UHGV-0381378 (vOTU-144535)

Viral Genome: UHGV-0381378

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0381378
vOTU ID	vOTU-144535
Representative Genome?	Yes
Source	mMGE
Original genome ID	k119_205299_round1256~548614
Associated BioSample	SAMN07688528
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.3 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9801
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.53
Jumbo phage	No

Genome content
Genome length (bp)	28,576
GC content	41.14%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	38
CDS density	90%
Average CDS length (bps)	676.82
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0381378_1	K03091	107.1	2.6e-31	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-0381378_1	phrog_351	98.8	6e-29	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0381378_1	UniRef90_A0A351USI3	169.0	0	Sporulation sigma factor SigG (Fragment)	N/A
eggNOG-mapper	UHGV-0381378_1	742723.HMPREF9477_00112	172.0	0	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	N/A
PADLOC	UHGV-0381378_1	MzaA_00001	40.1	0.000000000051	NA	mzaABCDE
Pfam	UHGV-0381378_1	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
NCBIFam	UHGV-0381378_1	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0381378_1	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0381378_1	PF04542,MF_04164,TIGR02846	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_3	phrog_355	56.4	4.5e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0381378_3	UniRef90_A0A396KGT7	205.0	0	N/A	N/A
eggNOG-mapper	UHGV-0381378_3	97138.C820_00250	129.0	1.01e-37	N/A	N/A
Pfam	UHGV-0381378_3	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0381378_3	PF14359,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0381378_4	K07474	104.3	2.2e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0381378_4	phrog_51	119.3	2.7e-35	terminase small subunit	head and packaging
UniRef90	UHGV-0381378_4	UniRef90_A0A414QMP8	229.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0381378_4	476272.RUMHYD_01754	111.0	1.52e-29	Terminase small subunit	N/A
Pfam	UHGV-0381378_4	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0381378_4	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0381378_4	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0381378_5	K06909	118.4	7.9e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0381378_5	phrog_2	162.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0381378_5	UniRef90_A0A3R6JYR2	831.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0381378_5	397290.C810_05187	667.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0381378_5	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0381378_5	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0381378_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0381378_5	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_6	phrog_533	257.8	0	portal protein	head and packaging
UniRef90	UHGV-0381378_6	UniRef90_A0A173R9C0	622.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0381378_6	476272.RUMHYD_01758	668.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0381378_6	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_7	phrog_581	255.5	0	minor head protein	head and packaging
UniRef90	UHGV-0381378_7	UniRef90_A0A414QMN0	792.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0381378_7	476272.RUMHYD_01761	458.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0381378_7	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0381378_7	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0381378_7	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0381378_8	UniRef90_A0A416S3A4	110.0	8.1e-29	CTP synthase	N/A
eggNOG-mapper	UHGV-0381378_8	476272.RUMHYD_01766	52.4	0.000000314	N/A	N/A
PHROG	UHGV-0381378_9	phrog_21718	75.2	9.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0381378_9	1235790.C805_00058	93.2	8.02e-22	N/A	N/A
eggNOG-mapper	UHGV-0381378_11	476272.RUMHYD_01770	84.3	3.9e-17	N/A	N/A
PHROG	UHGV-0381378_12	phrog_20016	74.1	1.4e-21	N/A	unknown function
UniRef90	UHGV-0381378_12	UniRef90_A0A316MV88	199.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0381378_12	1226322.HMPREF1545_00077	63.9	0.0000000000591	N/A	N/A
structural_annotation	UHGV-0381378_12	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0381378_13	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_15	phrog_194	79.6	5.1e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0381378_15	UniRef90_UPI001D14C9C8	195.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0381378_15	476272.RUMHYD_01775	166.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0381378_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0381378_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_16	phrog_247	275.8	0	major head protein	head and packaging
UniRef90	UHGV-0381378_16	UniRef90_A0A3R6GHE6	775.0	0	Phage coat protein	N/A
eggNOG-mapper	UHGV-0381378_16	1292035.H476_1014	414.0	0	N/A	N/A
Pfam	UHGV-0381378_16	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
COG	UHGV-0381378_16	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0381378_16	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_17	phrog_541	101.5	5.2e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-0381378_17	476272.RUMHYD_01778	191.0	0	N/A	N/A
PHROG	UHGV-0381378_18	phrog_3366	59.5	2.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0381378_18	476272.RUMHYD_01779	171.0	0	N/A	N/A
