UHGV-0384311 (vOTU-156037)

Viral Genome: UHGV-0384311

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0384311
vOTU ID	vOTU-156037
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_4496
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.07 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9828
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.59
Jumbo phage	No

Genome content
Genome length (bp)	26,026
GC content	48.50%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	40
CDS density	95%
Average CDS length (bps)	621.30
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0384311_1	phrog_443	52.6	0.000000000000012	holin	lysis
UniRef90	UHGV-0384311_1	UniRef90_UPI000BA354B0	95.1	2.44e-24	holin	N/A
eggNOG-mapper	UHGV-0384311_1	742733.HMPREF9469_01797	99.4	9.31e-27	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0384311_1	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0384311_1	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_2	phrog_937	40.9	0.000000000034	hemolysin	other
UniRef90	UHGV-0384311_2	UniRef90_R5GGW2	104.0	6.04e-27	Phosphoglucosamine mutase	N/A
eggNOG-mapper	UHGV-0384311_2	1235800.C819_01426	62.8	0.0000000000201	N/A	N/A
eggNOG-mapper	UHGV-0384311_4	931276.Cspa_c27110	52.8	0.0000000192	N/A	N/A
PHROG	UHGV-0384311_5	phrog_19280	51.7	0.0000000000000098	N/A	unknown function
UniRef90	UHGV-0384311_5	UniRef90_A0A174NC72	624.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0384311_5	742733.HMPREF9469_00973	242.0	0	N/A	N/A
Pfam	UHGV-0384311_5	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0384311_5	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_8	phrog_30220	44.0	0.0000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0384311_8	610130.Closa_0859	63.5	0.0000000277	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0384311_8	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0384311_8	PF20620,NF038128	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_9	phrog_18725	73.4	2.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0384311_9	742740.HMPREF9474_03517	123.0	1.63e-34	N/A	N/A
PHROG	UHGV-0384311_10	phrog_13879	341.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0384311_10	742740.HMPREF9474_03516	593.0	0	N/A	N/A
structural_annotation	UHGV-0384311_10	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_11	phrog_1194	67.1	2.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0384311_11	742740.HMPREF9474_03515	201.0	0	N/A	N/A
structural_annotation	UHGV-0384311_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_12	phrog_58	109.0	4.4e-32	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0384311_12	1298920.KI911353_gene4841	265.0	0	SLT domain	N/A
Pfam	UHGV-0384311_12	PF05017	N/A	N/A	TMP repeat	TMP
COG	UHGV-0384311_12	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0384311_13	phrog_1535	322.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0384311_13	UniRef90_A0A174WQ97	1127.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0384311_13	742740.HMPREF9474_03514	748.0	0	tape measure	N/A
COG	UHGV-0384311_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0384311_14	phrog_8355	96.4	1.1e-28	N/A	unknown function
UniRef90	UHGV-0384311_14	UniRef90_UPI001A9A799B	160.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0384311_14	742740.HMPREF9474_03513	161.0	0	N/A	N/A
Pfam	UHGV-0384311_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0384311_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_15	phrog_8300	99.1	2.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0384311_15	742740.HMPREF9474_03512	113.0	2.21e-31	N/A	N/A
structural_annotation	UHGV-0384311_15	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_16	phrog_820	135.4	2.29999e-40	major tail protein	tail
eggNOG-mapper	UHGV-0384311_16	483218.BACPEC_01149	224.0	0	domain, Protein	N/A
COG	UHGV-0384311_16	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0384311_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_17	phrog_2595	80.2	2.2e-23	head-tail connector protein	connector
UniRef90	UHGV-0384311_17	UniRef90_UPI001D068DAC	181.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0384311_17	742740.HMPREF9474_03510	237.0	0	N/A	N/A
Pfam	UHGV-0384311_17	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0384311_17	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_18	phrog_556	54.3	0.0000000000000022	minor head protein	head and packaging
eggNOG-mapper	UHGV-0384311_18	742740.HMPREF9474_03509	192.0	0	N/A	N/A
PHROG	UHGV-0384311_19	phrog_8710	148.5	1.26117e-44	N/A	unknown function
eggNOG-mapper	UHGV-0384311_19	742740.HMPREF9474_03508	211.0	0	N/A	N/A
