UHGV-0361006 (vOTU-100774)

Viral Genome: UHGV-0361006

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0361006
vOTU ID	vOTU-100774
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_38269_round13~9101600
Associated BioSample	SAMD00115001
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.81 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9775
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.47
Jumbo phage	No

Genome content
Genome length (bp)	21,805
GC content	28.95%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	95%
Average CDS length (bps)	742.07
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.81)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0361006_4	1294142.CINTURNW_1051	97.8	8.17e-23	N/A	N/A
KOfam	UHGV-0361006_5	K01448	103.7	2.1e-30	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0361006_5	phrog_435	180.2	0	endolysin	lysis
UniRef90	UHGV-0361006_5	UniRef90_UPI0006C11D0D	518.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0361006_5	1414720.CBYM010000001_gene715	518.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0361006_5	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0361006_5	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0361006_5	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0361006_5	PF01520,PF01471,MF_00562,TIGR02883,NF038080,COG0860,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-0361006_6	UniRef90_UPI0018A9B2DB	146.0	1.82169e-44	holin	N/A
eggNOG-mapper	UHGV-0361006_6	1041504.RATSFB_0394	47.4	0.0000054	COG5546 Small integral membrane protein	N/A
COG	UHGV-0361006_6	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_7	phrog_1863	75.4	3.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0361006_7	1414720.CBYM010000001_gene713	176.0	0	N/A	N/A
PHROG	UHGV-0361006_8	phrog_6782	127.6	1e-37	tail fiber protein	tail
UniRef90	UHGV-0361006_8	UniRef90_L1Q8H4	308.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0361006_8	545697.HMPREF0216_02867	308.0	0	domain, Protein	N/A
NCBIFam	UHGV-0361006_8	NF040910.1	N/A	N/A	CD1375 family protein	N/A
COG	UHGV-0361006_8	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-0361006_8	PF10651,PF01105	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_9	phrog_6616	155.7	0	tail protein	tail
eggNOG-mapper	UHGV-0361006_9	1414720.CBYM010000002_gene560	166.0	1.76e-40	Phage minor structural protein	N/A
COG	UHGV-0361006_9	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0361006_10	phrog_1194	130.3	7e-39	N/A	unknown function
eggNOG-mapper	UHGV-0361006_10	1414720.CBYM010000002_gene561	189.0	0	N/A	N/A
Pfam	UHGV-0361006_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0361006_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_11	phrog_31409	334.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0361006_11	UniRef90_A0A1C6GVH2	543.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0361006_11	1414720.CBYM010000002_gene562	1079.0	0	phage tail tape measure protein	N/A
COG	UHGV-0361006_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0361006_11	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_12	phrog_19318	53.3	0.0000000000000048	N/A	unknown function
UniRef90	UHGV-0361006_12	UniRef90_A0A533S6H6	71.6	0.0000000000000358	Phage tail assembly chaperone	N/A
eggNOG-mapper	UHGV-0361006_12	1414720.CBYM010000001_gene706	63.9	0.00000000000456	N/A	N/A
PHROG	UHGV-0361006_13	phrog_2115	54.4	0.0000000000000025	tail protein	tail
eggNOG-mapper	UHGV-0361006_13	1414720.CBYM010000002_gene564	197.0	0	N/A	N/A
structural_annotation	UHGV-0361006_13	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_14	phrog_158	66.7	4.7e-19	major tail protein	tail
UniRef90	UHGV-0361006_14	UniRef90_A0A1C6JNH2	259.0	0	Predicted secreted protein	N/A
eggNOG-mapper	UHGV-0361006_14	1414720.CBYM010000002_gene566	259.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0361006_14	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-0361006_14	PF16461,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_15	phrog_347	41.0	0.000000000023	tail terminator	connector
UniRef90	UHGV-0361006_15	UniRef90_UPI000BB98E7D	132.0	3.05e-37	N/A	N/A
eggNOG-mapper	UHGV-0361006_15	1414720.CBYM010000002_gene567	234.0	0	N/A	N/A
structural_annotation	UHGV-0361006_15	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_16	phrog_5	58.5	1.3e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0361006_16	UniRef90_A0A1C6JN94	281.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0361006_16	1414720.CBYM010000002_gene568	281.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0361006_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0361006_16	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0361006_16	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_17	phrog_25	86.7	2.1e-25	head closure Hc1	connector
