UHGV-0367362 (vOTU-012064)

Viral Genome: UHGV-0367362

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0367362
vOTU ID	vOTU-012064
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR5813352_141_90289_round347~1239313
Associated BioSample	SAMN13013070
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9746
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	60.35
Jumbo phage	No

Genome content
Genome length (bp)	36,109
GC content	44.86%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	92%
Average CDS length (bps)	654.77
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0367362_1	K06400	361.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0367362_1	phrog_95	357.1	0	integrase	integration and excision
UniRef90	UHGV-0367362_1	UniRef90_A0A3D4JJV8	425.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0367362_1	537013.CLOSTMETH_01697	419.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0367362_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0367362_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0367362_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0367362_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0367362_1	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_2	phrog_10292	54.3	5.1e-16	N/A	unknown function
UniRef90	UHGV-0367362_2	UniRef90_R6T9F1	270.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0367362_2	537013.CLOSTMETH_02269	85.5	1.56e-19	TM2 domain	N/A
Pfam	UHGV-0367362_2	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0367362_2	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0367362_3	K01356	123.0	4.1e-36	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0367362_3	phrog_4	136.2	2.8e-40	transcriptional repressor	transcription regulation
UniRef90	UHGV-0367362_3	UniRef90_R6T2B0	434.0	0	Peptidase S24-like protein	N/A
eggNOG-mapper	UHGV-0367362_3	246199.CUS_5911	233.0	0	N/A	N/A
Pfam	UHGV-0367362_3	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-0367362_3	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0367362_3	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0367362_3	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0367362_4	UniRef90_R6TEQ2	142.0	2.67648e-43	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0367362_4	246199.CUS_5910	120.0	4.55e-35	N/A	N/A
structural_annotation	UHGV-0367362_4	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0367362_6	PF01775,MF_00273,NF010188	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_11	phrog_38338	101.6	7.1e-30	N/A	unknown function
UniRef90	UHGV-0367362_11	UniRef90_UPI00137B3A8C	85.1	2.91e-18	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0367362_11	641112.ACOK01000073_gene2869	87.4	1.35e-20	N/A	N/A
PHROG	UHGV-0367362_12	phrog_8470	90.8	1.5e-26	N/A	unknown function
UniRef90	UHGV-0367362_12	UniRef90_UPI0019175B9C	208.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0367362_12	641112.ACOK01000073_gene2870	318.0	0	PcfJ-like protein	N/A
PHROG	UHGV-0367362_13	phrog_8470	99.1	5.2e-29	N/A	unknown function
UniRef90	UHGV-0367362_13	UniRef90_U2UQS9	62.4	0.000000000214	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-0367362_13	1514668.JOOA01000001_gene226	103.0	1.82e-24	PcfJ-like protein	N/A
Pfam	UHGV-0367362_13	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
PHROG	UHGV-0367362_14	phrog_15609	84.0	7.9e-25	N/A	unknown function
UniRef90	UHGV-0367362_14	UniRef90_A0A373SLQ6	451.0	0	N/A	N/A
eggNOG-mapper	UHGV-0367362_14	641112.ACOK01000073_gene2872	108.0	3.48e-25	N/A	N/A
structural_annotation	UHGV-0367362_14	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_15	phrog_253	112.8	2.6e-33	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0367362_15	UniRef90_UPI0019171ADA	118.0	2.72e-30	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0367362_15	881621.LIV_2167	75.1	0.0000000000000118	Siphovirus Gp157	N/A
Pfam	UHGV-0367362_15	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0367362_15	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_16	phrog_2872	247.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0367362_16	UniRef90_A0A373VPJ3	395.0	0	ATP-binding protein (Fragment)	N/A
eggNOG-mapper	UHGV-0367362_16	754027.HMPREF9554_00709	220.0	0	N/A	N/A
Pfam	UHGV-0367362_16	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0367362_16	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0367362_17	K19789	327.2	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0367362_17	phrog_16	282.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0367362_17	UniRef90_A0A356CZA9	900.0	0	Helicase	N/A
eggNOG-mapper	UHGV-0367362_17	1410670.JHXF01000015_gene2270	594.0	0	helicase	N/A
