UHGV-0358950 (vOTU-018890)

Viral Genome: UHGV-0358950

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0358950
vOTU ID	vOTU-018890
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_240091_round1256~3946721
Associated BioSample	SAMEA2466903
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.22 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9787
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	13.3
Jumbo phage	No

Genome content
Genome length (bp)	37,631
GC content	57.64%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	90%
Average CDS length (bps)	679.86
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0358950_1	phrog_5811	62.8	3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0358950_1	1410630.JNKP01000007_gene580	85.1	8.51e-17	Glycine rich protein	N/A
Pfam	UHGV-0358950_1	PF12810	N/A	N/A	Glycine rich protein	Gly_rich
eggNOG-mapper	UHGV-0358950_3	755731.Clo1100_2421	102.0	1.36e-18	N/A	N/A
Pfam	UHGV-0358950_3	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
PHROG	UHGV-0358950_6	phrog_511	73.6	2e-21	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0358950_6	1449126.JQKL01000046_gene2081	66.2	0.0000000174	N/A	N/A
COG	UHGV-0358950_6	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0358950_6	PF11134,MF_03022,NF010237,TIGR04362,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0358950_7	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0358950_9	phrog_1357	226.3	0	major head protein	head and packaging
UniRef90	UHGV-0358950_9	UniRef90_A0A2S0L5P8	249.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0358950_9	696281.Desru_1092	245.0	0	N/A	N/A
Pfam	UHGV-0358950_9	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0358950_9	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0358950_9	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0358950_11	phrog_156	226.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0358950_11	1203606.HMPREF1526_02749	153.0	4.64e-37	N/A	N/A
structural_annotation	UHGV-0358950_11	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0358950_12	K06909	111.4	9.6e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0358950_12	phrog_979	160.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0358950_12	UniRef90_UPI0004130EC4	477.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0358950_12	1121091.AUMP01000003_gene2581	477.0	0	Terminase-like family	N/A
Pfam	UHGV-0358950_12	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0358950_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0358950_12	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-0358950_13	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0358950_13	PF02796,TIGR02844	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0358950_14	1378168.N510_03076	47.0	0.0000045	N/A	N/A
structural_annotation	UHGV-0358950_14	PF03869,NF010256	N/A	N/A	N/A	N/A
UniRef90	UHGV-0358950_15	UniRef90_A0A6I2R3T9	62.8	0.00000000000339	Protein phosphatase	N/A
PHROG	UHGV-0358950_19	phrog_15863	158.7	0	N/A	unknown function
UniRef90	UHGV-0358950_19	UniRef90_A0A498RA91	139.0	6.5e-39	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0358950_19	397291.C804_01061	133.0	2.16e-37	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0358950_19	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-0358950_20	phrog_35407	41.8	0.000000000013	N/A	unknown function
structural_annotation	UHGV-0358950_23	PF07374,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-0358950_24	UniRef90_A0A832L5E4	80.5	7.74e-16	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-0358950_24	1304885.AUEY01000070_gene1852	97.8	3e-23	N/A	N/A
structural_annotation	UHGV-0358950_24	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0358950_26	TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0358950_28	phrog_924	42.8	0.0000000000014	N/A	unknown function
UniRef90	UHGV-0358950_28	UniRef90_A0A417H740	144.0	1.23999e-40	N/A	N/A
Pfam	UHGV-0358950_28	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0358950_28	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0358950_29	phrog_757	185.1	0	DNA methyltransferase	other
UniRef90	UHGV-0358950_29	UniRef90_A0A355KVL2	348.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0358950_29	748224.HMPREF9436_03069	388.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0358950_29	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0358950_29	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-0358950_30	UniRef90_UPI00054386A4	67.0	0.00000000000768	nucleotide pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-0358950_30	272562.CA_C1930	65.5	0.00000000000535	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-0358950_30	PF12643	N/A	N/A	MazG-like family	MazG-like
COG	UHGV-0358950_30	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0358950_30	COG1694	N/A	N/A	N/A	N/A
KOfam	UHGV-0358950_32	K07741	100.3	4.7e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0358950_32	phrog_130	243.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0358950_32	UniRef90_A0A417H802	242.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0358950_32	1437608.BBIA_0645	214.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0358950_32	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0358950_32	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0358950_32	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0358950_32	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0358950_33	phrog_9804	145.6	2.60642e-43	N/A	unknown function
UniRef90	UHGV-0358950_33	UniRef90_UPI0015C5D332	158.0	2.8026e-45	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0358950_33	1121344.JHZO01000003_gene981	139.0	1.73e-38	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0358950_33	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0358950_33	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0358950_34	phrog_16304	49.6	0.000000000000041	N/A	unknown function
eggNOG-mapper	UHGV-0358950_34	33035.JPJF01000122_gene2459	55.5	0.00000243	N/A	N/A
Pfam	UHGV-0358950_34	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0358950_34	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0358950_35	K03111	121.0	1.6e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0358950_35	phrog_44	116.4	2.6e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0358950_35	UniRef90_A0A1Q6Q4S4	112.0	4.69e-29	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0358950_35	1007096.BAGW01000007_gene1922	87.0	4.39e-20	Single-strand binding protein family	N/A
Pfam	UHGV-0358950_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0358950_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0358950_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0358950_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0358950_35	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0358950_36	phrog_7838	141.7	5.29971e-42	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0358950_36	UniRef90_A0A8D9UGW3	177.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0358950_36	742767.HMPREF9456_02052	152.0	1.30321e-43	N/A	N/A
structural_annotation	UHGV-0358950_36	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0358950_38	phrog_253	120.6	1.1e-35	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0358950_38	UniRef90_UPI000C7CF4DA	96.3	2.75e-22	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0358950_38	1121091.AUMP01000003_gene2548	72.4	0.0000000000000932	Siphovirus Gp157	N/A
Pfam	UHGV-0358950_38	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0358950_38	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0358950_40	PF20800	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0358950_43	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0358950_44	760568.Desku_0919	120.0	2.15e-31	N/A	N/A
structural_annotation	UHGV-0358950_44	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0358950_47	K22300	56.5	7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0358950_47	UniRef90_UPI000B3564AD	87.4	7.64e-20	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0358950_47	97138.C820_01960	82.8	8.73e-19	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0358950_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0358950_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0358950_47	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0358950_50	K14059	189.8	0	int; integrase	N/A
PHROG	UHGV-0358950_50	phrog_1	175.7	0	integrase	integration and excision
UniRef90	UHGV-0358950_50	UniRef90_A0A353J242	190.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0358950_50	246199.CUS_5913	145.0	1.39e-37	Phage integrase family	N/A
Pfam	UHGV-0358950_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0358950_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0358950_50	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A