UHGV-0382144 (vOTU-046008)

Viral Genome: UHGV-0382144

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0382144
vOTU ID	vOTU-046008
Representative Genome?	Yes
Source	Benler
Original genome ID	OFMT01000319.1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9818
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	62.66
Jumbo phage	No

Genome content
Genome length (bp)	44,691
GC content	40.85%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	91%
Average CDS length (bps)	643.62
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0382144_2	K00571	94.5	1.2e-27	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0382144_2	phrog_23224	242.1	0	DNA methyltransferase	other
UniRef90	UHGV-0382144_2	UniRef90_A0A3A6GQN4	496.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0382144_2	1214217.ALNF01000014_gene1390	270.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-0382144_2	MTase_II_00157	56.0	3.6e-24	Type II methyltransferase	RM
Pfam	UHGV-0382144_2	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0382144_2	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0382144_2	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_3	phrog_8684	97.6	5e-29	N/A	unknown function
UniRef90	UHGV-0382144_3	UniRef90_A0A3A6GQT2	196.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0382144_3	457412.RSAG_01162	95.1	6.67e-23	YopX protein	N/A
Pfam	UHGV-0382144_3	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0382144_3	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0382144_3	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-0382144_6	UniRef90_UPI0006DCB293	100.0	5.11e-26	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0382144_6	411490.ANACAC_02386	87.0	7.89e-20	Phosphoadenosine phosphosulfate reductase	N/A
COG	UHGV-0382144_6	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-0382144_8	K15255	247.9	0	PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]	N/A
PHROG	UHGV-0382144_8	phrog_325	265.7	0	Dda-like helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0382144_8	UniRef90_A0A2V2D011	878.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0382144_8	1121333.JMLH01000003_gene334	273.0	0	PIF1-like helicase	N/A
PADLOC	UHGV-0382144_8	cluster10	56.5	5.9e-19	RecD_0_IVD	CRISPR-CAS
Pfam	UHGV-0382144_8	PF05970	N/A	N/A	PIF1-like helicase	PIF1
COG	UHGV-0382144_8	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0382144_8	PF05970,PF18350,MF_03176,TIGR02768,COG0507	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_9	phrog_8841	492.1	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0382144_9	UniRef90_A0A3A6GQS5	1275.0	0	N/A	N/A
eggNOG-mapper	UHGV-0382144_9	411460.RUMTOR_02070	531.0	0	N/A	N/A
Pfam	UHGV-0382144_9	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0382144_9	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0382144_9	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0382144_9	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0382144_10	K02316	74.7	1.3e-21	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0382144_10	phrog_11992	126.8	1.8e-37	N/A	unknown function
UniRef90	UHGV-0382144_10	UniRef90_A0A3A6GSV7	334.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0382144_10	411460.RUMTOR_02069	125.0	2.97e-34	CHC2 zinc finger	N/A
PADLOC	UHGV-0382144_10	drt-UG29	45.0	0.00000000000084	DRT	DRT
Pfam	UHGV-0382144_10	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0382144_10	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0382144_10	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_11	phrog_3490	143.8	8.09951e-43	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0382144_11	UniRef90_UPI00156FB923	193.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0382144_11	1256908.HMPREF0373_00660	194.0	0	N/A	N/A
Pfam	UHGV-0382144_11	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0382144_11	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_12	phrog_314	85.8	2.4e-25	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0382144_12	UniRef90_A0A8D9UHJ5	89.7	3.56e-17	Intron associated endonuclease	N/A
eggNOG-mapper	UHGV-0382144_12	1399942.U3PCR9_9CAUD	86.7	2.17e-17	NUMOD3 motif (2 copies)	N/A
Pfam	UHGV-0382144_12	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-0382144_12	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-0382144_12	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-0382144_12	PF19835,PF07453,TIGR01453,COG2827	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_13	phrog_18107	259.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0382144_13	397290.C810_05167	242.0	0	N/A	N/A
structural_annotation	UHGV-0382144_13	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_14	phrog_2872	199.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0382144_14	UniRef90_UPI0011CB4DA4	289.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0382144_14	1415774.U728_1119	255.0	0	AAA domain	N/A
