UHGV-0343791 (vOTU-063576)

Viral Genome: UHGV-0343791

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0343791
vOTU ID	vOTU-063576
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_28490_round13~6054808
Associated BioSample	SAMN09278511
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.81 (High-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.982
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	56.92
Jumbo phage	No

Genome content
Genome length (bp)	35,887
GC content	42.39%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	91%
Average CDS length (bps)	628.39
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 95.81)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0343791_1	phrog_23452	254.7	0	N/A	unknown function
UniRef90	UHGV-0343791_1	UniRef90_A0A174L7Q4	229.0	0	Zinc D-Ala-D-Ala carboxypeptidase	N/A
eggNOG-mapper	UHGV-0343791_1	411470.RUMGNA_03624	261.0	0	N/A	N/A
Pfam	UHGV-0343791_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0343791_1	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0343791_1	PF01471,COG3409	N/A	N/A	N/A	N/A
KOfam	UHGV-0343791_2	K01447	62.4	8.6e-18	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0343791_2	phrog_833	195.0	0	endolysin	lysis
UniRef90	UHGV-0343791_2	UniRef90_A0A2N5Q1W5	648.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0343791_2	1232453.BAIF02000059_gene1616	513.0	0	Ami_2	N/A
Pfam	UHGV-0343791_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0343791_2	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0343791_2	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_3	phrog_918	120.3	5.6e-36	N/A	unknown function
UniRef90	UHGV-0343791_3	UniRef90_UPI001CF89D06	145.0	1.03696e-43	N/A	N/A
eggNOG-mapper	UHGV-0343791_3	1140001.I571_01827	122.0	3.06e-35	N/A	N/A
Pfam	UHGV-0343791_3	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0343791_3	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_4	phrog_199	78.9	5.3e-23	holin	lysis
UniRef90	UHGV-0343791_4	UniRef90_A0A2N5P5I5	280.0	0	Holin	N/A
eggNOG-mapper	UHGV-0343791_4	1469948.JPNB01000001_gene536	191.0	0	TIGRFAM toxin secretion phage lysis holin	N/A
Pfam	UHGV-0343791_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0343791_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0343791_4	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0343791_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0343791_5	K16617	80.1	9.4e-38	COL13A; collagen type XIII alpha	N/A
PHROG	UHGV-0343791_5	phrog_588	532.4	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-0343791_5	UniRef90_UPI000467D60B	1316.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0343791_5	411470.RUMGNA_02230	975.0	0	N/A	N/A
Pfam	UHGV-0343791_5	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0343791_5	PF21470	N/A	N/A	Minor structural protein 5-like, C-terminal domain	BppU-like_C
structural_annotation	UHGV-0343791_5	PF14594,PF08931,PF13895,TIGR01665,TIGR04488,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_6	phrog_202	317.3	0	distal tail protein Dit	tail
UniRef90	UHGV-0343791_6	UniRef90_A7B3U8	935.0	0	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-0343791_6	411470.RUMGNA_02229	935.0	0	N/A	N/A
Pfam	UHGV-0343791_6	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0343791_6	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0343791_6	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0343791_6	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_7	phrog_6900	254.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0343791_7	UniRef90_UPI001C8EB1BF	113.0	3.15e-22	tape measure protein	N/A
eggNOG-mapper	UHGV-0343791_7	742765.HMPREF9457_02136	342.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0343791_7	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0343791_7	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0343791_8	1235792.C808_05376	68.2	0.00000000000000571	N/A	N/A
structural_annotation	UHGV-0343791_8	PF10122,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_9	phrog_706	160.9	0	N/A	unknown function
UniRef90	UHGV-0343791_9	UniRef90_UPI00195660EF	254.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0343791_9	658655.HMPREF0988_02553	236.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0343791_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0343791_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_10	phrog_4450	123.8	8.7e-37	N/A	unknown function
UniRef90	UHGV-0343791_10	UniRef90_UPI001C0AC01D	79.7	6.85e-17	AP endonuclease	N/A
eggNOG-mapper	UHGV-0343791_10	1235792.C808_05374	140.0	1.87003e-41	N/A	N/A
Pfam	UHGV-0343791_10	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0343791_10	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_11	phrog_3099	156.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0343791_11	411470.RUMGNA_02224	325.0	0	N/A	N/A
