UHGV-0340229 (vOTU-050809)

Viral Genome: UHGV-0340229

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0340229
vOTU ID	vOTU-050809
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_58273_round13~760706
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.979
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	43.05
Jumbo phage	No

Genome content
Genome length (bp)	36,552
GC content	42.82%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	93%
Average CDS length (bps)	656.31
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0340229_1	phrog_2329	62.4	6.3e-18	N/A	unknown function
UniRef90	UHGV-0340229_1	UniRef90_UPI0018A8B4F7	108.0	4.79e-30	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
structural_annotation	UHGV-0340229_1	PF04014,COG2336	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0340229_2	478749.BRYFOR_07651	185.0	0	N/A	N/A
structural_annotation	UHGV-0340229_2	TIGR03826	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0340229_3	cluster_11486	66.2	1.01e-16	NA	N/A
KOfam	UHGV-0340229_4	K07273	184.2	0	acm; lysozyme	N/A
PHROG	UHGV-0340229_4	phrog_291	144.5	8.60397e-43	endolysin	lysis
UniRef90	UHGV-0340229_4	UniRef90_D4M5A7	699.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-0340229_4	515620.EUBELI_01316	204.0	0	Glycoside Hydrolase Family 25-like lysozyme endolysin	N/A
Pfam	UHGV-0340229_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0340229_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0340229_4	PF01183,NF003627,COG3757,COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0340229_5	PF13384,NF001074,COG3677	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_6	phrog_37799	72.9	1.5e-21	N/A	unknown function
UniRef90	UHGV-0340229_6	UniRef90_A0A373N7C7	285.0	0	Protein utxA	N/A
eggNOG-mapper	UHGV-0340229_6	411470.RUMGNA_02086	141.0	8.52003e-41	N/A	N/A
Pfam	UHGV-0340229_6	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0340229_6	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0340229_6	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0340229_6	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_7	phrog_20274	143.0	1.3999e-42	N/A	unknown function
UniRef90	UHGV-0340229_7	UniRef90_A0A173TUK0	205.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0340229_7	1235799.C818_04238	157.0	0	Putative ABC-transporter type IV	N/A
Pfam	UHGV-0340229_7	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-0340229_7	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0340229_7	PF06541,COG4905	N/A	N/A	N/A	N/A
UniRef90	UHGV-0340229_8	UniRef90_UPI001BC63046	147.0	2.93999e-40	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-0340229_8	1235799.C818_04237	280.0	0	N/A	N/A
structural_annotation	UHGV-0340229_8	PF14301	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0340229_9	553973.CLOHYLEM_06551	59.7	0.00000000334	to Mitochondrial intermediate peptidase K01410	N/A
COG	UHGV-0340229_9	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-0340229_9	NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_10	phrog_819	61.9	8.8e-18	tail protein	tail
UniRef90	UHGV-0340229_10	UniRef90_UPI001A9A6571	320.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0340229_10	877414.ATWA01000019_gene2051	81.3	0.000000000000035	N/A	N/A
Pfam	UHGV-0340229_10	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0340229_10	PF05737	N/A	N/A	N/A	N/A
KOfam	UHGV-0340229_11	K16628	88.5	1.4e-26	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0340229_11	phrog_819	125.3	3e-38	tail protein	tail
UniRef90	UHGV-0340229_11	UniRef90_UPI0011C154AF	306.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0340229_11	290402.Cbei_3387	181.0	0	N/A	N/A
Pfam	UHGV-0340229_11	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0340229_12	phrog_16164	75.2	5.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0340229_12	33035.JPJF01000093_gene2236	163.0	0	N/A	N/A
structural_annotation	UHGV-0340229_12	PF10651,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-0340229_13	K07296	43.0	0.0000000000051	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-0340229_13	phrog_10972	44.9	0.0000000000015	tail fiber protein	tail
UniRef90	UHGV-0340229_13	UniRef90_A0A374E9Q0	397.0	0	Collagen-like protein	N/A
Pfam	UHGV-0340229_13	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0340229_13	PF10651,NF007636,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_14	phrog_14030	135.2	3.09999e-40	N/A	unknown function
UniRef90	UHGV-0340229_14	UniRef90_A0A373N7H3	620.0	0	Peptidase M23	N/A
eggNOG-mapper	UHGV-0340229_14	33035.JPJF01000093_gene2240	328.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0340229_14	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0340229_14	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-0340229_14	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0340229_14	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_15	phrog_13289	401.3	0	tail protein	tail
