UHGV-0361357 (vOTU-051074)

Viral Genome: UHGV-0361357

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0361357
vOTU ID	vOTU-051074
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR2142197_119_56812_round347~4157651
Associated BioSample	SAMN03955539
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.18
Jumbo phage	No

Genome content
Genome length (bp)	45,634
GC content	42.39%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	71
CDS density	90%
Average CDS length (bps)	576.80
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0361357_1	1410625.JHWK01000002_gene45	72.0	0.000000000000064	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0361357_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0361357_1	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0361357_1	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-0361357_2	UniRef90_A0A395X7A4	182.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0361357_2	476272.RUMHYD_01766	119.0	8.77e-34	N/A	N/A
PHROG	UHGV-0361357_3	phrog_3754	120.1	1.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-0361357_3	476272.RUMHYD_01764	176.0	0	N/A	N/A
PHROG	UHGV-0361357_4	phrog_581	281.4	0	minor head protein	head and packaging
UniRef90	UHGV-0361357_4	UniRef90_A0A412EKN3	803.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0361357_4	33035.JPJF01000106_gene3134	353.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0361357_4	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0361357_4	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0361357_4	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_5	phrog_533	265.6	0	portal protein	head and packaging
UniRef90	UHGV-0361357_5	UniRef90_A0A1C6CDM8	647.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0361357_5	33035.JPJF01000106_gene3135	482.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0361357_5	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0361357_6	K06909	381.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0361357_6	phrog_3717	147.5	6.30584e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0361357_6	UniRef90_A0A6L8SYJ6	963.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0361357_6	33035.JPJF01000106_gene3136	528.0	0	Terminase small subunit	N/A
Pfam	UHGV-0361357_6	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0361357_6	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0361357_6	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0361357_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0361357_6	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_7	phrog_10714	51.4	0.000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0361357_10	397290.C810_01492	67.8	0.00000000000196	N/A	N/A
PHROG	UHGV-0361357_13	phrog_8684	109.2	1.5e-32	N/A	unknown function
UniRef90	UHGV-0361357_13	UniRef90_A0A3A6GQT2	196.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0361357_13	411470.RUMGNA_02199	96.7	1.06e-23	N/A	N/A
Pfam	UHGV-0361357_13	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0361357_13	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0361357_13	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_14	phrog_20593	40.0	0.000000000045	N/A	unknown function
eggNOG-mapper	UHGV-0361357_15	476272.RUMHYD_01751	48.5	0.00000621	N/A	N/A
AcrCatalog	UHGV-0361357_15	cluster_11670	43.5	0.0000000213	NA	N/A
PHROG	UHGV-0361357_17	phrog_15198	49.2	0.00000000000009	N/A	unknown function
UniRef90	UHGV-0361357_17	UniRef90_A0A373NR41	72.0	0.0000000000000425	N/A	N/A
eggNOG-mapper	UHGV-0361357_17	742723.HMPREF9477_00919	52.8	0.000000671	N/A	N/A
Pfam	UHGV-0361357_17	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0361357_18	PF17888	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0361357_21	PF04936	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_22	phrog_3502	43.0	0.0000000000085	N/A	unknown function
UniRef90	UHGV-0361357_22	UniRef90_A0A412EKY9	94.0	2.55e-23	Winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0361357_22	525256.HMPREF0091_10731	50.1	0.00000524	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0361357_22	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-0361357_22	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0361357_22	PF01726,MF_00732,TIGR00738,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_24	phrog_1313	381.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0361357_24	UniRef90_UPI001655DAE1	707.0	0	bifunctional DNA primase/polymerase	N/A
eggNOG-mapper	UHGV-0361357_24	1235793.C809_02292	306.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0361357_24	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-0361357_24	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
Pfam	UHGV-0361357_24	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0361357_24	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0361357_24	PF05272,PF09250,PF08708,MF_00016,NF011296,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_26	phrog_3490	112.1	4.5e-33	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0361357_26	UniRef90_A0A173R9N6	286.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0361357_26	476272.RUMHYD_02832	286.0	0	ERCC4 domain	N/A
