UHGV-0334723 (vOTU-001878)

Viral Genome: UHGV-0334723

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0334723
vOTU ID	vOTU-001878
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_263229_round8-12~2905929
Associated BioSample	SAMN06233224
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9709
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.71
Jumbo phage	No

Genome content
Genome length (bp)	34,052
GC content	63.93%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	56
CDS density	93%
Average CDS length (bps)	564.54
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0334723_1	UniRef90_C4F8E5	87.0	1.01e-18	Erf family protein	N/A
Pfam	UHGV-0334723_1	PF04404	N/A	N/A	ERF superfamily	ERF
KOfam	UHGV-0334723_2	K03111	140.6	1.70006e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0334723_2	phrog_44	129.6	2.2e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0334723_2	UniRef90_A0A1Y3UKN9	204.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0334723_2	521095.Apar_0020	195.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0334723_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0334723_2	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0334723_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0334723_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0334723_2	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334723_3	PF13020,MF_00048,NF009154,COG0792	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_4	phrog_15768	135.6	4.1e-40	N/A	unknown function
UniRef90	UHGV-0334723_4	UniRef90_A0A1Y4HU71	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-0334723_4	521003.COLINT_02320	204.0	0	N/A	N/A
Pfam	UHGV-0334723_4	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0334723_4	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0334723_5	K02315	121.8	7.3e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0334723_5	phrog_50	101.3	1.1e-29	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0334723_5	UniRef90_A0A1Y4HSG3	329.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0334723_5	521003.COLINT_02321	152.0	3.36312e-44	IstB-like ATP binding protein	N/A
Pfam	UHGV-0334723_5	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0334723_5	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
eggNOG-mapper	UHGV-0334723_6	469378.Ccur_02900	68.6	0.000000000000838	N/A	N/A
PHROG	UHGV-0334723_9	phrog_424	96.9	2.3e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0334723_9	UniRef90_A0A3N0IUU6	308.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0334723_9	411476.BACOVA_03904	253.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0334723_9	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0334723_9	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-0334723_14	K03497	62.8	7.4e-18	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0334723_14	phrog_498	166.9	0	DNA methyltransferase	other
UniRef90	UHGV-0334723_14	UniRef90_UPI00096ABC7C	208.0	0	ParB/Srx family N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0334723_14	521003.COLINT_02335	202.0	0	DNA methylase	N/A
PADLOC	UHGV-0334723_14	MTase_II_00015	100.9	2.1e-29	Type II methyltransferase	RM
Pfam	UHGV-0334723_14	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0334723_14	COG0863	N/A	N/A	DNA modification methylase	N/A
PHROG	UHGV-0334723_15	phrog_12517	309.3	0	N/A	unknown function
UniRef90	UHGV-0334723_15	UniRef90_UPI001D11FDCC	369.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0334723_15	323098.Nwi_0815	290.0	0	DNA methylase	N/A
PADLOC	UHGV-0334723_15	MTase_II_00137	63.0	8e-18	Type II methyltransferase	RM
Pfam	UHGV-0334723_15	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0334723_15	COG0863	N/A	N/A	DNA modification methylase	N/A
PHROG	UHGV-0334723_16	phrog_10302	47.8	0.00000000000019	N/A	unknown function
PHROG	UHGV-0334723_17	phrog_338	88.7	8.6e-26	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0334723_17	UniRef90_A0A1Y4HSH3	187.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0334723_17	521003.COLINT_02336	184.0	0	HNH nucleases	N/A
Pfam	UHGV-0334723_17	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0334723_17	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0334723_17	PF01844	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_18	phrog_83	46.9	0.00000000000048	terminase small subunit	head and packaging
UniRef90	UHGV-0334723_18	UniRef90_C4F8G7	178.0	0	Putative phage terminase, small subunit, P27 family	N/A
Pfam	UHGV-0334723_18	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0334723_18	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0334723_18	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_19	phrog_9	129.3	2.7e-38	terminase large subunit	head and packaging
UniRef90	UHGV-0334723_19	UniRef90_UPI000986BBFD	679.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0334723_19	521003.COLINT_02339	650.0	0	Terminase	N/A
COG	UHGV-0334723_19	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0334723_19	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_20	phrog_104	240.9	0	portal protein	head and packaging
UniRef90	UHGV-0334723_20	UniRef90_A0A8F2DQP9	670.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0334723_20	521003.COLINT_02340	663.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0334723_20	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_21	phrog_13257	131.2	6.4e-39	head maturation protease	head and packaging
UniRef90	UHGV-0334723_21	UniRef90_G1WIZ6	251.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0334723_21	742742.HMPREF9452_01309	251.0	0	cell adhesion	N/A
COG	UHGV-0334723_21	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_22	phrog_9857	80.5	2.1e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0334723_22	UniRef90_UPI00096AB01B	156.0	0	N/A	N/A
eggNOG-mapper	UHGV-0334723_22	521003.COLINT_02342	139.0	4.85001e-40	N/A	N/A
PHROG	UHGV-0334723_23	phrog_10	98.4	9.8e-29	major head protein	head and packaging
UniRef90	UHGV-0334723_23	UniRef90_A0A1Y4HSH6	465.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0334723_23	521003.COLINT_02343	417.0	0	Phage capsid family	N/A
Pfam	UHGV-0334723_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-0334723_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_24	phrog_4366	42.7	0.00000000001	head fiber protein	head and packaging
