UHGV-0344423 (vOTU-088128)

Viral Genome: UHGV-0344423

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0344423
vOTU ID	vOTU-088128
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_106073_round13~2274093
Associated BioSample	SAMN07795011
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	79.68 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9796
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	73.81
Jumbo phage	No

Genome content
Genome length (bp)	32,410
GC content	41.91%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	93%
Average CDS length (bps)	547.47
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 79.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0344423_1	908340.HMPREF9406_0812	202.0	0	N/A	N/A
PHROG	UHGV-0344423_2	phrog_38417	45.6	0.0000000000008	hyaluronidase	other
PHROG	UHGV-0344423_4	phrog_5555	182.4	0	tail protein	tail
UniRef90	UHGV-0344423_4	UniRef90_UPI001C394D99	1075.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0344423_4	999413.HMPREF1094_00205	879.0	0	N/A	N/A
Pfam	UHGV-0344423_4	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0344423_4	PF00404	N/A	N/A	Dockerin type I domain	Dockerin_1
NCBIFam	UHGV-0344423_4	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0344423_4	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0344423_4	PF06605,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-0344423_5	UniRef90_UPI00085CD9AD	64.3	0.0000000081	phage tail family protein	N/A
eggNOG-mapper	UHGV-0344423_5	1280689.AUJC01000007_gene3307	70.1	0.00000000000881	phage tail	N/A
COG	UHGV-0344423_5	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0344423_5	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_6	phrog_58	272.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0344423_6	UniRef90_G1VS78	1134.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0344423_6	999413.HMPREF1094_00207	1171.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0344423_6	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0344423_6	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0344423_6	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0344423_6	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_7	phrog_706	142.7	2.10055e-42	N/A	unknown function
UniRef90	UHGV-0344423_7	UniRef90_UPI001E5E5ED8	182.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0344423_7	999413.HMPREF1094_00208	385.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0344423_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0344423_7	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0344423_8	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_9	phrog_3099	88.4	8.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0344423_9	1321782.HMPREF1986_02273	71.6	0.000000000000399	N/A	N/A
UniRef90	UHGV-0344423_10	UniRef90_UPI001430E854	144.0	2.04996e-41	ABC transporter permease	N/A
structural_annotation	UHGV-0344423_10	PF16807	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_11	phrog_556	70.1	2.8e-20	minor head protein	head and packaging
UniRef90	UHGV-0344423_11	UniRef90_UPI001BA7D0C3	103.0	9.76e-26	minor capsid protein	N/A
eggNOG-mapper	UHGV-0344423_11	999413.HMPREF1094_00212	275.0	0	Minor capsid protein	N/A
Pfam	UHGV-0344423_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0344423_11	PF11114,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0344423_12	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_13	phrog_541	41.8	0.000000000017	head-tail adaptor	connector
PHROG	UHGV-0344423_14	phrog_10	162.3	0	major head protein	head and packaging
UniRef90	UHGV-0344423_14	UniRef90_N9VBL2	771.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0344423_14	999413.HMPREF1094_00215	771.0	0	Phage capsid family	N/A
Pfam	UHGV-0344423_14	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0344423_14	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0344423_14	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0344423_14	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_15	phrog_194	91.9	8.8e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0344423_15	UniRef90_UPI001EDCE3E2	264.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0344423_15	999413.HMPREF1094_00216	336.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0344423_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0344423_15	PF06810	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0344423_16	999413.HMPREF1094_00217	128.0	3.21e-38	N/A	N/A
PHROG	UHGV-0344423_18	phrog_581	302.4	0	minor head protein	head and packaging
UniRef90	UHGV-0344423_18	UniRef90_A0A223MHV7	697.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0344423_18	999413.HMPREF1094_00219	1038.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0344423_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0344423_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0344423_18	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_19	phrog_533	386.3	0	portal protein	head and packaging
UniRef90	UHGV-0344423_19	UniRef90_C0CSR5	540.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0344423_19	999413.HMPREF1094_00220	906.0	0	phage minor capsid protein	N/A
Pfam	UHGV-0344423_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0344423_19	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0344423_20	K06909	68.7	9.1e-20	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0344423_20	phrog_2	94.7	1.6e-27	terminase large subunit	head and packaging
UniRef90	UHGV-0344423_20	UniRef90_N9VB01	918.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0344423_20	999413.HMPREF1094_00221	918.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0344423_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0344423_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0344423_20	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0344423_21	K07474	94.9	1.7e-27	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0344423_21	phrog_2606	273.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0344423_21	UniRef90_UPI001E415A90	491.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0344423_21	411461.DORFOR_01162	216.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0344423_21	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0344423_21	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0344423_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0344423_21	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_22	phrog_419	87.5	1.9e-25	N/A	unknown function
UniRef90	UHGV-0344423_22	UniRef90_A0A7U8FU65	80.9	6.96e-18	Prophage Lp2 protein 33	N/A
eggNOG-mapper	UHGV-0344423_22	565664.EFXG_01161	80.9	1.17e-18	N/A	N/A
