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
UniRef90	UHGV-0334167_10	UniRef90_UPI001CBB85F6	113.0	2.37e-28	single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0334167_10	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_11	phrog_2760	186.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0334167_11	UniRef90_A0A3A6EAW6	533.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0334167_11	1235794.C811_01355	155.0	8.01543e-43	RecT family	N/A
Pfam	UHGV-0334167_11	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0334167_11	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0334167_11	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0334167_11	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_12	phrog_674	147.8	7.84727e-44	N/A	unknown function
UniRef90	UHGV-0334167_12	UniRef90_A0A3A6E846	482.0	0	N/A	N/A
eggNOG-mapper	UHGV-0334167_12	556268.OFAG_00840	85.5	1.95e-16	N/A	N/A
Pfam	UHGV-0334167_12	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0334167_12	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_13	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_14	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_15	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_16	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_18	phrog_4433	172.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0334167_18	33035.JPJF01000122_gene2458	103.0	4.58e-23	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0334167_18	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0334167_18	NF007410	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0334167_21	1121865.OMW_01950	67.4	0.0000000000000871	N/A	N/A
structural_annotation	UHGV-0334167_21	PF17516,NF007197	N/A	N/A	N/A	N/A
KOfam	UHGV-0334167_22	K07741	96.5	6.9e-28	antB; anti-repressor protein	N/A
PHROG	UHGV-0334167_22	phrog_5817	102.5	4.1e-30	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0334167_22	UniRef90_R6NBT5	183.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-0334167_22	903814.ELI_3141	122.0	1.09e-30	AntA/AntB antirepressor	N/A
Pfam	UHGV-0334167_22	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-0334167_22	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0334167_22	PF02498,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-0334167_25	K22300	48.3	0.00000000000021	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0334167_25	phrog_2967	50.0	0.000000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-0334167_25	UniRef90_A0A844DFR0	184.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0334167_25	748224.HMPREF9436_01444	144.0	1.62971e-42	N/A	N/A
Pfam	UHGV-0334167_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0334167_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0334167_25	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_27	phrog_888	64.5	1.1e-33	N/A	unknown function
UniRef90	UHGV-0334167_27	UniRef90_A0A6N7TMA2	452.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-0334167_27	1415774.U728_165	88.6	3.04e-18	Short C-terminal domain	N/A
Pfam	UHGV-0334167_27	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-0334167_27	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0334167_27	PF15947,PF14471	N/A	N/A	N/A	N/A
UniRef90	UHGV-0334167_30	UniRef90_A0A6N7TLT0	397.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0334167_30	266265.Bxe_A3948	53.1	0.000000484	Helix-turn-helix domain	N/A
Pfam	UHGV-0334167_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0334167_30	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0334167_30	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0334167_31	K14059	135.2	8.1e-40	int; integrase	N/A
PHROG	UHGV-0334167_31	phrog_1	162.8	0	integrase	integration and excision
UniRef90	UHGV-0334167_31	UniRef90_A0A6N7TNQ4	736.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0334167_31	411471.SUBVAR_05137	251.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0334167_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0334167_31	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0334167_31	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_33	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_34	phrog_20016	200.7	0	N/A	unknown function
UniRef90	UHGV-0334167_34	UniRef90_A0A285PT46	215.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0334167_34	1226322.HMPREF1545_00077	184.0	0	N/A	N/A
structural_annotation	UHGV-0334167_34	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_35	phrog_16490	147.3	7.84727e-44	N/A	unknown function
eggNOG-mapper	UHGV-0334167_35	1408437.JNJN01000043_gene803	144.0	1.53e-39	N/A	N/A
PHROG	UHGV-0334167_36	phrog_22984	76.9	1.6e-22	N/A	unknown function
PHROG	UHGV-0334167_37	phrog_21718	120.5	1.2e-35	N/A	unknown function
eggNOG-mapper	UHGV-0334167_37	397290.C810_05210	100.0	1.06e-24	N/A	N/A
PHROG	UHGV-0334167_38	phrog_3754	97.9	1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0334167_38	1235790.C805_00054	110.0	9.17e-30	N/A	N/A
eggNOG-mapper	UHGV-0334167_40	1384065.JAGS01000001_gene3265	49.3	0.00000174	sequence-specific DNA binding	N/A
COG	UHGV-0334167_40	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0334167_40	PF13560,NF040522	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_42	PF07870,MF_01506	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0334167_45	411483.FAEPRAA2165_00757	179.0	0	N/A	N/A
PHROG	UHGV-0334167_46	phrog_15303	115.6	2.2e-34	N/A	unknown function
Pfam	UHGV-0334167_46	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-0334167_48	K07273	167.7	0	acm; lysozyme	N/A
PHROG	UHGV-0334167_48	phrog_291	118.2	8.3e-35	endolysin	lysis
