UHGV-0351425 (vOTU-024026)

Viral Genome: UHGV-0351425

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0351425
vOTU ID	vOTU-024026
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR1910914_119_7032_round1256~3746052
Associated BioSample	SAMN03398792
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	81.77 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.99
Jumbo phage	No

Genome content
Genome length (bp)	33,761
GC content	37.41%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	42
CDS density	95%
Average CDS length (bps)	759.86
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 81.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0351425_1	phrog_15768	86.3	5.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0351425_1	158189.SpiBuddy_2340	79.7	2.86e-16	N/A	N/A
PHROG	UHGV-0351425_2	phrog_9804	74.5	1.5e-21	N/A	unknown function
UniRef90	UHGV-0351425_2	UniRef90_A0A3A9I1A3	55.1	0.00000908	Inhibitor_G39P domain-containing protein	N/A
structural_annotation	UHGV-0351425_2	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0351425_5	K03111	143.2	3.09967e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0351425_5	phrog_44	124.9	7e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0351425_5	UniRef90_UPI001D069DF3	228.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0351425_5	879309.HMPREF9199_0149	195.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0351425_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0351425_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0351425_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0351425_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0351425_5	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0351425_6	PF11305,MF_01360	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_7	phrog_1672	48.8	0.000000000000083	N/A	unknown function
UniRef90	UHGV-0351425_7	UniRef90_F5L204	116.0	1.17e-30	Conserved domain protein	N/A
structural_annotation	UHGV-0351425_8	PF11305,MF_01360	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_10	phrog_2776	48.8	0.000000000000098	N/A	unknown function
UniRef90	UHGV-0351425_10	UniRef90_A0A2S7ZCT0	159.0	0	DNA repair protein MmcB-related protein	N/A
Pfam	UHGV-0351425_10	PF06319	N/A	N/A	DNA repair protein MmcB-like	MmcB-like
structural_annotation	UHGV-0351425_10	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
KOfam	UHGV-0351425_11	K00571	118.7	7.1e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0351425_11	phrog_67	97.2	1.1e-29	DNA methyltransferase	other
UniRef90	UHGV-0351425_11	UniRef90_UPI00196047F8	509.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0351425_11	749222.Nitsa_1817	382.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0351425_11	MTase_II_00157	101.7	1.5e-30	Type II methyltransferase	RM
Pfam	UHGV-0351425_11	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0351425_11	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0351425_11	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_12	phrog_918	94.6	5.5e-28	N/A	unknown function
UniRef90	UHGV-0351425_12	UniRef90_UPI001CACBF45	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0351425_12	1401067.HMPREF0872_03440	103.0	5.77e-28	N/A	N/A
Pfam	UHGV-0351425_12	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0351425_12	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_13	phrog_244	52.8	0.0000000000000085	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0351425_13	UniRef90_A0A841R0Q1	111.0	1e-29	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0351425_13	1200557.JHWV01000001_gene280	111.0	3.09e-30	N/A	N/A
structural_annotation	UHGV-0351425_13	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0351425_14	K01520	61.6	1.4e-17	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0351425_14	phrog_135	73.5	3.3e-21	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0351425_14	UniRef90_UPI001D0616FF	157.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0351425_14	66692.ABC2847	79.3	1.76e-17	deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
Pfam	UHGV-0351425_14	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-0351425_14	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0351425_14	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0351425_16	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_18	phrog_21026	64.7	1.5e-19	N/A	unknown function
PHROG	UHGV-0351425_20	phrog_36	49.6	0.00000000000008	transcriptional regulator	transcription regulation
UniRef90	UHGV-0351425_20	UniRef90_D1YMC4	85.5	2.8e-18	Phage transcriptional regulator, ArpU family	N/A
eggNOG-mapper	UHGV-0351425_20	706434.HMPREF9429_00383	51.2	0.00000503	N/A	N/A
structural_annotation	UHGV-0351425_20	PF07374,TIGR02984	N/A	N/A	N/A	N/A
