UHGV-0384212 (vOTU-144865)

Viral Genome: UHGV-0384212

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0384212
vOTU ID	vOTU-144865
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_5492
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.31 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9796
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.16
Jumbo phage	No

Genome content
Genome length (bp)	21,022
GC content	48.73%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	92%
Average CDS length (bps)	689.79
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0384212_1	K17733	146.8	1.09301e-43	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0384212_1	phrog_2649	140.2	1.6e-41	endolysin	lysis
UniRef90	UHGV-0384212_1	UniRef90_R6ZH33	576.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0384212_1	397290.C810_01418	226.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0384212_1	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0384212_1	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0384212_1	PF02557,PF19127,MF_01924,NF007557,TIGR04035,COG2173	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_3	phrog_1129	69.0	4.7e-20	holin	lysis
UniRef90	UHGV-0384212_3	UniRef90_UPI0013F5D614	136.0	2.99001e-40	phage holin family protein	N/A
eggNOG-mapper	UHGV-0384212_3	742740.HMPREF9474_03522	108.0	9.02e-30	N/A	N/A
Pfam	UHGV-0384212_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0384212_3	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_4	phrog_937	41.2	0.000000000028	hemolysin	other
PHROG	UHGV-0384212_5	phrog_19111	81.6	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0384212_5	742740.HMPREF9474_03519	168.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0384212_5	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0384212_5	PF21253,NF038128	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384212_6	742740.HMPREF9474_03518	141.0	4.96999e-41	N/A	N/A
PHROG	UHGV-0384212_7	phrog_18725	111.6	6.1e-33	N/A	unknown function
eggNOG-mapper	UHGV-0384212_7	1298920.KI911353_gene4838	221.0	0	N/A	N/A
PHROG	UHGV-0384212_8	phrog_13879	390.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0384212_8	742740.HMPREF9474_03516	1006.0	0	N/A	N/A
structural_annotation	UHGV-0384212_8	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_9	phrog_1194	75.2	7.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0384212_9	742740.HMPREF9474_03515	174.0	0	N/A	N/A
structural_annotation	UHGV-0384212_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_10	phrog_1535	352.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0384212_10	UniRef90_A0A174SV65	741.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0384212_10	742740.HMPREF9474_03514	619.0	0	tape measure	N/A
COG	UHGV-0384212_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0384212_10	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_11	phrog_8355	110.1	5.3e-33	N/A	unknown function
UniRef90	UHGV-0384212_11	UniRef90_UPI000BA45828	116.0	6.77e-32	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0384212_11	33035.JPJF01000093_gene2244	108.0	1.27e-29	N/A	N/A
Pfam	UHGV-0384212_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0384212_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_12	phrog_8300	72.3	6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0384212_12	742740.HMPREF9474_03512	90.5	1.99e-22	N/A	N/A
structural_annotation	UHGV-0384212_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_13	phrog_820	114.6	5.1e-34	major tail protein	tail
eggNOG-mapper	UHGV-0384212_13	33035.JPJF01000093_gene2246	231.0	0	N/A	N/A
structural_annotation	UHGV-0384212_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_14	phrog_2595	89.5	3e-26	head-tail connector protein	connector
UniRef90	UHGV-0384212_14	UniRef90_UPI001D0627B3	151.0	8.40779e-45	minor capsid protein	N/A
eggNOG-mapper	UHGV-0384212_14	33035.JPJF01000093_gene2247	150.0	2.8026e-45	N/A	N/A
Pfam	UHGV-0384212_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0384212_14	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_15	phrog_556	56.1	5.4e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0384212_15	742740.HMPREF9474_03509	162.0	0	N/A	N/A
PHROG	UHGV-0384212_16	phrog_8710	141.6	1.80067e-42	N/A	unknown function
eggNOG-mapper	UHGV-0384212_16	33035.JPJF01000093_gene2249	145.0	6.30584e-44	N/A	N/A
structural_annotation	UHGV-0384212_16	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_17	phrog_541	74.8	9.9e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0384212_17	1298920.KI911353_gene4848	178.0	0	N/A	N/A
PHROG	UHGV-0384212_18	phrog_1378	78.6	5.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0384212_18	742740.HMPREF9474_03506	83.6	9.54e-20	N/A	N/A
PHROG	UHGV-0384212_19	phrog_422	348.9	0	major head protein	head and packaging
UniRef90	UHGV-0384212_19	UniRef90_R6Z318	597.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0384212_19	742740.HMPREF9474_03505	505.0	0	N/A	N/A
structural_annotation	UHGV-0384212_19	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_20	phrog_2303	143.0	1.99965e-42	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0384212_20	1304866.K413DRAFT_0806	203.0	0	N/A	N/A
UniRef90	UHGV-0384212_21	UniRef90_R6RQ19	166.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0384212_21	476272.RUMHYD_02879	77.4	5.29e-16	ORF6N domain	N/A
Pfam	UHGV-0384212_21	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0384212_21	PF13058,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_22	phrog_774	63.0	5.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0384212_22	397290.C810_05225	112.0	4.12e-31	N/A	N/A
KOfam	UHGV-0384212_24	K11044	40.0	0.0000000000038	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-0384212_24	phrog_581	258.7	0	minor head protein	head and packaging
UniRef90	UHGV-0384212_24	UniRef90_A0A416Q253	767.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0384212_24	33035.JPJF01000093_gene2255	692.0	0	N/A	N/A
Pfam	UHGV-0384212_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0384212_24	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0384212_24	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0384212_24	PF06152,PF03496,MF_04139,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-0384212_25	phrog_533	286.0	0	portal protein	head and packaging
UniRef90	UHGV-0384212_25	UniRef90_R7AJB6	967.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0384212_25	742740.HMPREF9474_03501	774.0	0	N/A	N/A
structural_annotation	UHGV-0384212_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0384212_26	K06909	93.6	2.4e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0384212_26	phrog_2	85.5	8.8e-25	terminase large subunit	head and packaging
UniRef90	UHGV-0384212_26	UniRef90_UPI000B896FAD	785.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0384212_26	1282664.H354_06621	666.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0384212_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0384212_26	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0384212_27	K07474	155.4	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0384212_27	phrog_51	147.6	5.60519e-44	terminase small subunit	head and packaging
UniRef90	UHGV-0384212_27	UniRef90_R6Z908	302.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0384212_27	1321778.HMPREF1982_02686	207.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0384212_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0384212_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0384212_27	PF03592,COG3728	N/A	N/A	N/A	N/A