UniRef90	UHGV-0334167_48	UniRef90_A0A564U0D3	417.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0334167_48	718252.FP2_04890	248.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0334167_48	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0334167_48	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0334167_48	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_49	phrog_1382	50.9	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0334167_49	33035.JPJF01000043_gene998	46.2	0.00000285	N/A	N/A
eggNOG-mapper	UHGV-0334167_51	748224.HMPREF9436_01407	156.0	2.65e-41	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0334167_52	phrog_3558	201.7	0	tail protein	tail
UniRef90	UHGV-0334167_52	UniRef90_A0A4D6A797	79.3	0.00000000000239	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0334167_52	1035184.HMPREF1042_1326	84.0	0.0000000000000351	Prophage endopeptidase tail	N/A
Pfam	UHGV-0334167_52	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0334167_52	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0334167_52	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0334167_53	UniRef90_A0A417QGC1	117.0	1.6e-28	MtfA protein	N/A
eggNOG-mapper	UHGV-0334167_53	411490.ANACAC_00709	104.0	2.78e-24	phage tail	N/A
COG	UHGV-0334167_53	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0334167_53	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_54	phrog_28775	129.9	1.9e-38	tail length tape measure protein	tail
UniRef90	UHGV-0334167_54	UniRef90_A0A6N7TLD3	1416.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0334167_54	883066.HMPREF9233_00612	127.0	4.71e-27	tape measure	N/A
Pfam	UHGV-0334167_54	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0334167_54	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0334167_54	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0334167_54	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_57	phrog_885	71.4	1.1e-20	major tail protein	tail
eggNOG-mapper	UHGV-0334167_57	1111121.HMPREF1247_0789	170.0	0	N/A	N/A
structural_annotation	UHGV-0334167_57	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_58	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_59	phrog_17977	40.4	0.00000000004	N/A	unknown function
UniRef90	UHGV-0334167_59	UniRef90_A0A844DHJ8	117.0	9.35e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0334167_59	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_61	phrog_544	137.5	8.99998e-41	major head protein	head and packaging
UniRef90	UHGV-0334167_61	UniRef90_R0BKA1	434.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0334167_61	476272.RUMHYD_01776	321.0	0	N/A	N/A
structural_annotation	UHGV-0334167_61	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_64	phrog_5	48.6	0.0000000000002	tail completion or Neck1 protein	connector
UniRef90	UHGV-0334167_64	UniRef90_A0A6N7TNP6	295.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0334167_64	1123309.AQYB01000018_gene814	89.4	8.96e-21	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0334167_64	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0334167_64	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_67	phrog_2468	78.8	3.8e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0334167_67	UniRef90_A0A6N7TLR7	644.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0334167_67	1504822.CCNO01000013_gene286	112.0	1.68e-24	cell adhesion	N/A
Pfam	UHGV-0334167_67	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0334167_67	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334167_67	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_68	phrog_64	120.1	8.1e-36	portal protein	head and packaging
UniRef90	UHGV-0334167_68	UniRef90_A0A6N7TNT3	892.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0334167_68	642492.Clole_2764	82.8	0.000000000000041	phage portal protein, SPP1	N/A
Pfam	UHGV-0334167_68	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0334167_68	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0334167_69	K06909	142.1	5.20022e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0334167_69	phrog_10250	171.6	0	N/A	unknown function
UniRef90	UHGV-0334167_69	UniRef90_A0A844D8I4	841.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0334167_69	411490.ANACAC_00783	486.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0334167_69	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0334167_69	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0334167_69	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0334167_69	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0334167_69	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_70	phrog_309	103.6	1.5e-30	terminase small subunit	head and packaging
UniRef90	UHGV-0334167_70	UniRef90_UPI000AC737F1	94.0	1.54e-21	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0334167_70	748224.HMPREF9436_03342	170.0	0	transposase activity	N/A
COG	UHGV-0334167_70	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
KOfam	UHGV-0334167_71	K00571	103.3	3.2e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0334167_71	phrog_498	262.6	0	DNA methyltransferase	other
UniRef90	UHGV-0334167_71	UniRef90_A0A1H0YNW6	352.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0334167_71	742823.HMPREF9465_00225	311.0	0	PFAM DNA methylase N-4 N-6	N/A
PADLOC	UHGV-0334167_71	MTase_II_00015	270.9	0	Type II methyltransferase	RM
Pfam	UHGV-0334167_71	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0334167_71	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0334167_71	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0334167_72	phrog_498	139.8	2.20004e-41	DNA methyltransferase	other
UniRef90	UHGV-0334167_72	UniRef90_E2ZNR4	242.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0334167_72	748224.HMPREF9436_03344	242.0	0	ParB-like nuclease domain	N/A
PADLOC	UHGV-0334167_72	MTase_II_00015	89.0	6.6e-26	Type II methyltransferase	RM
Pfam	UHGV-0334167_72	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0334167_72	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0334167_72	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A