UHGV-0384873 (vOTU-161338)

Viral Genome: UHGV-0384873

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0384873
vOTU ID	vOTU-161338
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_5143
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.35 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9781
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.81
Jumbo phage	No

Genome content
Genome length (bp)	22,571
GC content	48.32%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	94%
Average CDS length (bps)	704.50
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0384873_1	K22300	55.5	0.0000000000000011	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0384873_1	phrog_8	76.1	5.7e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0384873_1	UniRef90_A0A174PIE4	146.0	1.03e-39	Phage repressor	N/A
eggNOG-mapper	UHGV-0384873_1	658655.HMPREF0988_02594	76.3	0.0000000000000423	Helix-turn-helix	N/A
Pfam	UHGV-0384873_1	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0384873_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0384873_1	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_2	phrog_87	65.1	8.8e-19	metallo-protease	other
UniRef90	UHGV-0384873_2	UniRef90_R5FIM6	306.0	0	Pathogenicity island protein	N/A
eggNOG-mapper	UHGV-0384873_2	658655.HMPREF0988_02595	167.0	0	Zn peptidase	N/A
Pfam	UHGV-0384873_2	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0384873_2	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0384873_2	PF06114,COG2856	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384873_3	1262449.CP6013_2082	120.0	3.91e-33	N/A	N/A
structural_annotation	UHGV-0384873_3	PF11631,TIGR03066	N/A	N/A	N/A	N/A
KOfam	UHGV-0384873_4	K14059	164.9	0	int; integrase	N/A
PHROG	UHGV-0384873_4	phrog_1	151.0	8.40779e-45	integrase	integration and excision
UniRef90	UHGV-0384873_4	UniRef90_A0A0F0C3P8	686.0	0	Phage integrase family protein	N/A
eggNOG-mapper	UHGV-0384873_4	1304866.K413DRAFT_3002	311.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0384873_4	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0384873_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0384873_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0384873_4	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384873_5	411460.RUMTOR_00440	55.1	0.00000000394	N/A	N/A
structural_annotation	UHGV-0384873_5	PF17516,MF_01354,NF037951,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_6	phrog_2657	223.8	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0384873_6	UniRef90_UPI0002D18C60	424.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0384873_6	742740.HMPREF9474_03525	355.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0384873_6	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0384873_6	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0384873_6	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0384873_6	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0384873_7	K00689	41.9	0.0000000000032	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-0384873_7	phrog_7854	74.1	2.2e-21	endolysin	lysis
UniRef90	UHGV-0384873_7	UniRef90_A0A0F0CDM5	558.0	0	Autolysin	N/A
eggNOG-mapper	UHGV-0384873_7	1304866.K413DRAFT_1245	424.0	0	Putative cell wall binding repeat	N/A
Pfam	UHGV-0384873_7	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0384873_7	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0384873_7	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-0384873_7	PF19127,PF05382,MF_00727,TIGR04035,NF033742,COG5263	N/A	N/A	N/A	N/A
UniRef90	UHGV-0384873_8	UniRef90_A0A174NC72	239.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0384873_8	742733.HMPREF9469_00973	274.0	0	N/A	N/A
structural_annotation	UHGV-0384873_8	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_9	phrog_19695	69.3	8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0384873_9	411462.DORLON_00772	87.4	1.09e-20	N/A	N/A
structural_annotation	UHGV-0384873_9	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_11	phrog_263	99.1	2e-29	holin	lysis
UniRef90	UHGV-0384873_11	UniRef90_A0A4R2PAT5	102.0	8.52e-27	SPP1 family holin	N/A
eggNOG-mapper	UHGV-0384873_11	1121344.JHZO01000003_gene952	78.2	6.4e-18	SPP1 phage holin	N/A
