UHGV-0384926 (vOTU-151551)

Viral Genome: UHGV-0384926

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0384926
vOTU ID	vOTU-151551
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_2557
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	85.15 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9672
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.97
Jumbo phage	No

Genome content
Genome length (bp)	38,642
GC content	32.81%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	87%
Average CDS length (bps)	625.39
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 85.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0384926_1	phrog_5702	48.5	0.00000000000011	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0384926_1	UniRef90_UPI001D05BCE1	125.0	1.28e-36	VRR-NUC domain-containing protein	N/A
PHROG	UHGV-0384926_2	phrog_22292	52.7	0.0000000000000064	N/A	unknown function
eggNOG-mapper	UHGV-0384926_2	1232446.BAIE02000041_gene2433	142.0	2.36007e-41	N/A	N/A
PHROG	UHGV-0384926_3	phrog_355	55.5	8e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0384926_3	UniRef90_A0A3E3AFU6	233.0	0	N/A	N/A
eggNOG-mapper	UHGV-0384926_3	97138.C820_00250	125.0	6.49e-36	N/A	N/A
Pfam	UHGV-0384926_3	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0384926_3	PF14359,COG3613	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384926_5	1123263.AUKY01000072_gene2097	50.1	0.00000182	N/A	N/A
eggNOG-mapper	UHGV-0384926_7	1235799.C818_00262	47.8	0.00000182	N/A	N/A
structural_annotation	UHGV-0384926_10	PF20549,NF037951,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_11	phrog_173	113.0	2.5e-33	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0384926_11	UniRef90_A0A3E3AEA0	333.0	0	dUTPase	N/A
eggNOG-mapper	UHGV-0384926_11	1352230.S6AVW3_9CAUD	101.0	4.76e-25	dCTP diphosphatase activity	N/A
Pfam	UHGV-0384926_11	PF08761	N/A	N/A	dUTPase	dUTPase_2
structural_annotation	UHGV-0384926_11	PF08761,COG4508	N/A	N/A	N/A	N/A
KOfam	UHGV-0384926_12	K02316	102.5	5.2e-30	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0384926_12	phrog_864	273.0	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0384926_12	UniRef90_UPI001D08D333	603.0	0	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-0384926_12	469596.HMPREF9488_01547	286.0	0	D5 N terminal like	N/A
Pfam	UHGV-0384926_12	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-0384926_12	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0384926_12	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-0384926_12	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0384926_12	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0384926_12	PF04735,MF_00974,MF_04000,NF005477,COG3378,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_13	phrog_606	40.2	0.000000000023	terminase small subunit	head and packaging
UniRef90	UHGV-0384926_13	UniRef90_A0A318EMC2	106.0	4.7e-25	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-0384926_13	1235793.C809_00539	62.4	0.00000000247	N/A	N/A
Pfam	UHGV-0384926_13	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
UniRef90	UHGV-0384926_16	UniRef90_A0A3E3AET2	152.0	0	XRE family transcriptional regulator	N/A
Pfam	UHGV-0384926_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0384926_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0384926_16	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0384926_17	K14060	114.0	1.6e-33	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0384926_17	phrog_125	158.0	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0384926_17	UniRef90_A0A3E3AEZ4	353.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0384926_17	658088.HMPREF0987_00525	170.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0384926_17	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0384926_17	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0384926_17	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0384926_19	K18830	57.8	1.4e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0384926_19	phrog_8	70.4	1.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0384926_19	UniRef90_UPI000E48EC62	355.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0384926_19	1504823.CCMM01000008_gene1055	117.0	5.01e-31	sequence-specific DNA binding	N/A
Pfam	UHGV-0384926_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0384926_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0384926_19	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_20	phrog_37719	41.3	0.000000000021	N/A	unknown function
structural_annotation	UHGV-0384926_20	PF07878,NF010256,COG4691	N/A	N/A	N/A	N/A
KOfam	UHGV-0384926_21	K07741	60.2	6.2e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-0384926_21	phrog_373	100.7	1.6e-29	anti-repressor	transcription regulation
UniRef90	UHGV-0384926_21	UniRef90_UPI000E4E5BF3	435.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0384926_21	552396.HMPREF0863_00756	204.0	0	P22_AR N-terminal domain	N/A
Pfam	UHGV-0384926_21	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0384926_21	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0384926_21	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0384926_21	PF10552,PF08346,NF008573,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_23	phrog_1233	73.1	4.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0384926_23	357809.Cphy_2967	68.6	0.000000000000137	N/A	N/A
structural_annotation	UHGV-0384926_23	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_24	phrog_38	169.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0384926_24	UniRef90_A0A318EQM2	468.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0384926_24	1123263.AUKY01000015_gene1608	481.0	0	chromosome segregation	N/A
COG	UHGV-0384926_24	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0384926_24	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_25	phrog_64	225.9	0	portal protein	head and packaging
