UHGV-0357271 (vOTU-094383)

Viral Genome: UHGV-0357271

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0357271
vOTU ID	vOTU-094383
Representative Genome?	Yes
Source	mMGE
Original genome ID	DRR214959_141_594602_round1256~23821
Associated BioSample	SAMD00202455
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.96 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	25
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9798
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	54.48
Jumbo phage	No

Genome content
Genome length (bp)	22,208
GC content	39.28%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	94%
Average CDS length (bps)	697.40
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0357271_1	phrog_2003	176.2	0	N/A	unknown function
UniRef90	UHGV-0357271_1	UniRef90_UPI000AB188AB	139.0	1.96e-40	N/A	N/A
structural_annotation	UHGV-0357271_3	PF10400	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_4	phrog_36	65.3	1.1e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0357271_4	UniRef90_A0A4V0EC61	265.0	0	RNA polymerase ECF family sigma factor	N/A
eggNOG-mapper	UHGV-0357271_4	936580.HMPREF1516_0728	134.0	1.56e-38	sigma factor activity	N/A
Pfam	UHGV-0357271_4	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0357271_4	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0357271_4	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0357271_5	K07474	54.4	0.0000000000000043	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0357271_5	phrog_51	68.4	1.4e-19	terminase small subunit	head and packaging
UniRef90	UHGV-0357271_5	UniRef90_A0A4V0EDL5	160.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0357271_5	997830.HMPREF1124_0592	148.0	9.80909e-45	Terminase Small Subunit	N/A
Pfam	UHGV-0357271_5	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0357271_5	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0357271_5	PF03592	N/A	N/A	N/A	N/A
KOfam	UHGV-0357271_6	K06909	405.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0357271_6	phrog_3717	220.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0357271_6	UniRef90_A0A4D6ANH9	827.0	0	Terminase, large subunit	N/A
eggNOG-mapper	UHGV-0357271_6	565664.EFXG_01158	634.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0357271_6	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0357271_6	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0357271_6	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0357271_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-0357271_6	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0357271_6	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_7	phrog_64	432.5	0	portal protein	head and packaging
UniRef90	UHGV-0357271_7	UniRef90_A0A0P0N972	816.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0357271_7	997830.HMPREF1124_0594	665.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0357271_7	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0357271_7	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0357271_7	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_8	phrog_2841	419.3	0	minor head protein	head and packaging
UniRef90	UHGV-0357271_8	UniRef90_A0A1E9H4A9	593.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0357271_8	936580.HMPREF1516_0723	463.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0357271_8	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0357271_8	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
NCBIFam	UHGV-0357271_8	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0357271_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0357271_8	PF03496,PF04233,MF_04142,TIGR01641,NF041404,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_10	phrog_419	106.4	3.2e-31	N/A	unknown function
UniRef90	UHGV-0357271_10	UniRef90_A6MAI4	140.0	1.15999e-41	Gp119	N/A
eggNOG-mapper	UHGV-0357271_10	365659.smi_0447	185.0	0	N/A	N/A
structural_annotation	UHGV-0357271_10	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_11	phrog_172	171.0	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0357271_11	UniRef90_A0A0P0NA32	257.0	0	Phage capsid and scaffold protein	N/A
eggNOG-mapper	UHGV-0357271_11	1000588.HMPREF9965_1701	175.0	0	N/A	N/A
Pfam	UHGV-0357271_11	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0357271_11	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_12	phrog_422	252.6	0	major head protein	head and packaging
UniRef90	UHGV-0357271_12	UniRef90_A0A0N7JDY0	592.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0357271_12	997830.HMPREF1124_0598	546.0	0	N/A	N/A
Pfam	UHGV-0357271_12	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0357271_12	PF19821,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_13	phrog_933	53.0	0.000000000000005	N/A	unknown function
PHROG	UHGV-0357271_14	phrog_132	64.1	2e-18	head-tail adaptor	connector
UniRef90	UHGV-0357271_14	UniRef90_A0A1E9H444	174.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0357271_14	936580.HMPREF1516_0716	143.0	3.58732e-43	N/A	N/A