Pfam	UHGV-0382144_14	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0382144_14	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_15	phrog_59	131.8	2.9e-39	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0382144_15	UniRef90_A0A1H0H3E1	150.0	4.40008e-43	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0382144_15	1206110.L0P6F5_9CAUD	136.0	6.21e-38	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-0382144_15	HEase_00016	87.4	5.9e-26	homing endonuclease	RM
Pfam	UHGV-0382144_15	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0382144_15	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0382144_15	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
UniRef90	UHGV-0382144_16	UniRef90_R6RDX0	79.0	5.26e-18	Arginyl-tRNA synthetase	N/A
structural_annotation	UHGV-0382144_17	NF001645	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0382144_21	cluster_17974	57.8	0.00000000000000767	NA	N/A
PHROG	UHGV-0382144_22	phrog_6058	53.6	0.0000000000000021	N/A	unknown function
UniRef90	UHGV-0382144_22	UniRef90_A0A2V1JQ38	64.3	0.0000000000224	Glycogen synthase	N/A
eggNOG-mapper	UHGV-0382144_22	742733.HMPREF9469_05094	62.4	0.0000000000214	N/A	N/A
structural_annotation	UHGV-0382144_24	COG1321	N/A	N/A	N/A	N/A
UniRef90	UHGV-0382144_25	UniRef90_A0A4Q5ERT3	206.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0382144_25	397290.C810_01441	77.8	6.93e-17	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0382144_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0382144_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0382144_25	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0382144_28	UniRef90_A0A3A6GQZ1	186.0	0	Zinc ribbon domain-containing protein	N/A
COG	UHGV-0382144_28	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0382144_29	K14059	99.9	3.6e-29	int; integrase	N/A
PHROG	UHGV-0382144_29	phrog_1	128.5	6.7e-38	integrase	integration and excision
UniRef90	UHGV-0382144_29	UniRef90_A0A6L8SXX0	796.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0382144_29	1235792.C808_05256	353.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0382144_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0382144_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0382144_29	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0382144_30	K07273	202.0	0	acm; lysozyme	N/A
PHROG	UHGV-0382144_30	phrog_6745	183.6	0	endolysin	lysis
UniRef90	UHGV-0382144_30	UniRef90_A0A6L8SXR6	909.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0382144_30	457412.RSAG_00790	669.0	0	CHAP domain	N/A
Pfam	UHGV-0382144_30	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0382144_30	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0382144_30	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0382144_30	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0382144_30	PF01183,TIGR02594,TIGR04303,COG3757,COG3942	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0382144_31	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0382144_33	K16628	102.1	1.5e-30	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0382144_33	phrog_819	129.1	3.60001e-40	tail protein	tail
UniRef90	UHGV-0382144_33	UniRef90_A0A3A6GQL7	1119.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0382144_33	1508644.SFBmNL_00815	100.0	4.85e-19	N/A	N/A
Pfam	UHGV-0382144_33	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0382144_33	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0382144_33	PF19789,PF16323,COG2033	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_34	phrog_18444	74.7	7.9e-22	N/A	unknown function
PHROG	UHGV-0382144_35	phrog_6616	547.3	0	tail protein	tail
UniRef90	UHGV-0382144_35	UniRef90_A0A352BLY8	523.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0382144_35	33035.JPJF01000043_gene1002	260.0	0	N/A	N/A
structural_annotation	UHGV-0382144_35	PF05113,PF18432,NF033848,NF011735,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_36	phrog_1194	84.8	7.2e-25	N/A	unknown function
structural_annotation	UHGV-0382144_36	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_37	phrog_1535	480.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0382144_37	UniRef90_A0A173R880	837.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0382144_37	476272.RUMHYD_01785	835.0	0	phage tail tape measure protein	N/A
COG	UHGV-0382144_37	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0382144_37	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_38	phrog_706	134.6	6.50001e-40	N/A	unknown function
UniRef90	UHGV-0382144_38	UniRef90_UPI001BAD00AD	207.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0382144_38	411459.RUMOBE_01383	344.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0382144_38	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0382144_38	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_39	phrog_11299	66.7	3.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0382144_39	411459.RUMOBE_01382	58.9	0.00000000418	N/A	N/A