PADLOC	UHGV-0367362_17	mREase_IV_00005	107.5	2.5e-32	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0367362_17	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0367362_17	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0367362_17	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0367362_17	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_18	phrog_5702	80.4	1.1e-23	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0367362_18	UniRef90_A0A373SNE0	209.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0367362_18	1410670.JHXF01000015_gene2271	144.0	1.079e-43	VRR_NUC	N/A
Pfam	UHGV-0367362_18	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0367362_18	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_19	phrog_378	93.5	3e-27	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0367362_19	UniRef90_A0A373SL44	372.0	0	N/A	N/A
eggNOG-mapper	UHGV-0367362_19	1423807.BACO01000050_gene1454	73.6	0.0000000000000949	N/A	N/A
Pfam	UHGV-0367362_19	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0367362_19	PF05037,NF004948	N/A	N/A	N/A	N/A
KOfam	UHGV-0367362_20	K06919	110.1	2e-32	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0367362_20	phrog_1829	853.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0367362_20	UniRef90_A0A356CZ91	1523.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0367362_20	1410670.JHXF01000015_gene2274	845.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0367362_20	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0367362_20	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0367362_20	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0367362_20	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0367362_20	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0367362_20	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_22	phrog_36	61.1	2.2e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0367362_22	UniRef90_A0A371AT86	58.2	0.0000000778	N/A	N/A
KOfam	UHGV-0367362_25	K06909	419.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0367362_25	phrog_18557	160.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0367362_25	UniRef90_A0A1C6IMR2	1099.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0367362_25	411461.DORFOR_01162	665.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0367362_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0367362_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0367362_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0367362_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0367362_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_26	phrog_533	348.1	0	portal protein	head and packaging
UniRef90	UHGV-0367362_26	UniRef90_R6TDI6	886.0	0	Phage portal protein SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0367362_26	1304866.K413DRAFT_3035	437.0	0	N/A	N/A
structural_annotation	UHGV-0367362_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_27	phrog_581	336.0	0	minor head protein	head and packaging
UniRef90	UHGV-0367362_27	UniRef90_R6SXL7	992.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0367362_27	658655.HMPREF0988_02563	409.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0367362_27	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0367362_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0367362_27	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0367362_28	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_29	phrog_194	101.9	7.4e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-0367362_29	UniRef90_R6U550	377.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0367362_29	742765.HMPREF9457_02126	154.0	8.40779e-45	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0367362_29	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0367362_29	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_30	phrog_544	346.1	0	major head protein	head and packaging
UniRef90	UHGV-0367362_30	UniRef90_R6T873	669.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-0367362_30	936580.HMPREF1516_0718	314.0	0	N/A	N/A
NCBIFam	UHGV-0367362_30	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0367362_30	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_31	phrog_541	91.2	8.8e-27	head-tail adaptor	connector
UniRef90	UHGV-0367362_31	UniRef90_A0A371AQT0	104.0	1.75e-26	N/A	N/A
eggNOG-mapper	UHGV-0367362_31	1304866.K413DRAFT_3039	95.1	1.41e-23	N/A	N/A
PHROG	UHGV-0367362_32	phrog_3366	74.5	1.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0367362_32	1449050.JNLE01000003_gene3887	82.4	1.09e-18	N/A	N/A
Pfam	UHGV-0367362_32	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0367362_32	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_33	phrog_556	123.9	5.7e-37	minor head protein	head and packaging
