UHGV-0377234 (vOTU-051345)

Viral Genome: UHGV-0377234

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0377234
vOTU ID	vOTU-051345
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_293259_round1256~3223302
Associated BioSample	SAMN01760939
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9663
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	43.24
Jumbo phage	No

Genome content
Genome length (bp)	38,367
GC content	36.61%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	92%
Average CDS length (bps)	662.89
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0377234_1	UniRef90_A0A6H1F518	60.5	0.000000000071	N/A	N/A
eggNOG-mapper	UHGV-0377234_1	562981.HMPREF0428_01862	60.5	0.0000000000119	N/A	N/A
Pfam	UHGV-0377234_1	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0377234_1	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0377234_2	COG5570	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_4	phrog_750	54.4	0.0000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0377234_4	742723.HMPREF9477_00931	49.7	0.00000265	N/A	N/A
structural_annotation	UHGV-0377234_4	PF13835,NF040858	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_9	phrog_3584	165.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0377234_9	642492.Clole_0725	150.0	8.12052e-42	N/A	N/A
structural_annotation	UHGV-0377234_9	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0377234_10	K03469	65.5	1.2e-18	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0377234_10	phrog_531	63.5	3.9e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377234_10	UniRef90_A0A413YU26	275.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0377234_10	1121447.JONL01000002_gene2134	73.6	0.0000000000000189	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0377234_10	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0377234_10	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0377234_10	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377234_11	PF02179,NF011863	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_13	phrog_7566	94.5	7.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-0377234_13	1235800.C819_00511	103.0	1.04e-25	N/A	N/A
KOfam	UHGV-0377234_15	K07319	90.3	1.7e-26	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0377234_15	phrog_16	227.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377234_15	UniRef90_A0A356C6C6	1483.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-0377234_15	1298920.KI911353_gene2709	1392.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0377234_15	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0377234_15	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0377234_15	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0377234_15	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0377234_16	K00558	230.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0377234_16	phrog_116	265.9	0	DNA methyltransferase	other
UniRef90	UHGV-0377234_16	UniRef90_A0A174GZ53	927.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0377234_16	1235800.C819_02255	715.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0377234_16	MTase_II_00020	114.9	2.8e-36	Type II methyltransferase	RM
Pfam	UHGV-0377234_16	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0377234_16	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0377234_16	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_20	phrog_2118	105.3	5.9e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377234_20	UniRef90_A0A2U2EKN9	224.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0377234_20	1235799.C818_02668	171.0	0	endonuclease activity	N/A
Pfam	UHGV-0377234_20	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0377234_20	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0377234_20	PF13395,TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_22	phrog_20593	78.8	2.3e-23	N/A	unknown function
PHROG	UHGV-0377234_23	phrog_625	61.7	6.7e-18	N/A	unknown function
UniRef90	UHGV-0377234_23	UniRef90_A0A413YU40	242.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0377234_23	397290.C810_01502	126.0	1.05e-35	N/A	N/A
structural_annotation	UHGV-0377234_23	PF12961,COG2028	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_24	phrog_36	50.8	0.000000000000036	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0377234_24	411490.ANACAC_00789	58.5	0.0000000103	N/A	N/A
structural_annotation	UHGV-0377234_24	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0377234_25	K07474	135.2	7.4e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0377234_25	phrog_2606	300.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0377234_25	UniRef90_A0A6B4XMY8	293.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0377234_25	1415774.U728_838	293.0	0	terminase, small subunit	N/A
Pfam	UHGV-0377234_25	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-0377234_25	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0377234_25	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0377234_25	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0377234_26	K06909	226.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0377234_26	phrog_2	115.1	9.9e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0377234_26	UniRef90_UPI0015714730	623.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0377234_26	1235799.C818_04217	606.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0377234_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0377234_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0377234_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0377234_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_27	phrog_533	394.3	0	portal protein	head and packaging
UniRef90	UHGV-0377234_27	UniRef90_UPI00156E473F	573.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0377234_27	411461.DORFOR_00749	494.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-0377234_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0377234_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_28	phrog_581	217.9	0	minor head protein	head and packaging
UniRef90	UHGV-0377234_28	UniRef90_A0A3C2B9H7	269.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0377234_28	1449050.JNLE01000003_gene3892	219.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0377234_28	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0377234_28	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0377234_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377234_28	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_29	phrog_581	92.6	5e-27	minor head protein	head and packaging
eggNOG-mapper	UHGV-0377234_29	1449050.JNLE01000003_gene3892	132.0	2.46e-35	Phage minor capsid protein 2	N/A
Pfam	UHGV-0377234_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0377234_29	COG2369	N/A	N/A	N/A	N/A
KOfam	UHGV-0377234_30	K07584	86.6	3.5e-25	N/A	N/A
PHROG	UHGV-0377234_30	phrog_4478	69.7	3.4e-20	peptidase	other
UniRef90	UHGV-0377234_30	UniRef90_A0A2Z4UEY6	78.2	9.06e-17	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0377234_30	411470.RUMGNA_03236	71.2	0.00000000000000728	Cysteine protease Prp	N/A