structural_annotation	UHGV-0382144_39	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_40	phrog_3099	132.6	2.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0382144_40	411902.CLOBOL_00129	171.0	0	N/A	N/A
structural_annotation	UHGV-0382144_40	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_41	phrog_3266	92.4	3.6e-27	tail completion	connector
eggNOG-mapper	UHGV-0382144_41	476272.RUMHYD_01781	150.0	4.90454e-44	N/A	N/A
structural_annotation	UHGV-0382144_41	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_42	phrog_556	66.1	3.4e-19	minor head protein	head and packaging
UniRef90	UHGV-0382144_42	UniRef90_UPI000E4989EB	297.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0382144_42	476272.RUMHYD_01780	160.0	0	N/A	N/A
Pfam	UHGV-0382144_42	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0382144_42	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_43	phrog_3366	97.7	1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0382144_43	476272.RUMHYD_01779	156.0	0	N/A	N/A
structural_annotation	UHGV-0382144_43	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_44	phrog_1129	76.1	2.9e-22	holin	lysis
UniRef90	UHGV-0382144_44	UniRef90_A0A395X7B2	172.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0382144_44	411461.DORFOR_00721	113.0	1.02e-31	N/A	N/A
Pfam	UHGV-0382144_44	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0382144_44	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_46	phrog_541	100.6	6.6e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-0382144_46	476272.RUMHYD_01778	113.0	1.38e-29	N/A	N/A
PHROG	UHGV-0382144_47	phrog_544	167.4	0	major head protein	head and packaging
UniRef90	UHGV-0382144_47	UniRef90_A0A395X7A1	711.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0382144_47	1232453.BAIF02000011_gene3359	383.0	0	N/A	N/A
Pfam	UHGV-0382144_47	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0382144_47	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_48	phrog_194	64.3	2.4e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0382144_48	UniRef90_UPI001D14C9C8	192.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0382144_48	476272.RUMHYD_01775	197.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0382144_48	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0382144_49	phrog_28802	224.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0382144_49	476272.RUMHYD_01772	200.0	0	N/A	N/A
PHROG	UHGV-0382144_50	phrog_20016	205.6	0	N/A	unknown function
UniRef90	UHGV-0382144_50	UniRef90_A0A285PT46	166.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0382144_50	397290.C810_05214	186.0	0	N/A	N/A
structural_annotation	UHGV-0382144_50	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_51	phrog_16490	189.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0382144_51	397290.C810_01328	167.0	0	N/A	N/A
PHROG	UHGV-0382144_52	phrog_22984	95.2	3.9e-28	N/A	unknown function
PHROG	UHGV-0382144_53	phrog_21718	134.0	6.50001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0382144_53	476272.RUMHYD_01768	131.0	3.97e-37	N/A	N/A
UniRef90	UHGV-0382144_54	UniRef90_A0A395X7A4	181.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0382144_54	476272.RUMHYD_01766	122.0	5.31e-35	N/A	N/A
PHROG	UHGV-0382144_55	phrog_3754	114.0	9.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0382144_55	476272.RUMHYD_01764	182.0	0	N/A	N/A
PHROG	UHGV-0382144_56	phrog_581	273.8	0	minor head protein	head and packaging
UniRef90	UHGV-0382144_56	UniRef90_A0A395X791	762.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0382144_56	33035.JPJF01000106_gene3134	422.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0382144_56	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0382144_56	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0382144_56	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0382144_58	phrog_533	286.8	0	portal protein	head and packaging
UniRef90	UHGV-0382144_58	UniRef90_A0A1C6CDM8	714.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0382144_58	33035.JPJF01000106_gene3135	541.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0382144_58	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0382144_59	K06909	383.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0382144_59	phrog_3717	146.8	9.94922e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0382144_59	UniRef90_A0A6L8SYJ6	1032.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0382144_59	33035.JPJF01000106_gene3136	531.0	0	Terminase small subunit	N/A
Pfam	UHGV-0382144_59	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0382144_59	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0382144_59	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0382144_59	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0382144_59	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0382144_62	PF09038	N/A	N/A	N/A	N/A