UniRef90	UHGV-0340229_15	UniRef90_D4M5A0	1053.0	0	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-0340229_15	1235798.C817_02568	481.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0340229_15	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0340229_15	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0340229_15	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0340229_15	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_16	phrog_33	66.4	7.2e-19	distal tail protein Dit	tail
UniRef90	UHGV-0340229_16	UniRef90_UPI000E50043B	359.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0340229_16	1235798.C817_04593	207.0	0	phage tail	N/A
COG	UHGV-0340229_16	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0340229_16	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_17	phrog_1272	215.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0340229_17	UniRef90_A0A373N7M8	1124.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0340229_17	1035184.HMPREF1042_1328	309.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-0340229_17	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0340229_17	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0340229_17	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0340229_20	phrog_88	100.8	1.4e-29	major tail protein	tail
UniRef90	UHGV-0340229_20	UniRef90_D4M596	377.0	0	Phage major tail protein, phi13 family	N/A
Pfam	UHGV-0340229_20	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0340229_20	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0340229_20	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_21	phrog_5	47.3	0.0000000000005	tail completion or Neck1 protein	connector
UniRef90	UHGV-0340229_21	UniRef90_D4M595	195.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0340229_21	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0340229_21	TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0340229_22	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0340229_23	UniRef90_D4M593	203.0	0	Phage head-tail adaptor, putative, SPP1 family	N/A
NCBIFam	UHGV-0340229_23	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0340229_23	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_25	phrog_10	85.5	5.4e-25	major head protein	head and packaging
UniRef90	UHGV-0340229_25	UniRef90_D4M591	715.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-0340229_25	1232452.BAIB02000007_gene1625	478.0	0	Phage capsid family	N/A
Pfam	UHGV-0340229_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0340229_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0340229_25	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0340229_25	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0340229_26	K01358	113.8	2.1e-33	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0340229_26	phrog_94	177.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0340229_26	UniRef90_D4M590	496.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0340229_26	1235792.C808_00085	207.0	0	Clp protease	N/A
Pfam	UHGV-0340229_26	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0340229_26	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0340229_26	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_27	phrog_12	70.0	1.7e-20	portal protein	head and packaging
UniRef90	UHGV-0340229_27	UniRef90_UPI00156D5DC9	590.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0340229_27	1232452.BAIB02000007_gene1627	287.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0340229_27	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0340229_27	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0340229_27	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_28	phrog_9	259.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0340229_28	UniRef90_D4M588	1117.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0340229_28	1232452.BAIB02000007_gene1629	529.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0340229_28	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0340229_28	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0340229_28	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0340229_28	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_29	phrog_5110	101.9	3.7e-30	terminase small subunit	head and packaging
UniRef90	UHGV-0340229_29	UniRef90_A0A1C5LZF0	100.0	4.87e-25	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0340229_29	1211817.CCAT010000008_gene938	82.4	2.52e-18	Phage terminase, small subunit	N/A
Pfam	UHGV-0340229_29	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0340229_29	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0340229_29	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0340229_30	K07451	51.9	0.000000000000016	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0340229_30	phrog_119	81.5	1.1e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0340229_30	UniRef90_D4M587	280.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0340229_30	1232452.BAIB02000007_gene1631	93.6	7.7e-23	HNH nucleases	N/A
