UHGV-0377992 (vOTU-045440)

Viral Genome: UHGV-0377992

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0377992
vOTU ID	vOTU-045440
Representative Genome?	Yes
Source	Benler
Original genome ID	OGZO01000184.1
Associated BioSample	SAMEA3541516
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9804
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.33
Jumbo phage	No

Genome content
Genome length (bp)	41,392
GC content	43.04%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	68
CDS density	94%
Average CDS length (bps)	570.49
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0377992_2	phrog_5	81.2	1.7e-23	tail completion or Neck1 protein	connector
UniRef90	UHGV-0377992_2	UniRef90_A0A3A9EIF3	164.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0377992_2	1280685.AUKC01000004_gene1630	124.0	1.29e-34	N/A	N/A
Pfam	UHGV-0377992_2	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0377992_2	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0377992_2	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_3	phrog_595	127.5	1.6e-37	head maturation protease	head and packaging
UniRef90	UHGV-0377992_3	UniRef90_A0A285PUG1	292.0	0	Phage head morphogenesis domain	N/A
eggNOG-mapper	UHGV-0377992_3	1280685.AUKC01000004_gene1632	171.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0377992_3	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0377992_3	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0377992_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377992_3	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_4	phrog_64	164.4	0	portal protein	head and packaging
UniRef90	UHGV-0377992_4	UniRef90_A0A856HZB4	462.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0377992_4	673376.F2VHW1_9CAUD	225.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0377992_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0377992_4	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0377992_5	K06909	139.3	4.00001e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0377992_5	phrog_10250	182.0	0	N/A	unknown function
UniRef90	UHGV-0377992_5	UniRef90_UPI00059A8066	590.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0377992_5	903814.ELI_3215	575.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0377992_5	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0377992_5	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0377992_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0377992_5	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0377992_6	K07474	116.0	6.2e-34	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0377992_6	phrog_2606	331.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0377992_6	UniRef90_A0A416BKP7	360.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0377992_6	478749.BRYFOR_07604	302.0	0	terminase, small subunit	N/A
Pfam	UHGV-0377992_6	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-0377992_6	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0377992_6	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0377992_6	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
COG	UHGV-0377992_8	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0377992_8	PF05225,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_10	phrog_7566	98.4	4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0377992_10	411471.SUBVAR_05830	86.3	1.2e-20	N/A	N/A
PHROG	UHGV-0377992_14	phrog_9804	103.7	1.8e-30	N/A	unknown function
UniRef90	UHGV-0377992_14	UniRef90_A0A1C5T9U7	107.0	4.17e-26	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-0377992_14	585394.RHOM_14005	94.7	8.51e-22	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0377992_14	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
PHROG	UHGV-0377992_15	phrog_10469	191.6	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377992_15	UniRef90_A0A3R6NS16	241.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0377992_15	457412.RSAG_04664	171.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-0377992_15	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0377992_15	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0377992_15	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_17	phrog_72	54.9	0.0000000000000015	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0377992_17	1304866.K413DRAFT_1197	112.0	8.41e-29	N/A	N/A
KOfam	UHGV-0377992_19	K03111	126.0	5.1e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0377992_19	phrog_44	126.4	2.5e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377992_19	UniRef90_R6Z8U9	193.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0377992_19	796942.HMPREF9623_02068	187.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0377992_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0377992_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0377992_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0377992_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0377992_19	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_20	phrog_14970	242.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0377992_20	411469.EUBHAL_02677	196.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0377992_20	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0377992_20	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0377992_20	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_22	phrog_253	107.8	9.8e-32	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377992_22	UniRef90_A0A6L5Y0Q6	113.0	4.81e-29	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0377992_22	411470.RUMGNA_02192	109.0	2.45e-28	Siphovirus Gp157	N/A
Pfam	UHGV-0377992_22	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0377992_22	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377992_23	COG4481	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_27	phrog_463	186.3	0	anti-repressor	transcription regulation
eggNOG-mapper	UHGV-0377992_27	1304866.K413DRAFT_1188	163.0	6.72623e-44	AntA/AntB antirepressor	N/A
Pfam	UHGV-0377992_27	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0377992_27	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0377992_27	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0377992_27	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-0377992_35	K22300	60.9	2.9e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0377992_35	phrog_8	51.8	0.00000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-0377992_35	UniRef90_A0A4S2A8B1	101.0	5.03e-25	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0377992_35	748224.HMPREF9436_01444	95.1	4e-23	N/A	N/A
PADLOC	UHGV-0377992_35	retron_type_VI_hth_cluster2_1	44.4	0.0000000000035	N/A	Retron