Pfam	UHGV-0384873_11	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0384873_11	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0384873_11	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_12	phrog_937	73.9	2.1e-21	hemolysin	other
eggNOG-mapper	UHGV-0384873_12	411459.RUMOBE_01081	60.1	0.000000000384	N/A	N/A
structural_annotation	UHGV-0384873_13	PF21253,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_14	phrog_19111	50.5	0.000000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0384873_14	411902.CLOBOL_00121	134.0	6.86e-36	nuclear chromosome segregation	N/A
COG	UHGV-0384873_14	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0384873_14	PF17994,MF_00813,NF038128,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384873_15	411902.CLOBOL_00122	143.0	9.10984e-42	N/A	N/A
PHROG	UHGV-0384873_16	phrog_18725	52.0	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0384873_16	411902.CLOBOL_00123	226.0	0	N/A	N/A
PHROG	UHGV-0384873_17	phrog_13879	212.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0384873_17	411902.CLOBOL_00124	1196.0	0	N/A	N/A
structural_annotation	UHGV-0384873_17	PF14594,PF21114,MF_00813,NF033848,TIGR02961,COG4379,COG4266	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_18	phrog_1194	58.0	1.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0384873_18	411902.CLOBOL_00125	249.0	0	N/A	N/A
structural_annotation	UHGV-0384873_18	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_19	phrog_1535	251.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0384873_19	UniRef90_A0A173WM72	164.0	2.18e-37	Phage-related protein	N/A
eggNOG-mapper	UHGV-0384873_19	411902.CLOBOL_00126	1433.0	0	N/A	N/A
COG	UHGV-0384873_19	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0384873_20	phrog_706	136.6	1.50001e-40	N/A	unknown function
UniRef90	UHGV-0384873_20	UniRef90_A0A0F0CE18	360.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0384873_20	411902.CLOBOL_00127	359.0	0	N/A	N/A
Pfam	UHGV-0384873_20	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0384873_20	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_21	phrog_11299	84.2	1.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0384873_21	411902.CLOBOL_00128	244.0	0	N/A	N/A
structural_annotation	UHGV-0384873_21	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_22	phrog_3099	168.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0384873_22	411902.CLOBOL_00129	295.0	0	N/A	N/A
structural_annotation	UHGV-0384873_22	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_23	phrog_3266	110.1	1.2e-32	tail completion	connector
eggNOG-mapper	UHGV-0384873_23	411902.CLOBOL_00130	267.0	0	N/A	N/A
structural_annotation	UHGV-0384873_23	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_24	phrog_556	90.8	5.9e-27	minor head protein	head and packaging
UniRef90	UHGV-0384873_24	UniRef90_UPI00189CE0C6	242.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0384873_24	411902.CLOBOL_00131	253.0	0	Minor capsid protein	N/A
Pfam	UHGV-0384873_24	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0384873_24	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_25	phrog_3366	70.9	1.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0384873_25	411902.CLOBOL_00132	217.0	0	N/A	N/A
Pfam	UHGV-0384873_25	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0384873_25	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_26	phrog_541	93.0	2.4e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0384873_26	411902.CLOBOL_00133	194.0	0	N/A	N/A
PHROG	UHGV-0384873_27	phrog_247	275.9	0	major head protein	head and packaging
UniRef90	UHGV-0384873_27	UniRef90_D3ANA7	677.0	0	Putative coat protein	N/A
eggNOG-mapper	UHGV-0384873_27	1304866.K413DRAFT_3038	561.0	0	N/A	N/A
structural_annotation	UHGV-0384873_27	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0384873_28	phrog_194	110.1	2.3e-32	head scaffolding protein	head and packaging
UniRef90	UHGV-0384873_28	UniRef90_A0A0F0CJ77	285.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0384873_28	1304866.K413DRAFT_3037	147.0	3.96988e-42	Phage minor structural protein GP20	N/A
Pfam	UHGV-0384873_28	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0384873_28	PF06810	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384873_30	411902.CLOBOL_00137	263.0	0	N/A	N/A
COG	UHGV-0384873_30	COG2369	N/A	N/A	N/A	N/A