Pfam	UHGV-0340229_30	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0340229_30	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0340229_30	PF09889,COG4068	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_31	phrog_36	88.5	7.8e-26	transcriptional regulator	transcription regulation
UniRef90	UHGV-0340229_31	UniRef90_UPI001899709D	221.0	0	N/A	N/A
eggNOG-mapper	UHGV-0340229_31	658655.HMPREF0988_02569	216.0	0	sigma factor activity	N/A
Pfam	UHGV-0340229_31	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0340229_31	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0340229_31	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0340229_33	K18830	42.7	0.000000000012	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0340229_33	phrog_8	42.4	0.000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-0340229_33	UniRef90_A0A844KFT8	137.0	4.52003e-41	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0340229_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0340229_33	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0340229_35	phrog_7566	115.1	2.4e-34	N/A	unknown function
eggNOG-mapper	UHGV-0340229_35	665950.HMPREF1025_02547	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0340229_36	1196322.A370_05726	66.2	0.000000000000411	N/A	N/A
PHROG	UHGV-0340229_37	phrog_15077	92.9	6.5e-27	N/A	unknown function
UniRef90	UHGV-0340229_37	UniRef90_A0A3A6HZA9	235.0	0	N/A	N/A
eggNOG-mapper	UHGV-0340229_37	1280698.AUJS01000007_gene1019	377.0	0	N/A	N/A
structural_annotation	UHGV-0340229_37	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_38	phrog_8470	230.3	0	N/A	unknown function
UniRef90	UHGV-0340229_38	UniRef90_UPI001C01E393	584.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0340229_38	1280698.AUJS01000007_gene1018	853.0	0	N/A	N/A
Pfam	UHGV-0340229_38	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0340229_38	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_39	phrog_4433	68.3	1.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0340229_39	1280698.AUJS01000007_gene1017	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0340229_40	1280698.AUJS01000007_gene1016	224.0	0	N/A	N/A
KOfam	UHGV-0340229_41	K03469	63.2	5.9e-18	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0340229_41	phrog_531	63.5	3.9e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0340229_41	UniRef90_D4M578	289.0	0	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-0340229_41	665950.HMPREF1025_02551	152.0	1.4013e-45	RNase H	N/A
Pfam	UHGV-0340229_41	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0340229_41	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0340229_41	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_42	phrog_3584	152.5	2.8026e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0340229_42	665950.HMPREF1025_02552	315.0	0	N/A	N/A
structural_annotation	UHGV-0340229_42	PF21578,NF041486	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0340229_46	PF20037,COG3212	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0340229_47	COG1321	N/A	N/A	N/A	N/A
KOfam	UHGV-0340229_49	K18830	68.5	1.2e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0340229_49	phrog_4	51.6	0.000000000000024	transcriptional repressor	transcription regulation
UniRef90	UHGV-0340229_49	UniRef90_A0A1Q6K9L5	232.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0340229_49	1280698.AUJS01000007_gene1002	154.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0340229_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0340229_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0340229_49	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0340229_50	K10716	136.5	2.29999e-40	kch, trkA, mthK, pch; voltage-gated potassium channel	N/A
PHROG	UHGV-0340229_50	phrog_7872	199.2	0	N/A	unknown function
UniRef90	UHGV-0340229_50	UniRef90_D4M567	459.0	0	Ion channel	N/A
eggNOG-mapper	UHGV-0340229_50	411459.RUMOBE_00964	270.0	0	Ion channel	N/A
Pfam	UHGV-0340229_50	PF07885	N/A	N/A	Ion channel	Ion_trans_2
COG	UHGV-0340229_50	COG1226	N/A	N/A	Voltage-gated potassium channel Kch	N/A
structural_annotation	UHGV-0340229_50	PF07885,NF040645	N/A	N/A	N/A	N/A
PHROG	UHGV-0340229_51	phrog_10934	108.3	3.9e-32	N/A	unknown function
eggNOG-mapper	UHGV-0340229_51	742722.HMPREF9463_00385	105.0	5.41e-24	N/A	N/A
KOfam	UHGV-0340229_52	K06400	249.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0340229_52	phrog_95	260.4	0	integrase	integration and excision
UniRef90	UHGV-0340229_52	UniRef90_A0A374E9M4	1022.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0340229_52	97139.C824_00068	715.0	0	Recombinase	N/A
Pfam	UHGV-0340229_52	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0340229_52	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0340229_52	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0340229_52	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A