Pfam	UHGV-0377992_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0377992_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0377992_35	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0377992_36	K22300	56.3	7.7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0377992_36	phrog_2967	52.2	0.000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0377992_36	UniRef90_A0A564SVW9	62.8	0.000000000467	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0377992_36	742817.HMPREF9449_00303	56.6	0.0000000184	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0377992_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0377992_36	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0377992_38	K06400	269.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0377992_38	phrog_95	280.5	0	integrase	integration and excision
UniRef90	UHGV-0377992_38	UniRef90_A0A285PUJ0	328.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0377992_38	357809.Cphy_2997	241.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0377992_38	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0377992_38	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0377992_38	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0377992_38	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_40	phrog_374	72.2	1.6e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377992_40	UniRef90_F9MRE0	110.0	9.97e-26	AP2 domain protein	N/A
eggNOG-mapper	UHGV-0377992_40	879308.HMPREF9130_0377	110.0	1.67e-26	N/A	N/A
structural_annotation	UHGV-0377992_40	PF18337,PF00847	N/A	N/A	N/A	N/A
KOfam	UHGV-0377992_41	K07726	44.6	0.0000000000027	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0377992_41	phrog_25567	40.1	0.000000000055	N/A	unknown function
UniRef90	UHGV-0377992_41	UniRef90_A0A416SH94	62.8	0.00000000000771	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0377992_41	1410625.JHWK01000002_gene45	60.5	0.0000000000148	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0377992_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0377992_41	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0377992_41	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377992_43	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_44	phrog_20016	91.5	6.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0377992_44	397290.C810_05214	62.4	0.000000000183	N/A	N/A
structural_annotation	UHGV-0377992_44	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_45	phrog_16490	70.7	3.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0377992_45	397290.C810_05212	104.0	1.57e-23	N/A	N/A
PHROG	UHGV-0377992_46	phrog_22984	68.1	1.3e-19	N/A	unknown function
PHROG	UHGV-0377992_47	phrog_21718	72.0	9.6e-21	N/A	unknown function
UniRef90	UHGV-0377992_47	UniRef90_A0A285PT36	117.0	1.29e-30	Consensus disorder prediction	N/A
eggNOG-mapper	UHGV-0377992_47	476272.RUMHYD_01768	56.6	0.0000000606	N/A	N/A
PHROG	UHGV-0377992_48	phrog_3754	90.5	2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0377992_48	476272.RUMHYD_01764	157.0	0	N/A	N/A
UniRef90	UHGV-0377992_49	UniRef90_A0A2G3DT78	189.0	0	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0377992_49	1336241.JAEB01000003_gene341	172.0	0	N/A	N/A
Pfam	UHGV-0377992_49	PF13248	N/A	N/A	zinc-ribbon domain	zf-ribbon_3
UniRef90	UHGV-0377992_51	UniRef90_A0A285PXT6	82.8	4.98e-19	Winged helix-turn-helix DNA-binding domain	N/A
PHROG	UHGV-0377992_53	phrog_14030	133.4	1.4e-39	N/A	unknown function
UniRef90	UHGV-0377992_53	UniRef90_G5FC83	181.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0377992_53	411461.DORFOR_00720	172.0	0	N/A	N/A
structural_annotation	UHGV-0377992_53	PF08239,NF040678,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_54	phrog_443	59.5	9.9e-17	holin	lysis
UniRef90	UHGV-0377992_54	UniRef90_Q48T76	76.6	3.07e-17	N/A	N/A
eggNOG-mapper	UHGV-0377992_54	1314.HKU360_01470	79.7	3.1e-19	N/A	N/A
Pfam	UHGV-0377992_54	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0377992_54	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_55	phrog_1863	63.6	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0377992_55	1226322.HMPREF1545_04027	65.9	0.000000000000407	N/A	N/A
KOfam	UHGV-0377992_56	K10804	41.3	0.000000000018	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0377992_56	phrog_5240	82.4	4.8e-24	tail fiber protein	tail
Pfam	UHGV-0377992_56	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0377992_56	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0377992_56	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0377992_57	phrog_1067	299.7	0	minor head protein	head and packaging
UniRef90	UHGV-0377992_57	UniRef90_A0A7G9G6Y3	395.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0377992_57	1123263.AUKY01000068_gene489	313.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0377992_57	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0377992_57	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-0377992_57	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0377992_57	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0377992_57	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_58	phrog_33	82.2	1.1e-23	distal tail protein Dit	tail
UniRef90	UHGV-0377992_58	UniRef90_A0A173Z1X4	196.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0377992_58	1160721.RBI_I01575	160.0	0	Phage tail protein	N/A
COG	UHGV-0377992_58	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0377992_58	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_59	phrog_1272	220.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0377992_59	641112.ACOK01000073_gene2904	244.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0377992_59	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0377992_59	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0377992_59	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0377992_62	phrog_885	80.0	2.8e-23	major tail protein	tail
UniRef90	UHGV-0377992_62	UniRef90_A0A843J9F0	172.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0377992_62	1111121.HMPREF1247_0789	185.0	0	N/A	N/A
structural_annotation	UHGV-0377992_62	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377992_63	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_64	phrog_1233	74.1	2.1e-21	N/A	unknown function
UniRef90	UHGV-0377992_64	UniRef90_UPI001C39EFB9	77.8	3.89e-16	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-0377992_64	936375.HMPREF1152_1074	94.7	1.32e-23	N/A	N/A
PHROG	UHGV-0377992_65	phrog_17977	81.3	8.7e-24	N/A	unknown function
UniRef90	UHGV-0377992_65	UniRef90_A0A285PT57	137.0	7.28e-40	Phage head-tail joining protein	N/A
structural_annotation	UHGV-0377992_65	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0377992_67	phrog_247	273.3	0	major head protein	head and packaging
UniRef90	UHGV-0377992_67	UniRef90_UPI001E4E7823	345.0	0	phage coat protein	N/A
eggNOG-mapper	UHGV-0377992_67	445335.CBN_1379	324.0	0	N/A	N/A
COG	UHGV-0377992_67	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0377992_67	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A