structural_annotation	UHGV-0384311_19	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_20	phrog_541	84.2	1.3e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0384311_20	1304866.K413DRAFT_0783	195.0	0	N/A	N/A
PHROG	UHGV-0384311_21	phrog_1378	69.3	2.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0384311_21	742740.HMPREF9474_03506	132.0	4.19e-39	N/A	N/A
PHROG	UHGV-0384311_22	phrog_422	343.4	0	major head protein	head and packaging
UniRef90	UHGV-0384311_22	UniRef90_E7GRG0	557.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0384311_22	742740.HMPREF9474_03505	557.0	0	N/A	N/A
structural_annotation	UHGV-0384311_22	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_23	phrog_2303	156.5	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0384311_23	742740.HMPREF9474_03504	246.0	0	N/A	N/A
PHROG	UHGV-0384311_24	phrog_3675	104.8	3.8e-31	N/A	unknown function
UniRef90	UHGV-0384311_24	UniRef90_A0A3E2UCU7	202.0	0	Dihydrolipoyl dehydrogenase	N/A
eggNOG-mapper	UHGV-0384311_24	585501.HMPREF6123_0838	136.0	1.81e-40	YjcQ protein	N/A
Pfam	UHGV-0384311_24	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0384311_24	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_26	phrog_581	256.1	0	minor head protein	head and packaging
UniRef90	UHGV-0384311_26	UniRef90_UPI001106A636	619.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0384311_26	742740.HMPREF9474_03503	524.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0384311_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0384311_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0384311_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_27	phrog_25639	131.2	1.7e-39	N/A	unknown function
eggNOG-mapper	UHGV-0384311_27	742740.HMPREF9474_03502	114.0	2.48e-32	N/A	N/A
PHROG	UHGV-0384311_28	phrog_533	282.8	0	portal protein	head and packaging
UniRef90	UHGV-0384311_28	UniRef90_A0A174WUZ7	1019.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0384311_28	742740.HMPREF9474_03501	847.0	0	N/A	N/A
structural_annotation	UHGV-0384311_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0384311_29	K06909	74.7	1.4e-21	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0384311_29	phrog_2	52.2	0.000000000000013	terminase large subunit	head and packaging
UniRef90	UHGV-0384311_29	UniRef90_A0A174WYX0	845.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0384311_29	1298920.KI911353_gene4856	773.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0384311_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0384311_29	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_30	phrog_59	136.7	8.69996e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0384311_30	UniRef90_UPI001E36D85A	155.0	2.24208e-44	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-0384311_30	1423814.HMPREF0549_1779	142.0	1.02e-39	NUMOD4 motif	N/A
PADLOC	UHGV-0384311_30	HEase_00016	103.8	1.7e-30	homing endonuclease	RM
Pfam	UHGV-0384311_30	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0384311_30	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0384311_30	PF07453,TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0384311_31	K07474	161.2	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0384311_31	phrog_51	153.8	1.4013e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0384311_31	UniRef90_A0A374P9L2	297.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0384311_31	742740.HMPREF9474_03499	259.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0384311_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0384311_31	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0384311_31	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0384311_32	phrog_36	42.6	0.0000000000096	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0384311_32	1304866.K413DRAFT_0819	155.0	0	N/A	N/A
UniRef90	UHGV-0384311_33	UniRef90_R6ZHB9	101.0	3.84e-25	Putative bacteriocin ABC transporter	N/A
eggNOG-mapper	UHGV-0384311_33	742733.HMPREF9469_02894	125.0	1.97e-35	N/A	N/A
structural_annotation	UHGV-0384311_33	PF19962,COG1579	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0384311_34	PF14192	N/A	N/A	N/A	N/A
UniRef90	UHGV-0384311_35	UniRef90_UPI00164D7607	117.0	2.89e-32	N/A	N/A
UniRef90	UHGV-0384311_36	UniRef90_A0A413WS40	107.0	1.73e-29	Ribbon-helix-helix protein, CopG family	N/A
structural_annotation	UHGV-0384311_36	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0384311_39	PF11132,NF007981	N/A	N/A	N/A	N/A
UniRef90	UHGV-0384311_40	UniRef90_A0A5D4MDK0	88.6	2.61e-20	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0384311_40	97139.C824_00748	97.1	1.74e-24	N/A	N/A