structural_annotation	UHGV-0381378_18	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_19	phrog_556	67.3	2e-19	minor head protein	head and packaging
UniRef90	UHGV-0381378_19	UniRef90_UPI0008B4CFF0	143.0	9.19994e-41	minor capsid protein	N/A
eggNOG-mapper	UHGV-0381378_19	476272.RUMHYD_01780	214.0	0	N/A	N/A
Pfam	UHGV-0381378_19	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0381378_19	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_20	phrog_3266	94.3	9.1e-28	tail completion	connector
eggNOG-mapper	UHGV-0381378_20	476272.RUMHYD_01781	225.0	0	N/A	N/A
structural_annotation	UHGV-0381378_20	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_21	phrog_3099	125.8	3.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0381378_21	476272.RUMHYD_01782	251.0	0	N/A	N/A
structural_annotation	UHGV-0381378_21	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_22	phrog_11299	114.9	5.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0381378_22	411459.RUMOBE_01382	95.1	5.43e-23	N/A	N/A
structural_annotation	UHGV-0381378_22	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_23	phrog_706	125.3	3.6e-37	N/A	unknown function
UniRef90	UHGV-0381378_23	UniRef90_UPI00156F9D1C	268.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0381378_23	476272.RUMHYD_01784	219.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0381378_23	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0381378_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_24	phrog_1535	317.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0381378_24	UniRef90_A0A1C5N853	187.0	2.8026e-45	Phage-related protein	N/A
eggNOG-mapper	UHGV-0381378_24	476272.RUMHYD_01785	214.0	0	phage tail tape measure protein	N/A
COG	UHGV-0381378_24	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_25	phrog_1194	62.5	6.6e-18	N/A	unknown function
structural_annotation	UHGV-0381378_25	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_26	phrog_6616	519.9	0	tail protein	tail
UniRef90	UHGV-0381378_26	UniRef90_A0A173R8I5	431.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0381378_26	33035.JPJF01000043_gene1002	359.0	0	N/A	N/A
structural_annotation	UHGV-0381378_26	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_27	phrog_18444	82.4	3.2e-24	N/A	unknown function
UniRef90	UHGV-0381378_27	UniRef90_UPI00156E9A45	132.0	4.37e-39	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-0381378_27	1294142.CINTURNW_1707	50.4	0.000000155	N/A	N/A
eggNOG-mapper	UHGV-0381378_28	476272.RUMHYD_00002	124.0	1.57e-26	N/A	N/A
PHROG	UHGV-0381378_29	phrog_2310	41.4	0.000000000015	N/A	unknown function
PHROG	UHGV-0381378_30	phrog_1129	82.7	2.6e-24	holin	lysis
UniRef90	UHGV-0381378_30	UniRef90_A0A893W7Y5	168.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0381378_30	411460.RUMTOR_01325	133.0	2.25e-39	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0381378_30	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0381378_30	PF16079	N/A	N/A	N/A	N/A
KOfam	UHGV-0381378_31	K07273	187.5	0	acm; lysozyme	N/A
PHROG	UHGV-0381378_31	phrog_291	205.8	0	endolysin	lysis
UniRef90	UHGV-0381378_31	UniRef90_A0A174IKV4	596.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0381378_31	521003.COLINT_02363	323.0	0	CW_7 repeat	N/A
Pfam	UHGV-0381378_31	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0381378_31	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0381378_31	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0381378_31	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0381378_31	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0381378_32	phrog_806	95.7	5.9e-28	N/A	unknown function
UniRef90	UHGV-0381378_32	UniRef90_A0A3R6HPM4	337.0	0	N/A	N/A
eggNOG-mapper	UHGV-0381378_32	476272.RUMHYD_01730	187.0	0	N/A	N/A
Pfam	UHGV-0381378_32	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0381378_32	PF11611,MF_00791,NF041178,COG2967	N/A	N/A	N/A	N/A
UniRef90	UHGV-0381378_33	UniRef90_UPI00156F4263	100.0	6.09e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0381378_33	471875.RUMLAC_01755	75.5	1.27e-16	sequence-specific DNA binding	N/A
COG	UHGV-0381378_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0381378_34	phrog_4	45.1	0.000000000002	transcriptional repressor	transcription regulation
UniRef90	UHGV-0381378_34	UniRef90_A0A416RX34	302.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0381378_34	742765.HMPREF9457_02739	301.0	0	N/A	N/A
Pfam	UHGV-0381378_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0381378_34	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
structural_annotation	UHGV-0381378_34	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0381378_37	K18830	42.9	0.0000000000093	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0381378_37	phrog_8	64.4	2.5e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0381378_37	UniRef90_A0A8D9UIK2	162.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0381378_37	1235790.C805_00362	88.6	8.13e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0381378_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0381378_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0381378_37	PF13560,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0381378_38	UniRef90_A0A1Q6KAH5	119.0	5.47e-34	N/A	N/A
eggNOG-mapper	UHGV-0381378_38	1121335.Clst_0370	93.6	1.46e-24	N/A	N/A
Pfam	UHGV-0381378_38	PF02954	N/A	N/A	Bacterial regulatory protein, Fis family	HTH_8
structural_annotation	UHGV-0381378_38	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A