UniRef90	UHGV-0367362_33	UniRef90_UPI00143BEF55	126.0	1.2e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-0367362_33	1449050.JNLE01000003_gene3886	108.0	3.18e-28	N/A	N/A
Pfam	UHGV-0367362_33	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0367362_33	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_34	phrog_3266	122.6	1.9e-36	tail completion	connector
eggNOG-mapper	UHGV-0367362_34	411902.CLOBOL_00130	112.0	7.65e-30	N/A	N/A
structural_annotation	UHGV-0367362_34	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_35	phrog_3099	148.7	2.66247e-44	N/A	unknown function
eggNOG-mapper	UHGV-0367362_35	1160721.RBI_II00532	206.0	0	N/A	N/A
structural_annotation	UHGV-0367362_35	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_36	phrog_11299	184.7	0	N/A	unknown function
structural_annotation	UHGV-0367362_36	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_37	phrog_706	146.0	2.10195e-43	N/A	unknown function
UniRef90	UHGV-0367362_37	UniRef90_UPI001B3C82AE	213.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0367362_37	1449050.JNLE01000003_gene3882	194.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0367362_37	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0367362_37	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_38	phrog_1535	587.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0367362_38	UniRef90_R6TDK7	726.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0367362_38	1160721.RBI_II00528	468.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0367362_38	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-0367362_38	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_39	phrog_1194	91.6	6.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0367362_39	1160721.RBI_II00527	206.0	0	N/A	N/A
structural_annotation	UHGV-0367362_39	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_40	phrog_9680	53.4	1.4e-16	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0367362_40	1160721.RBI_II00526	526.0	0	N/A	N/A
structural_annotation	UHGV-0367362_40	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0367362_44	phrog_13256	81.0	7.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0367362_44	1160721.RBI_II00522	131.0	1.96e-39	N/A	N/A
KOfam	UHGV-0367362_45	K07273	183.3	0	acm; lysozyme	N/A
PHROG	UHGV-0367362_45	phrog_291	147.4	1.09301e-43	endolysin	lysis
UniRef90	UHGV-0367362_45	UniRef90_W0U9I6	597.0	0	Endolysin (Glycoside Hydrolase Family 25 protein )	N/A
eggNOG-mapper	UHGV-0367362_45	1160721.RBI_II00521	597.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0367362_45	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0367362_45	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0367362_45	PF01183,PF01471,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-0367362_47	K06223	227.1	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0367362_47	phrog_56	211.2	0	DNA methyltransferase	other
UniRef90	UHGV-0367362_47	UniRef90_W0U9G5	505.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-0367362_47	1160721.RBI_II00519	505.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0367362_47	MTase_II_00039	140.1	3.09995e-41	Type II methyltransferase	RM
Pfam	UHGV-0367362_47	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
NCBIFam	UHGV-0367362_47	TIGR00571.1	N/A	N/A	Dam family site-specific DNA-(adenine-N6)-methyltransferase	N/A
COG	UHGV-0367362_47	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0367362_47	PF02086,MF_00934,TIGR00571,COG0338	N/A	N/A	N/A	N/A
KOfam	UHGV-0367362_48	K07727	68.8	1.3e-19	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0367362_48	phrog_3	44.6	0.0000000000057	transcriptional repressor	transcription regulation
UniRef90	UHGV-0367362_48	UniRef90_W0U882	126.0	4.87e-37	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0367362_48	1160721.RBI_II00518	126.0	8.17e-38	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0367362_48	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0367362_48	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0367362_48	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
COG	UHGV-0367362_49	COG2304	N/A	N/A	Secreted protein containing bacterial Ig-like domain and vWFA domain	N/A
UniRef90	UHGV-0367362_50	UniRef90_A0A374G8L0	406.0	0	CBM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0367362_50	697329.Rumal_1420	137.0	1.34e-34	von Willebrand factor type A domain	N/A
Pfam	UHGV-0367362_50	PF00553	N/A	N/A	Cellulose binding domain	CBM_2
COG	UHGV-0367362_50	COG1361	N/A	N/A	S-layer protein MJ0795, predicted component of type IV pili-like system	N/A