structural_annotation	UHGV-0343791_11	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_12	phrog_3266	155.5	0	tail completion	connector
eggNOG-mapper	UHGV-0343791_12	411470.RUMGNA_02223	271.0	0	N/A	N/A
structural_annotation	UHGV-0343791_12	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_13	phrog_556	139.5	7.79963e-42	minor head protein	head and packaging
UniRef90	UHGV-0343791_13	UniRef90_UPI001C8E2A32	212.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0343791_13	411470.RUMGNA_02222	217.0	0	N/A	N/A
structural_annotation	UHGV-0343791_13	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_14	phrog_3366	93.1	8.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0343791_14	411470.RUMGNA_02221	217.0	0	N/A	N/A
Pfam	UHGV-0343791_14	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0343791_14	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_15	phrog_541	76.5	3.3e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0343791_15	411462.DORLON_00785	75.9	6.51e-16	N/A	N/A
PHROG	UHGV-0343791_16	phrog_10972	40.3	0.000000000034	tail fiber protein	tail
UniRef90	UHGV-0343791_16	UniRef90_UPI001D05A857	137.0	9.55e-40	head fiber protein	N/A
eggNOG-mapper	UHGV-0343791_16	1232443.BAIA02000078_gene28	64.7	0.00000000000723	domain, Protein	N/A
Pfam	UHGV-0343791_16	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
COG	UHGV-0343791_16	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-0343791_17	phrog_422	224.8	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0343791_17	658655.HMPREF0988_02560	416.0	0	N/A	N/A
structural_annotation	UHGV-0343791_17	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_18	phrog_194	76.3	5.5e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-0343791_18	UniRef90_A0A6N2UWT0	134.0	2.05e-36	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0343791_18	1304866.K413DRAFT_3037	92.8	4.79e-21	Phage minor structural protein GP20	N/A
Pfam	UHGV-0343791_18	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0343791_18	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_19	phrog_581	301.2	0	minor head protein	head and packaging
UniRef90	UHGV-0343791_19	UniRef90_A0A2N5PKG3	753.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0343791_19	1235799.C818_04219	526.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0343791_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0343791_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0343791_19	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_20	phrog_533	299.1	0	portal protein	head and packaging
UniRef90	UHGV-0343791_20	UniRef90_A0A2N5PKH7	841.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0343791_20	658655.HMPREF0988_02564	495.0	0	N/A	N/A
structural_annotation	UHGV-0343791_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0343791_21	K06909	96.3	3.8e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0343791_21	phrog_2	97.8	1.9e-28	terminase large subunit	head and packaging
UniRef90	UHGV-0343791_21	UniRef90_A0A2N5PKF3	795.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0343791_21	411470.RUMGNA_02211	632.0	0	N/A	N/A
Pfam	UHGV-0343791_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0343791_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0343791_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0343791_21	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_22	phrog_309	205.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-0343791_22	UniRef90_A0A2N5PKF8	305.0	0	Transposase	N/A
eggNOG-mapper	UHGV-0343791_22	411470.RUMGNA_02210	206.0	0	transposase activity	N/A
Pfam	UHGV-0343791_22	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-0343791_22	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0343791_22	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_23	phrog_36	59.8	6.2e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0343791_23	UniRef90_A0A412MDT8	133.0	1.94e-37	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0343791_23	411462.DORLON_00800	114.0	1.43e-30	N/A	N/A
Pfam	UHGV-0343791_23	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0343791_23	PF04545,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_24	phrog_7024	82.5	3.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-0343791_24	994573.T472_0211090	52.0	0.0000000849	N/A	N/A
eggNOG-mapper	UHGV-0343791_26	411470.RUMGNA_02203	222.0	0	N/A	N/A
PHROG	UHGV-0343791_28	phrog_15198	54.6	4.9e-22	N/A	unknown function
UniRef90	UHGV-0343791_28	UniRef90_A0A8B3BTL4	77.4	0.00000000000000371	N/A	N/A
eggNOG-mapper	UHGV-0343791_28	658655.HMPREF0988_00863	55.8	0.000000221	N/A	N/A
PHROG	UHGV-0343791_30	phrog_599	42.7	0.000000000011	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0343791_30	UniRef90_U2DJA0	105.0	2.61e-28	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0343791_30	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0343791_30	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0343791_30	PF14354,TIGR03655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0343791_31	97139.C824_00033	53.5	0.0000000802	N/A	N/A