KOfam	UHGV-0351425_23	K07474	132.6	5.3e-39	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0351425_23	phrog_51	134.9	4.1e-40	terminase small subunit	head and packaging
UniRef90	UHGV-0351425_23	UniRef90_UPI001D065029	271.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0351425_23	1280689.AUJC01000003_gene961	123.0	2.77e-34	Terminase small subunit	N/A
Pfam	UHGV-0351425_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0351425_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0351425_23	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_24	phrog_5902	246.1	0	N/A	unknown function
UniRef90	UHGV-0351425_24	UniRef90_A0A1B1I1J7	581.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0351425_24	1200557.JHWV01000001_gene277	583.0	0	Terminase RNaseH-like domain	N/A
COG	UHGV-0351425_24	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0351425_24	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_26	phrog_332	456.3	0	head-tail adaptor	connector
UniRef90	UHGV-0351425_26	UniRef90_UPI001D07F371	1082.0	0	portal protein	N/A
eggNOG-mapper	UHGV-0351425_26	1401067.HMPREF0872_06810	592.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-0351425_26	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-0351425_26	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_27	phrog_528	73.4	1.8e-21	N/A	unknown function
UniRef90	UHGV-0351425_27	UniRef90_A0A4S4AWB3	54.7	0.000000162	Endopeptidase	N/A
eggNOG-mapper	UHGV-0351425_27	1401067.HMPREF0872_06805	82.8	2.7e-19	N/A	N/A
PHROG	UHGV-0351425_28	phrog_458	89.3	5.8e-26	protease	other
eggNOG-mapper	UHGV-0351425_28	1401067.HMPREF0872_06800	118.0	1.66e-30	N/A	N/A
PHROG	UHGV-0351425_29	phrog_212	166.2	0	major head protein	head and packaging
UniRef90	UHGV-0351425_29	UniRef90_A0A239Z8I8	604.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-0351425_29	1401067.HMPREF0872_06795	368.0	0	N/A	N/A
Pfam	UHGV-0351425_29	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-0351425_29	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_30	phrog_427	41.6	0.000000000021	N/A	unknown function
structural_annotation	UHGV-0351425_30	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_32	phrog_394	168.7	0	tail protein	tail
eggNOG-mapper	UHGV-0351425_32	1401067.HMPREF0872_06780	215.0	0	N/A	N/A
structural_annotation	UHGV-0351425_32	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_33	phrog_376	539.7	0	tail protein	tail
UniRef90	UHGV-0351425_33	UniRef90_A0A3A4JUE0	290.0	0	E1_FCCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0351425_33	1401067.HMPREF0872_06775	543.0	0	N/A	N/A
PHROG	UHGV-0351425_34	phrog_308	76.8	2.9e-22	internal virion protein	head and packaging
UniRef90	UHGV-0351425_34	UniRef90_UPI001D08FF44	330.0	0	N/A	N/A
Pfam	UHGV-0351425_34	PF11090	N/A	N/A	Bacteriophage T7, probable scaffold protein Gp13	Phage_T7_Gp13
structural_annotation	UHGV-0351425_34	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_35	phrog_418	62.8	5.3e-18	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0351425_35	1401067.HMPREF0872_06765	169.0	0	N/A	N/A
structural_annotation	UHGV-0351425_35	PF05384,TIGR01010,COG3524	N/A	N/A	N/A	N/A
KOfam	UHGV-0351425_36	K21471	74.0	2.9e-21	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-0351425_36	UniRef90_A0A096AJQ8	330.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0351425_36	1401067.HMPREF0872_06760	330.0	0	N/A	N/A
Pfam	UHGV-0351425_36	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
structural_annotation	UHGV-0351425_36	NF008096	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_37	phrog_9880	216.0	0	N/A	unknown function
UniRef90	UHGV-0351425_37	UniRef90_D1YMD8	2504.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0351425_37	699218.HMPREF0889_0277	460.0	0	N/A	N/A
Pfam	UHGV-0351425_37	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
KOfam	UHGV-0351425_38	K13925	41.7	0.000000000011	pfbA; plasmin and fibronectin-binding protein A	N/A
UniRef90	UHGV-0351425_38	UniRef90_A0A2S7ZGN5	1265.0	0	Pectate_lyase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0351425_38	1443111.JASG01000004_gene3704	61.2	0.00000122	Pectate lyase superfamily protein	N/A
COG	UHGV-0351425_38	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-0351425_38	PF05096,PF03906,MF_03008,TIGR03866,COG3204	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_40	phrog_23091	217.3	0	N/A	unknown function
structural_annotation	UHGV-0351425_40	PF05105,NF035928	N/A	N/A	N/A	N/A
PHROG	UHGV-0351425_42	phrog_34863	57.0	1.7e-16	N/A	unknown function
UniRef90	UHGV-0351425_42	UniRef90_UPI001D017339	155.0	1.06499e-43	chitosanase	N/A
eggNOG-mapper	UHGV-0351425_42	546273.VEIDISOL_01083	235.0	0	LysM domain	N/A
Pfam	UHGV-0351425_42	PF21277	N/A	N/A	Type VI secretion system spike protein VgrG3-like, C-terminal	T6SS_VgrG3-like_C
COG	UHGV-0351425_42	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0351425_42	PF21277	N/A	N/A	N/A	N/A