structural_annotation	UHGV-0344423_22	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_23	phrog_36	40.2	0.000000000058	transcriptional regulator	transcription regulation
UniRef90	UHGV-0344423_23	UniRef90_UPI00093217BF	86.7	6.97e-19	sigma-70 family RNA polymerase sigma factor	N/A
structural_annotation	UHGV-0344423_23	PF04545,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_25	phrog_2776	64.9	3.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0344423_25	697329.Rumal_3412	181.0	0	N/A	N/A
structural_annotation	UHGV-0344423_25	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0344423_26	PF18300,MF_00085,NF003076	N/A	N/A	N/A	N/A
KOfam	UHGV-0344423_27	K03111	156.3	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0344423_27	phrog_44	161.1	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0344423_27	UniRef90_A0A099I4V0	254.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0344423_27	658659.HMPREF0983_02345	255.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0344423_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0344423_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0344423_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0344423_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0344423_27	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0344423_28	1232449.BAHV02000016_gene1829	190.0	0	N/A	N/A
KOfam	UHGV-0344423_31	K00571	120.4	2.1e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0344423_31	phrog_67	92.8	7e-29	DNA methyltransferase	other
UniRef90	UHGV-0344423_31	UniRef90_G1VS51	509.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0344423_31	1123315.AUIP01000014_gene1936	355.0	0	DNA modification methylase DNA replication, recombination, and repair	N/A
PADLOC	UHGV-0344423_31	MTase_II_00157	93.8	8e-29	Type II methyltransferase	RM
Pfam	UHGV-0344423_31	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0344423_31	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0344423_31	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0344423_32	K00571	110.2	2.5e-32	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0344423_32	phrog_12862	190.0	0	N/A	unknown function
UniRef90	UHGV-0344423_32	UniRef90_G1VS50	427.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0344423_32	755731.Clo1100_1145	318.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0344423_32	MTase_II_00037	225.4	0	Type II methyltransferase	RM
Pfam	UHGV-0344423_32	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0344423_32	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0344423_32	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0344423_33	K02086	48.4	0.000000000000012	dnaD; DNA replication protein	N/A
PHROG	UHGV-0344423_33	phrog_2514	94.5	7.9e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0344423_33	UniRef90_G1VS49	468.0	0	DnaB_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0344423_33	428127.EUBDOL_01245	130.0	3.38e-34	DnaD domain protein	N/A
Pfam	UHGV-0344423_33	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0344423_33	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0344423_33	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0344423_35	phrog_190	105.6	4.8e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0344423_35	UniRef90_UPI000E4EB16B	157.0	0	N/A	N/A
eggNOG-mapper	UHGV-0344423_35	445974.CLORAM_02947	108.0	3.12e-29	N/A	N/A
Pfam	UHGV-0344423_35	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0344423_35	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_36	phrog_72	50.0	0.000000000000046	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0344423_36	428127.EUBDOL_01246	130.0	5.83e-36	N/A	N/A
Pfam	UHGV-0344423_36	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0344423_36	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_37	phrog_1934	122.1	3e-36	N/A	unknown function
UniRef90	UHGV-0344423_37	UniRef90_UPI001646AC4F	165.0	0	zinc-finger-containing protein	N/A
eggNOG-mapper	UHGV-0344423_37	397290.C810_01488	163.0	0	zinc-finger-containing domain	N/A
Pfam	UHGV-0344423_37	PF11672	N/A	N/A	zinc-finger-containing domain	DUF3268
structural_annotation	UHGV-0344423_37	PF11672	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_38	phrog_7566	94.1	8.8e-28	N/A	unknown function
UniRef90	UHGV-0344423_38	UniRef90_A0A7X5CEC2	77.0	1.77e-16	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0344423_38	508419.F8J187_9CAUD	111.0	5.67e-31	N/A	N/A
PHROG	UHGV-0344423_39	phrog_659	211.3	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0344423_39	UniRef90_UPI0008EFC9DC	534.0	0	N/A	N/A
eggNOG-mapper	UHGV-0344423_39	1229517.AMFD01000025_gene931	186.0	0	N/A	N/A
Pfam	UHGV-0344423_39	PF06378	N/A	N/A	N/A	DUF1071
PHROG	UHGV-0344423_40	phrog_674	86.0	3.3e-25	N/A	unknown function
UniRef90	UHGV-0344423_40	UniRef90_UPI0008E56157	509.0	0	N/A	N/A
Pfam	UHGV-0344423_40	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0344423_40	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0344423_44	phrog_463	211.4	0	anti-repressor	transcription regulation
UniRef90	UHGV-0344423_44	UniRef90_UPI001C37F8EE	487.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0344423_44	431943.CKL_1910	148.0	7.33005e-41	Phage antirepressor protein	N/A
Pfam	UHGV-0344423_44	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0344423_44	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0344423_44	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0344423_44	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-0344423_51	K07741	217.7	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0344423_51	phrog_63	167.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0344423_51	UniRef90_UPI000E49576D	414.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0344423_51	1123263.AUKY01000076_gene1778	315.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0344423_51	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0344423_51	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0344423_51	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0344423_51	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0344423_53	K22299	50.9	0.000000000000036	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0344423_53	phrog_8	43.3	0.0000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-0344423_53	UniRef90_UPI001C21E71B	241.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0344423_53	1235800.C819_02266	81.3	6.08e-18	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0344423_53	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0344423_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0344423_53	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A