UniRef90	UHGV-0334723_24	UniRef90_UPI001C385440	68.6	0.000000000000926	head fiber protein	N/A
PHROG	UHGV-0334723_25	phrog_137	57.6	1.9e-16	head-tail adaptor Ad1	connector
UniRef90	UHGV-0334723_25	UniRef90_UPI00096AB728	164.0	0	Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-0334723_25	521003.COLINT_02345	147.0	5.46506e-44	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0334723_25	PF09355	N/A	N/A	N/A	Phage_Gp19
PHROG	UHGV-0334723_26	phrog_501	84.3	1.3e-24	head closure Hc1	connector
UniRef90	UHGV-0334723_26	UniRef90_A0A1X2Z8U5	84.7	5.17e-19	N/A	N/A
eggNOG-mapper	UHGV-0334723_26	521003.COLINT_02346	127.0	8.63e-37	N/A	N/A
structural_annotation	UHGV-0334723_26	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_28	phrog_123	47.5	0.00000000000028	tail terminator	connector
UniRef90	UHGV-0334723_28	UniRef90_A0A7Y0ENF2	64.3	0.0000000000628	N/A	N/A
eggNOG-mapper	UHGV-0334723_28	471856.Jden_2315	72.0	0.00000000000000928	N/A	N/A
structural_annotation	UHGV-0334723_28	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_29	phrog_117	127.8	6.7e-38	major tail protein	tail
UniRef90	UHGV-0334723_29	UniRef90_A0A415JHM5	301.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0334723_29	521003.COLINT_02349	300.0	0	domain, Protein	N/A
COG	UHGV-0334723_29	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0334723_29	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_32	phrog_58	228.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0334723_32	158787.BSCA_0997	268.0	0	Transglycosylase SLT domain	N/A
Pfam	UHGV-0334723_32	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0334723_32	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0334723_32	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0334723_32	PF20155,MF_04138,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_33	phrog_5577	40.6	0.000000000029	minor tail protein	tail
UniRef90	UHGV-0334723_33	UniRef90_UPI001D06966C	314.0	0	phage tail family protein	N/A
COG	UHGV-0334723_33	COG4722	N/A	N/A	Phage-related protein YomH	N/A
PHROG	UHGV-0334723_34	phrog_538	59.5	2.6e-17	minor tail protein	tail
UniRef90	UHGV-0334723_34	UniRef90_UPI001D096863	326.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0334723_34	931626.Awo_c30930	58.9	0.000000852	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0334723_34	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0334723_34	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0334723_36	UniRef90_A0A096LKM2	409.0	0	N/A	N/A
eggNOG-mapper	UHGV-0334723_36	742722.HMPREF9463_00259	409.0	0	N/A	N/A
Pfam	UHGV-0334723_36	PF19789	N/A	N/A	N/A	DUF6273
eggNOG-mapper	UHGV-0334723_37	479437.Elen_2642	152.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0334723_37	PF05635,TIGR02436	N/A	N/A	N/A	N/A
KOfam	UHGV-0334723_38	K00986	97.3	1.8e-28	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0334723_38	phrog_1423	154.2	1.4013e-45	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0334723_38	UniRef90_UPI0018F23E0A	403.0	0	RNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0334723_38	445975.COLSTE_02147	370.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0334723_38	icity0040	62.2	1.2e-17	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0334723_38	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0334723_38	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0334723_38	PF00078,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_39	phrog_18593	89.0	5.2e-26	N/A	unknown function
UniRef90	UHGV-0334723_39	UniRef90_B6GDG6	132.0	1.3e-36	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0334723_39	411460.RUMTOR_02099	103.0	3.02e-25	N/A	N/A
Pfam	UHGV-0334723_39	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0334723_39	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0334723_41	phrog_443	53.6	0.0000000000000063	holin	lysis
UniRef90	UHGV-0334723_41	UniRef90_A0A6L7IPY0	92.0	8.37e-23	Holin	N/A
eggNOG-mapper	UHGV-0334723_41	1392487.JIAD01000001_gene507	69.3	0.0000000000000168	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0334723_41	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0334723_41	PF16945	N/A	N/A	N/A	N/A
UniRef90	UHGV-0334723_42	UniRef90_B6GDG3	216.0	0	Peptidase_C39_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0334723_42	1410632.JHWW01000001_gene1201	55.5	0.000000868	Papain-like cysteine protease AvrRpt2	N/A
Pfam	UHGV-0334723_42	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
COG	UHGV-0334723_42	COG0768	N/A	N/A	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	N/A
structural_annotation	UHGV-0334723_42	PF03412,NF033920,COG4990	N/A	N/A	N/A	N/A
KOfam	UHGV-0334723_44	K06400	324.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0334723_44	phrog_95	297.2	0	integrase	integration and excision
UniRef90	UHGV-0334723_44	UniRef90_UPI0013EB83BC	788.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0334723_44	742722.HMPREF9463_00190	333.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0334723_44	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0334723_44	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0334723_44	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0334723_44	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
KOfam	UHGV-0334723_46	K18831	41.7	0.000000000021	higA; HTH-type transcriptional regulator / antitoxin HigA	N/A
UniRef90	UHGV-0334723_46	UniRef90_A0A1Y3UMU9	129.0	9.89e-38	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0334723_46	1280692.AUJL01000022_gene552	50.1	0.00000122	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0334723_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0334723_46	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
UniRef90	UHGV-0334723_47	UniRef90_A0A1Y3UQK8	101.0	2.71e-26	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0334723_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
eggNOG-mapper	UHGV-0334723_51	521003.COLINT_02311	187.0	0	N/A	N/A
eggNOG-mapper	UHGV-0334723_52	711393.AYRX01000095_gene3600	90.1	1.08e-19	Archaeal holliday junction resolvase (hjc)	N/A
PHROG	UHGV-0334723_56	phrog_155	54.7	0.0000000000000022	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0334723_56	1329516.JPST01000018_gene2622	53.1	0.00000106	ERF superfamily	N/A
Pfam	UHGV-0334723_56	PF04404	N/A	N/A	ERF superfamily	ERF