UHGV-0383488 (vOTU-152432)

Viral Genome: UHGV-0383488

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0383488
vOTU ID	vOTU-152432
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_4520
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.38 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9806
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.93
Jumbo phage	No

Genome content
Genome length (bp)	25,869
GC content	46.70%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	90%
Average CDS length (bps)	666.60
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0383488_2	K07474	156.0	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0383488_2	phrog_51	150.3	8.40779e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0383488_2	UniRef90_UPI00189AE36E	316.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0383488_2	742740.HMPREF9474_03499	241.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0383488_2	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0383488_2	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0383488_2	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0383488_3	K06909	82.9	5e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0383488_3	phrog_2	67.8	2.2e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0383488_3	UniRef90_UPI00192D4B43	850.0	0	terminase	N/A
eggNOG-mapper	UHGV-0383488_3	742740.HMPREF9474_03500	837.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0383488_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0383488_3	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_5	phrog_28292	137.4	2.50006e-41	N/A	unknown function
UniRef90	UHGV-0383488_5	UniRef90_A0A8B3BZ84	102.0	6.77e-27	3-hydroxyacyl-CoA dehydrogenase	N/A
eggNOG-mapper	UHGV-0383488_5	500632.CLONEX_01438	85.1	5.78e-21	N/A	N/A
PHROG	UHGV-0383488_6	phrog_533	290.0	0	portal protein	head and packaging
UniRef90	UHGV-0383488_6	UniRef90_A0A1C7G7K7	916.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0383488_6	742740.HMPREF9474_03501	867.0	0	N/A	N/A
structural_annotation	UHGV-0383488_6	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_7	phrog_581	243.5	0	minor head protein	head and packaging
UniRef90	UHGV-0383488_7	UniRef90_UPI00138AC1F0	931.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0383488_7	742740.HMPREF9474_03503	543.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0383488_7	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0383488_7	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0383488_7	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0383488_7	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_8	phrog_2303	145.5	3.69943e-43	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0383488_8	742740.HMPREF9474_03504	283.0	0	N/A	N/A
PHROG	UHGV-0383488_9	phrog_422	351.6	0	major head protein	head and packaging
UniRef90	UHGV-0383488_9	UniRef90_E7GRG0	595.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0383488_9	742740.HMPREF9474_03505	595.0	0	N/A	N/A
structural_annotation	UHGV-0383488_9	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_10	phrog_1378	71.7	3.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0383488_10	742740.HMPREF9474_03506	179.0	0	N/A	N/A
PHROG	UHGV-0383488_11	phrog_541	93.1	2.3e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0383488_11	742740.HMPREF9474_03507	248.0	0	N/A	N/A
PHROG	UHGV-0383488_12	phrog_8710	143.7	4.40008e-43	N/A	unknown function
eggNOG-mapper	UHGV-0383488_12	742740.HMPREF9474_03508	233.0	0	N/A	N/A
structural_annotation	UHGV-0383488_12	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_13	phrog_556	57.1	3e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0383488_13	742740.HMPREF9474_03509	211.0	0	N/A	N/A
PHROG	UHGV-0383488_14	phrog_2595	79.6	3.7e-23	head-tail connector protein	connector
UniRef90	UHGV-0383488_14	UniRef90_UPI001D068DAC	181.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0383488_14	742740.HMPREF9474_03510	266.0	0	N/A	N/A
Pfam	UHGV-0383488_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0383488_14	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_15	phrog_820	129.1	2e-38	major tail protein	tail
eggNOG-mapper	UHGV-0383488_15	742740.HMPREF9474_03511	311.0	0	domain, Protein	N/A
COG	UHGV-0383488_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0383488_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_16	phrog_8300	78.0	1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0383488_16	742740.HMPREF9474_03512	191.0	0	N/A	N/A
structural_annotation	UHGV-0383488_16	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_17	phrog_8355	96.9	7.7e-29	N/A	unknown function
UniRef90	UHGV-0383488_17	UniRef90_UPI001D07612A	177.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0383488_17	742740.HMPREF9474_03513	216.0	0	N/A	N/A