structural_annotation	UHGV-0343791_32	NF041290	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_33	phrog_23374	61.3	1.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0343791_33	1256908.HMPREF0373_00664	74.3	6.69e-17	N/A	N/A
PHROG	UHGV-0343791_35	phrog_8841	624.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0343791_35	UniRef90_UPI00156EF603	1133.0	0	N/A	N/A
eggNOG-mapper	UHGV-0343791_35	476272.RUMHYD_01742	842.0	0	N/A	N/A
Pfam	UHGV-0343791_35	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0343791_35	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0343791_35	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0343791_35	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0343791_36	K02316	70.0	3.7e-20	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0343791_36	phrog_11992	174.0	0	N/A	unknown function
UniRef90	UHGV-0343791_36	UniRef90_UPI00156FEB22	333.0	0	CHC2 zinc finger domain-containing protein	N/A
eggNOG-mapper	UHGV-0343791_36	1304866.K413DRAFT_0824	208.0	0	CHC2 zinc finger	N/A
PADLOC	UHGV-0343791_36	drt-UG29	57.2	1.8e-16	DRT	DRT
Pfam	UHGV-0343791_36	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0343791_36	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0343791_36	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_37	phrog_3490	164.1	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0343791_37	UniRef90_UPI00156FB923	338.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0343791_37	1256908.HMPREF0373_00660	233.0	0	N/A	N/A
Pfam	UHGV-0343791_37	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0343791_37	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_38	phrog_18107	270.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0343791_38	1256908.HMPREF0373_00659	251.0	0	N/A	N/A
structural_annotation	UHGV-0343791_38	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_39	phrog_2872	248.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0343791_39	UniRef90_UPI0015715A02	437.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0343791_39	1256908.HMPREF0373_00658	347.0	0	AAA domain	N/A
Pfam	UHGV-0343791_39	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0343791_39	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_41	phrog_30234	91.6	4.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0343791_41	1304866.K413DRAFT_3014	56.6	0.000000000516	N/A	N/A
eggNOG-mapper	UHGV-0343791_46	1235790.C805_00014	50.4	0.0000000694	N/A	N/A
KOfam	UHGV-0343791_47	K07741	111.0	2.6e-32	antB; anti-repressor protein	N/A
PHROG	UHGV-0343791_47	phrog_63	218.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0343791_47	UniRef90_UPI0015706F54	464.0	0	phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0343791_47	1582156.A0A0A8WJ71_9CAUD	236.0	0	DNA binding	N/A
Pfam	UHGV-0343791_47	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0343791_47	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0343791_47	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
structural_annotation	UHGV-0343791_47	PF03374,PF09669,TIGR02681,COG3645,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0343791_49	K18830	44.3	0.00000000000041	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
UniRef90	UHGV-0343791_49	UniRef90_A0A2N5NVN2	238.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0343791_49	1235790.C805_00012	126.0	5.56e-36	Helix-turn-helix domain	N/A
Pfam	UHGV-0343791_49	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0343791_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0343791_49	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0343791_50	411461.DORFOR_00034	150.0	1.26117e-44	N/A	N/A
structural_annotation	UHGV-0343791_50	PF11631,TIGR03066	N/A	N/A	N/A	N/A
PHROG	UHGV-0343791_51	phrog_7115	151.5	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0343791_51	UniRef90_UPI001CD3F351	236.0	0	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-0343791_51	471855.Shel_11460	147.0	5.04467e-44	Bacterial PH domain	N/A
Pfam	UHGV-0343791_51	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0343791_51	PF08000,MF_00437	N/A	N/A	N/A	N/A
KOfam	UHGV-0343791_52	K06400	380.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0343791_52	phrog_95	393.6	0	integrase	integration and excision
UniRef90	UHGV-0343791_52	UniRef90_UPI0011853F05	947.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0343791_52	411460.RUMTOR_02053	717.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0343791_52	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0343791_52	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0343791_52	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0343791_52	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0343791_52	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A