Pfam	UHGV-0361357_26	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-0361357_26	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-0361357_26	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_27	phrog_18107	125.6	3.8e-37	N/A	unknown function
eggNOG-mapper	UHGV-0361357_27	476272.RUMHYD_02831	194.0	0	N/A	N/A
structural_annotation	UHGV-0361357_27	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_28	phrog_21138	113.5	4.3e-40	N/A	unknown function
UniRef90	UHGV-0361357_28	UniRef90_A0A8E5T563	104.0	1.23e-24	Deacetylase sirtuin-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0361357_28	755731.Clo1100_3605	107.0	3.74e-26	N/A	N/A
structural_annotation	UHGV-0361357_28	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_29	phrog_2872	164.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0361357_29	UniRef90_A0A8F2J9K2	296.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0361357_29	1304866.K413DRAFT_0827	223.0	0	AAA domain	N/A
Pfam	UHGV-0361357_29	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0361357_29	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-0361357_30	UniRef90_R6RDX0	78.2	1.06e-17	Arginyl-tRNA synthetase	N/A
structural_annotation	UHGV-0361357_31	NF011879	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0361357_35	cluster_17974	59.7	0.00000000000000139	NA	N/A
PHROG	UHGV-0361357_37	phrog_6058	53.7	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0361357_37	742733.HMPREF9469_05094	61.6	0.000000000124	N/A	N/A
PHROG	UHGV-0361357_38	phrog_463	218.0	0	anti-repressor	transcription regulation
UniRef90	UHGV-0361357_38	UniRef90_A0A3A6GZT3	414.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-0361357_38	411490.ANACAC_00813	243.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0361357_38	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0361357_38	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0361357_38	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0361357_38	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0361357_39	PF21441,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-0361357_41	UniRef90_A0A396QAC5	103.0	1.76e-27	N/A	N/A
eggNOG-mapper	UHGV-0361357_41	411470.RUMGNA_03231	102.0	1.08e-27	N/A	N/A
Pfam	UHGV-0361357_41	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0361357_41	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0361357_41	PF05339,MF_00535,NF002773,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_42	phrog_2967	47.9	0.00000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-0361357_42	UniRef90_UPI001D029144	162.0	0	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0361357_42	457412.RSAG_00795	120.0	3e-33	sequence-specific DNA binding	N/A
COG	UHGV-0361357_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0361357_42	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0361357_45	K07705	136.2	2.4e-40	lytT, lytR; two-component system, LytTR family, response regulator LytT	N/A
PHROG	UHGV-0361357_45	phrog_8810	131.4	6.9e-39	N/A	unknown function
UniRef90	UHGV-0361357_45	UniRef90_UPI001D0E4226	469.0	0	LytTR family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0361357_45	556261.HMPREF0240_03082	142.0	6.58e-39	response regulator	N/A
Pfam	UHGV-0361357_45	PF00072	N/A	N/A	Response regulator receiver domain	Response_reg
Pfam	UHGV-0361357_45	PF04397	N/A	N/A	LytTr DNA-binding domain	LytTR
COG	UHGV-0361357_45	COG3279	N/A	N/A	DNA-binding response regulator, LytR/AlgR family	N/A
structural_annotation	UHGV-0361357_45	PF04397,PF00072,MF_00981,NF010684,COG3279	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_46	phrog_8545	63.0	4.5e-18	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0361357_46	UniRef90_UPI001C0EAFDF	258.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-0361357_46	1304866.K413DRAFT_0836	193.0	0	tRNA_anti-like	N/A
Pfam	UHGV-0361357_46	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0361357_46	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
KOfam	UHGV-0361357_47	K14059	107.3	2.3e-31	int; integrase	N/A
PHROG	UHGV-0361357_47	phrog_1	133.8	1.6e-39	integrase	integration and excision
UniRef90	UHGV-0361357_47	UniRef90_D4LPN8	714.0	0	Phage integrase family	N/A
eggNOG-mapper	UHGV-0361357_47	1235792.C808_05256	361.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0361357_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0361357_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0361357_47	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0361357_48	K07273	201.9	0	acm; lysozyme	N/A
PHROG	UHGV-0361357_48	phrog_291	151.5	5.60519e-45	endolysin	lysis