Pfam	UHGV-0383488_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0383488_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_18	phrog_1535	383.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0383488_18	UniRef90_A0A174WQ97	967.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0383488_18	742740.HMPREF9474_03514	1656.0	0	tape measure	N/A
COG	UHGV-0383488_18	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0383488_18	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_19	phrog_1194	69.7	3.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0383488_19	742740.HMPREF9474_03515	240.0	0	N/A	N/A
structural_annotation	UHGV-0383488_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_20	phrog_13879	649.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0383488_20	742740.HMPREF9474_03516	1157.0	0	N/A	N/A
structural_annotation	UHGV-0383488_20	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_21	phrog_18725	117.8	7.9e-35	N/A	unknown function
eggNOG-mapper	UHGV-0383488_21	1298920.KI911353_gene4838	234.0	0	N/A	N/A
eggNOG-mapper	UHGV-0383488_22	1298920.KI911353_gene4837	215.0	0	N/A	N/A
PHROG	UHGV-0383488_23	phrog_13589	64.2	8.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0383488_23	610130.Closa_0859	99.8	8.85e-21	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0383488_23	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0383488_23	PF21253,NF038128	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0383488_25	931626.Awo_c34950	48.9	0.00000031	N/A	N/A
PHROG	UHGV-0383488_26	phrog_4105	79.8	2.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-0383488_26	610130.Closa_0762	164.0	0	N/A	N/A
PHROG	UHGV-0383488_27	phrog_1129	76.1	2.8e-22	holin	lysis
UniRef90	UHGV-0383488_27	UniRef90_U2D342	160.0	0	Holin family protein	N/A
eggNOG-mapper	UHGV-0383488_27	33035.JPJF01000043_gene995	134.0	5.35e-40	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0383488_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0383488_27	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_29	phrog_1129	71.2	9.8e-21	holin	lysis
UniRef90	UHGV-0383488_29	UniRef90_A0A2N0KEV2	161.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0383488_29	742740.HMPREF9474_03522	155.0	0	N/A	N/A
Pfam	UHGV-0383488_29	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0383488_29	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0383488_30	K11062	171.4	0	entD; probable enterotoxin D	N/A
PHROG	UHGV-0383488_30	phrog_1794	169.7	0	amidase	lysis
UniRef90	UHGV-0383488_30	UniRef90_UPI001897A03C	529.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0383488_30	742740.HMPREF9474_03524	499.0	0	Ami_2	N/A
Pfam	UHGV-0383488_30	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0383488_30	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0383488_30	PF01510,PF19127,MF_04111,NF008758,TIGR04035,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0383488_31	phrog_2657	215.4	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0383488_31	UniRef90_UPI0002D18C60	360.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0383488_31	742740.HMPREF9474_03525	435.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0383488_31	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0383488_31	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0383488_31	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0383488_31	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0383488_33	UniRef90_UPI00156F2295	153.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0383488_33	1120998.AUFC01000012_gene488	76.3	2.38e-17	sequence-specific DNA binding	N/A
Pfam	UHGV-0383488_33	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0383488_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0383488_33	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0383488_34	K14059	183.2	0	int; integrase	N/A
PHROG	UHGV-0383488_34	phrog_1	163.2	0	integrase	integration and excision
UniRef90	UHGV-0383488_34	UniRef90_A0A1C6K4B6	727.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0383488_34	742740.HMPREF9474_03478	721.0	0	DNA integration	N/A
Pfam	UHGV-0383488_34	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0383488_34	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0383488_34	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0383488_34	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0383488_35	UniRef90_A0A1C6K4A6	427.0	0	N/A	N/A
eggNOG-mapper	UHGV-0383488_35	742733.HMPREF9469_04977	90.1	1.71e-18	protein involved in cytokinesis, contains TGc (transglutaminase protease-like) domain	N/A
Pfam	UHGV-0383488_35	PF19085	N/A	N/A	Choline-binding repeat	Choline_bind_2
Pfam	UHGV-0383488_35	PF16729	N/A	N/A	N/A	DUF5067
COG	UHGV-0383488_35	COG5279	N/A	N/A	Cytokinesis protein 3, contains TGc (transglutaminase/protease-like) domain	N/A
structural_annotation	UHGV-0383488_35	PF11611,PF19127	N/A	N/A	N/A	N/A