UniRef90	UHGV-0361006_17	UniRef90_A0A1C6JMX8	208.0	0	Bacteriophage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0361006_17	1414720.CBYM010000002_gene569	208.0	0	Phage head-tail joining protein	N/A
Pfam	UHGV-0361006_17	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0361006_17	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0361006_17	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0361006_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_18	phrog_40	49.1	0.000000000000076	head-tail adaptor Ad1	connector
UniRef90	UHGV-0361006_18	UniRef90_UPI001055080F	140.0	1.82996e-41	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0361006_18	1414720.CBYM010000002_gene570	173.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0361006_18	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0361006_18	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0361006_18	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_19	phrog_6865	49.1	0.000000000000063	N/A	unknown function
PHROG	UHGV-0361006_20	phrog_10	213.7	0	major head protein	head and packaging
UniRef90	UHGV-0361006_20	UniRef90_UPI0018A9C330	681.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0361006_20	1414720.CBYM010000002_gene572	661.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0361006_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0361006_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0361006_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0361006_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0361006_21	K06904	105.0	9.9e-31	N/A	N/A
PHROG	UHGV-0361006_21	phrog_80	134.1	1.5e-39	head maturation protease	head and packaging
UniRef90	UHGV-0361006_21	UniRef90_UPI00164AE523	351.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0361006_21	1414720.CBYM010000002_gene573	350.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0361006_21	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0361006_21	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0361006_21	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0361006_21	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_22	phrog_12	186.3	0	portal protein	head and packaging
UniRef90	UHGV-0361006_22	UniRef90_UPI0004B5AC91	740.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0361006_22	1414720.CBYM010000002_gene574	740.0	0	Portal protein	N/A
Pfam	UHGV-0361006_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0361006_22	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0361006_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0361006_22	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_23	phrog_9	259.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0361006_23	UniRef90_UPI00100A5047	903.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0361006_23	1414720.CBYM010000002_gene575	708.0	0	Terminase	N/A
Pfam	UHGV-0361006_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0361006_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0361006_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0361006_23	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_24	phrog_83	57.3	2.7e-16	terminase small subunit	head and packaging
UniRef90	UHGV-0361006_24	UniRef90_A0A6B4QQV5	208.0	0	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0361006_24	632245.CLP_2921	128.0	8.01e-36	phage terminase small subunit	N/A
Pfam	UHGV-0361006_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0361006_24	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0361006_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0361006_25	phrog_144	58.3	1.6e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0361006_25	UniRef90_UPI001D087DB8	129.0	1.27e-35	serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-0361006_25	632245.CLP_2922	176.0	0	N/A	N/A
PHROG	UHGV-0361006_26	phrog_309	98.1	7e-29	terminase small subunit	head and packaging
UniRef90	UHGV-0361006_26	UniRef90_UPI0012EE5C69	306.0	0	Xaa-His dipeptidase	N/A
eggNOG-mapper	UHGV-0361006_26	1414720.CBYM010000001_gene693	306.0	0	N/A	N/A
structural_annotation	UHGV-0361006_26	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0361006_27	K04763	83.8	2.6e-24	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0361006_27	phrog_216	131.7	4.1e-39	integrase	integration and excision
UniRef90	UHGV-0361006_27	UniRef90_A0A1C6DLA6	410.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0361006_27	1414720.CBYM010000001_gene692	419.0	0	Phage integrase family	N/A
Pfam	UHGV-0361006_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0361006_27	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0361006_27	PF00589,MF_01807,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0361006_28	1414720.CBYM010000040_gene1639	52.8	0.0000000102	N/A	N/A