UniRef90	UHGV-0361357_48	UniRef90_A0A317UBE2	868.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0361357_48	476272.RUMHYD_02876	244.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-0361357_48	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0361357_48	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0361357_48	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0361357_48	PF01183,TIGR02594,TIGR04303,COG3757,COG3942	N/A	N/A	N/A	N/A
UniRef90	UHGV-0361357_50	UniRef90_UPI001C0EBDDC	102.0	1.12e-24	pyocin knob domain-containing protein	N/A
PHROG	UHGV-0361357_51	phrog_6616	490.3	0	tail protein	tail
UniRef90	UHGV-0361357_51	UniRef90_UPI001D0E203F	2284.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0361357_51	33035.JPJF01000043_gene1002	266.0	0	N/A	N/A
Pfam	UHGV-0361357_51	PF21470	N/A	N/A	Minor structural protein 5-like, C-terminal domain	BppU-like_C
Pfam	UHGV-0361357_51	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0361357_51	PF05113,PF01835,PF03921,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0361357_52	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_53	phrog_1535	485.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0361357_53	UniRef90_A0A173R880	530.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0361357_53	476272.RUMHYD_01785	529.0	0	phage tail tape measure protein	N/A
COG	UHGV-0361357_53	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0361357_53	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_54	phrog_706	129.1	3.1e-38	N/A	unknown function
UniRef90	UHGV-0361357_54	UniRef90_UPI001BAD00AD	210.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0361357_54	411459.RUMOBE_01383	348.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0361357_54	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0361357_54	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_55	phrog_11299	70.9	1.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0361357_55	33035.JPJF01000106_gene3125	58.2	0.00000000872	N/A	N/A
structural_annotation	UHGV-0361357_55	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_56	phrog_3099	130.9	7.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-0361357_56	411902.CLOBOL_00129	169.0	0	N/A	N/A
structural_annotation	UHGV-0361357_56	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_57	phrog_3266	93.8	1.4e-27	tail completion	connector
eggNOG-mapper	UHGV-0361357_57	476272.RUMHYD_01781	150.0	3.08286e-44	N/A	N/A
structural_annotation	UHGV-0361357_57	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_58	phrog_556	53.0	5.1e-16	minor head protein	head and packaging
UniRef90	UHGV-0361357_58	UniRef90_UPI000E4989EB	272.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0361357_58	476272.RUMHYD_01780	148.0	1.65353e-43	N/A	N/A
structural_annotation	UHGV-0361357_58	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_59	phrog_3366	98.1	7.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0361357_59	476272.RUMHYD_01779	163.0	0	N/A	N/A
structural_annotation	UHGV-0361357_59	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_60	phrog_18218	131.8	2.1e-39	N/A	unknown function
UniRef90	UHGV-0361357_60	UniRef90_A0A8D9PGR5	141.0	1.45006e-41	Holin	N/A
eggNOG-mapper	UHGV-0361357_60	411902.CLOBOL_03424	85.1	5.9e-20	N/A	N/A
structural_annotation	UHGV-0361357_60	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_61	phrog_774	67.2	3.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0361357_61	397290.C810_05225	142.0	3.62936e-43	N/A	N/A
PHROG	UHGV-0361357_63	phrog_541	92.2	3.2e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0361357_63	476272.RUMHYD_01778	112.0	2.5e-29	N/A	N/A
PHROG	UHGV-0361357_64	phrog_544	166.5	0	major head protein	head and packaging
UniRef90	UHGV-0361357_64	UniRef90_A0A395X7A1	733.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0361357_64	1232453.BAIF02000011_gene3359	385.0	0	N/A	N/A
Pfam	UHGV-0361357_64	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0361357_64	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0361357_65	phrog_194	57.3	3.4e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-0361357_65	UniRef90_UPI001D14C9C8	181.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0361357_65	476272.RUMHYD_01775	182.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0361357_65	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0361357_66	phrog_28802	222.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0361357_66	476272.RUMHYD_01772	194.0	0	N/A	N/A
PHROG	UHGV-0361357_67	phrog_20016	72.9	3.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0361357_67	1226322.HMPREF1545_00077	72.8	8.93e-16	N/A	N/A
PHROG	UHGV-0361357_68	phrog_16490	191.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0361357_68	397290.C810_01328	191.0	0	N/A	N/A
PHROG	UHGV-0361357_69	phrog_22984	98.5	3.6e-29	N/A	unknown function
PHROG	UHGV-0361357_70	phrog_21718	132.7	1.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-0361357_70	476272.RUMHYD_01768	129.0	4.55e-36	N/A	N/A
eggNOG-mapper	UHGV-0361357_71	411470.RUMGNA_03785	69.7	0.000000000000393	N/A	N/A
AcrCatalog	UHGV-0361357_71	cluster_81672	273.0	0	NA	N/A