Pfam	UHGV-0357271_14	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0357271_14	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_15	phrog_2168	127.3	5.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-0357271_15	1054460.SPPN_00190	116.0	1.9e-32	N/A	N/A
PHROG	UHGV-0357271_16	phrog_5	86.5	4e-25	tail completion or Neck1 protein	connector
UniRef90	UHGV-0357271_16	UniRef90_A0A0P0N9E8	254.0	0	N/A	N/A
eggNOG-mapper	UHGV-0357271_16	1461246.X2KPH9_9VIRU	201.0	0	N/A	N/A
Pfam	UHGV-0357271_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0357271_16	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0357271_16	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_17	phrog_78	73.5	3.1e-21	tail terminator	connector
eggNOG-mapper	UHGV-0357271_17	936580.HMPREF1516_0713	207.0	0	N/A	N/A
structural_annotation	UHGV-0357271_17	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_18	phrog_158	87.8	1.7e-25	major tail protein	tail
UniRef90	UHGV-0357271_18	UniRef90_A0A0T8ZZN8	228.0	0	Lj965 prophage major tail protein	N/A
eggNOG-mapper	UHGV-0357271_18	997830.HMPREF1124_0603	224.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0357271_18	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0357271_18	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_19	phrog_183	64.7	1.6e-18	tail chaperone protein	tail
UniRef90	UHGV-0357271_19	UniRef90_A0A0P0NA82	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-0357271_19	1123304.AQYA01000037_gene231	155.0	0	N/A	N/A
Pfam	UHGV-0357271_19	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0357271_19	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_20	phrog_2066	105.0	4.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0357271_20	1123304.AQYA01000037_gene232	98.6	4.98e-25	N/A	N/A
PHROG	UHGV-0357271_21	phrog_1535	781.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0357271_21	UniRef90_A0A4U9Z5T2	1030.0	0	TMP repeat-containing protein	N/A
eggNOG-mapper	UHGV-0357271_21	936580.HMPREF1516_0709	920.0	0	phage tail tape measure protein	N/A
COG	UHGV-0357271_21	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0357271_21	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_22	phrog_1194	143.6	5.395e-43	N/A	unknown function
UniRef90	UHGV-0357271_22	UniRef90_A0A0P0N9J5	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-0357271_22	997830.HMPREF1124_0608	202.0	0	N/A	N/A
Pfam	UHGV-0357271_22	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0357271_22	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_23	phrog_9680	609.0	0	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0357271_23	UniRef90_UPI000B0B4F4B	819.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0357271_23	1289601.M1PSK1_9CAUD	569.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0357271_23	PF07902	N/A	N/A	gp58-like protein	Gp58
structural_annotation	UHGV-0357271_23	PF14594,PF03944,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0357271_24	phrog_1137	76.4	2e-22	N/A	unknown function
UniRef90	UHGV-0357271_24	UniRef90_Q8DXK9	71.2	0.00000000000000951	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0357271_24	1214184.ALKY01000039_gene906	50.4	0.000000221	N/A	N/A
PHROG	UHGV-0357271_25	phrog_2566	78.0	9e-23	N/A	unknown function
UniRef90	UHGV-0357271_25	UniRef90_A0A0Z8KYC0	85.5	3.34e-20	N/A	N/A
eggNOG-mapper	UHGV-0357271_25	120574.Q94M32_9CAUD	48.9	0.00000176	N/A	N/A
PHROG	UHGV-0357271_26	phrog_199	55.5	6.7e-16	holin	lysis
UniRef90	UHGV-0357271_26	UniRef90_A0A1I7JG75	170.0	0	Holin, Cph1 family	N/A
eggNOG-mapper	UHGV-0357271_26	1051631.F8HGP0_9CAUD	164.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-0357271_26	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0357271_26	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
PHROG	UHGV-0357271_27	phrog_443	56.1	0.000000000000001	holin	lysis
UniRef90	UHGV-0357271_27	UniRef90_UPI00035E0F22	86.7	5.2e-21	holin	N/A
eggNOG-mapper	UHGV-0357271_27	1123304.AQYA01000037_gene239	87.0	5.99e-22	N/A	N/A
Pfam	UHGV-0357271_27	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0357271_27	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0357271_28	K01447	88.8	8.7e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0357271_28	phrog_833	123.8	1.9e-36	endolysin	lysis
UniRef90	UHGV-0357271_28	UniRef90_UPI001AE125CA	412.0	0	peptidoglycan recognition protein family protein	N/A
eggNOG-mapper	UHGV-0357271_28	1054460.SPPN_06265	247.0	0	Ami_2	N/A
Pfam	UHGV-0357271_28	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0357271_28	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
PHROG	UHGV-0357271_29	phrog_35095	119.8	9.2e-36	N/A	unknown function
PHROG	UHGV-0357271_30	phrog_1529	102.4	6.2e-30	N/A	unknown function
UniRef90	UHGV-0357271_30	UniRef90_UPI001D137BEC	96.3	1.47e-24	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0357271_30	638301.HMPREF0444_1489	70.9	0.00000000000000285	N/A	N/A