Pfam	UHGV-0377234_30	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0377234_30	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377234_30	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_31	phrog_2303	105.9	4.1e-31	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0377234_31	1235792.C808_05367	144.0	4.33996e-41	N/A	N/A
structural_annotation	UHGV-0377234_31	PF10788,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_32	phrog_10	183.7	0	major head protein	head and packaging
UniRef90	UHGV-0377234_32	UniRef90_UPI00164B7107	432.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0377234_32	411461.DORFOR_00744	434.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-0377234_32	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0377234_32	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0377234_32	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0377234_32	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_33	phrog_541	85.5	5.3e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0377234_33	1449050.JNLE01000003_gene3888	88.6	5.88e-21	N/A	N/A
PHROG	UHGV-0377234_35	phrog_3366	72.7	2.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0377234_35	1449050.JNLE01000003_gene3887	96.7	2.9e-24	N/A	N/A
Pfam	UHGV-0377234_35	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0377234_35	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_36	phrog_556	91.3	7.6e-27	minor head protein	head and packaging
UniRef90	UHGV-0377234_36	UniRef90_A0A1M7NJ72	114.0	5.16e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0377234_36	1304866.K413DRAFT_3041	124.0	9.43e-35	N/A	N/A
Pfam	UHGV-0377234_36	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0377234_36	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_37	phrog_3266	71.9	8.2e-21	tail completion	connector
eggNOG-mapper	UHGV-0377234_37	1449050.JNLE01000003_gene3885	106.0	1.88e-27	N/A	N/A
structural_annotation	UHGV-0377234_37	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_38	phrog_3099	152.5	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0377234_38	1160721.RBI_II00532	209.0	0	N/A	N/A
structural_annotation	UHGV-0377234_38	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_39	phrog_11299	111.5	6.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-0377234_39	1298920.KI911353_gene2067	103.0	4.01e-26	N/A	N/A
PHROG	UHGV-0377234_40	phrog_706	135.6	3.4e-40	N/A	unknown function
UniRef90	UHGV-0377234_40	UniRef90_UPI0011DC8B0C	190.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0377234_40	1304866.K413DRAFT_3045	180.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0377234_40	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0377234_40	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_41	phrog_1535	147.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0377234_41	UniRef90_A0A1I2KTM2	97.1	7.78e-17	Phage-related protein	N/A
eggNOG-mapper	UHGV-0377234_41	1449050.JNLE01000003_gene3881	141.0	2.71e-31	domain protein	N/A
COG	UHGV-0377234_41	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_42	phrog_1194	65.7	6e-19	N/A	unknown function
structural_annotation	UHGV-0377234_42	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_43	phrog_6616	269.9	0	tail protein	tail
UniRef90	UHGV-0377234_43	UniRef90_A0A3D3U8S7	137.0	2.03e-30	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0377234_43	33035.JPJF01000043_gene1002	149.0	6.63e-35	N/A	N/A
eggNOG-mapper	UHGV-0377234_44	476272.RUMHYD_01994	65.5	0.00000000874	N/A	N/A
PHROG	UHGV-0377234_45	phrog_199	71.4	1.2e-20	holin	lysis
UniRef90	UHGV-0377234_45	UniRef90_A0A356C4Q2	240.0	0	Holin	N/A
eggNOG-mapper	UHGV-0377234_45	483218.BACPEC_01140	211.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0377234_45	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0377234_45	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0377234_45	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0377234_45	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0377234_46	K02395	45.7	0.00000000000066	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0377234_46	phrog_3513	56.7	2.5e-16	endolysin	lysis
UniRef90	UHGV-0377234_46	UniRef90_R5ZWS5	601.0	0	Peptidoglycan hydrolase	N/A
Pfam	UHGV-0377234_46	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-0377234_46	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0377234_46	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-0377234_46	PF08230,NF004974,COG1705	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_47	phrog_1281	131.5	4e-39	N/A	unknown function
UniRef90	UHGV-0377234_47	UniRef90_UPI00164A9B39	149.0	2.84464e-43	N/A	N/A
eggNOG-mapper	UHGV-0377234_47	1508644.SFBmNL_01513	143.0	9.3901e-42	N/A	N/A
Pfam	UHGV-0377234_47	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0377234_47	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377234_47	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_48	phrog_5763	86.2	4.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0377234_48	1033744.CAEL01000026_gene1411	111.0	2.92e-26	N/A	N/A
KOfam	UHGV-0377234_49	K06400	367.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0377234_49	phrog_95	358.2	0	integrase	integration and excision
UniRef90	UHGV-0377234_49	UniRef90_A0A413YU13	910.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0377234_49	411462.DORLON_00823	455.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0377234_49	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0377234_49	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0377234_49	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0377234_49	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0377234_49	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0377234_50	phrog_2158	189.3	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0377234_50	UniRef90_B0MB90	244.0	0	Abi-like protein	N/A
eggNOG-mapper	UHGV-0377234_50	411490.ANACAC_00817	244.0	0	Abi-like protein	N/A
PADLOC	UHGV-0377234_50	AbiD	127.0	4.1e-37	AbiD	Abi
Pfam	UHGV-0377234_50	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0377234_50	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0377234_50	PF07751,COG4823	N/A	N/A	N/A	N/A
KOfam	UHGV-0377234_52	K01356	155.7	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0377234_52	phrog_4	128.6	5.8e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-0377234_52	UniRef90_A0A373LXV0	274.0	0	LexA family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0377234_52	411490.ANACAC_00815	243.0	0	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0377234_52	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0377234_52	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0377234_52	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0377234_52	PF00717,PF12844,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0377234_53	K14056	48.1	0.00000000000018	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-0377234_53	phrog_3	45.4	0.0000000000032	transcriptional repressor	transcription regulation
UniRef90	UHGV-0377234_53	UniRef90_A0A6L6XFS5	110.0	2.25e-30	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0377234_53	936375.HMPREF1152_1045	88.6	2.55e-22	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0377234_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0377234_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A