UniRef90	UHGV-0384926_25	UniRef90_A0A3E3AE79	919.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0384926_25	1121866.AUGK01000003_gene1429	270.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0384926_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0384926_25	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_27	phrog_544	71.3	5e-21	major head protein	head and packaging
eggNOG-mapper	UHGV-0384926_27	428127.EUBDOL_01555	325.0	0	N/A	N/A
structural_annotation	UHGV-0384926_27	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0384926_28	UniRef90_A0A374HKI7	75.5	0.00000000000000133	DNA-packaging protein	N/A
structural_annotation	UHGV-0384926_28	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384926_29	1121866.AUGK01000003_gene1432	50.1	0.00000557	N/A	N/A
UniRef90	UHGV-0384926_30	UniRef90_UPI001BBD4500	103.0	5.85e-25	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0384926_30	397290.C810_01411	106.0	1.17e-26	N/A	N/A
structural_annotation	UHGV-0384926_30	PF17395,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384926_31	1121333.JMLH01000047_gene1014	67.4	0.000000000002	N/A	N/A
structural_annotation	UHGV-0384926_31	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_32	phrog_158	50.1	0.000000000000046	major tail protein	tail
eggNOG-mapper	UHGV-0384926_32	1121333.JMLH01000047_gene1013	245.0	0	N/A	N/A
structural_annotation	UHGV-0384926_32	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0384926_33	UniRef90_A0A3E3AED0	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-0384926_33	1121333.JMLH01000047_gene1012	178.0	0	N/A	N/A
Pfam	UHGV-0384926_33	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0384926_33	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384926_34	1121333.JMLH01000047_gene1011	137.0	4.58e-40	N/A	N/A
PHROG	UHGV-0384926_35	phrog_1535	252.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0384926_35	UniRef90_A8RD17	262.0	0	Cation diffusion facilitator family transporter	N/A
eggNOG-mapper	UHGV-0384926_35	469596.HMPREF9488_01316	377.0	0	N/A	N/A
PHROG	UHGV-0384926_36	phrog_1194	105.5	3.2e-31	N/A	unknown function
UniRef90	UHGV-0384926_36	UniRef90_A0A4U9RD70	101.0	2.39e-25	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-0384926_36	1211844.CBLM010000023_gene979	129.0	3.94e-37	N/A	N/A
Pfam	UHGV-0384926_36	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0384926_36	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_37	phrog_6616	97.0	3.9e-29	tail protein	tail
eggNOG-mapper	UHGV-0384926_37	1211844.CBLM010000023_gene978	484.0	0	cellulase activity	N/A
COG	UHGV-0384926_37	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-0384926_38	phrog_30133	101.8	2.4e-30	virion structural protein	head and packaging
UniRef90	UHGV-0384926_38	UniRef90_UPI00048904C4	270.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0384926_38	1504823.CCMM01000008_gene1029	284.0	0	N/A	N/A
structural_annotation	UHGV-0384926_38	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_39	phrog_819	196.6	0	tail protein	tail
UniRef90	UHGV-0384926_39	UniRef90_A0A3E3AC96	191.0	0	Collagen-like protein (Fragment)	N/A
eggNOG-mapper	UHGV-0384926_39	445974.CLORAM_02919	293.0	0	cellulase activity	N/A
COG	UHGV-0384926_39	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0384926_39	PF20986	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_40	phrog_372	255.3	0	tail protein	tail
UniRef90	UHGV-0384926_40	UniRef90_UPI000E5CC2C3	149.0	2.27e-35	N/A	N/A
eggNOG-mapper	UHGV-0384926_40	445974.CLORAM_02918	643.0	0	N/A	N/A
Pfam	UHGV-0384926_40	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0384926_40	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0384926_40	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
Pfam	UHGV-0384926_42	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-0384926_42	PF12961,MF_00771,NF002617,COG3215	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_43	phrog_10091	121.0	6.1e-36	holin	lysis
UniRef90	UHGV-0384926_43	UniRef90_A0A7U9CEZ0	165.0	0	Phage phi LC3 family holin	N/A
eggNOG-mapper	UHGV-0384926_43	428127.EUBDOL_01206	127.0	1.67e-37	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0384926_43	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0384926_43	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0384926_43	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0384926_43	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0384926_44	phrog_1863	84.1	7.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0384926_44	1232449.BAHV02000017_gene1511	69.7	0.00000000000000871	N/A	N/A
KOfam	UHGV-0384926_45	K21471	46.4	0.00000000000077	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-0384926_45	UniRef90_A0A416DTG4	306.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0384926_45	411902.CLOBOL_04837	171.0	0	Phage lysozyme	N/A
Pfam	UHGV-0384926_45	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0384926_45	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
UniRef90	UHGV-0384926_47	UniRef90_A0A7U9GPK7	121.0	4.1e-35	SH3b domain-containing protein	N/A
Pfam	UHGV-0384926_47	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0384926_47	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
KOfam	UHGV-0384926_48	K07491	103.6	3.4e-30	rayT; REP-associated tyrosine transposase	N/A
PHROG	UHGV-0384926_48	phrog_2577	167.1	0	transposase	integration and excision
UniRef90	UHGV-0384926_48	UniRef90_A0A7U9GPW0	322.0	0	Y1_Tnp domain-containing protein	N/A
eggNOG-mapper	UHGV-0384926_48	445974.CLORAM_00643	326.0	0	Transposase IS200 like	N/A
Pfam	UHGV-0384926_48	PF01797	N/A	N/A	Transposase IS200 like	Y1_Tnp
NCBIFam	UHGV-0384926_48	NF033573.1	N/A	N/A	IS200/IS605 family transposase	N/A
COG	UHGV-0384926_48	COG1943	N/A	N/A	REP element-mobilizing transposase RayT	N/A
structural_annotation	UHGV-0384926_48	PF01797,MF_00360,NF033573,COG1943	N/A	N/A	N/A	N/A
KOfam	UHGV-0384926_49	K05337	72.2	1.1e-20	fer; ferredoxin	N/A
UniRef90	UHGV-0384926_49	UniRef90_UPI001C3859D8	115.0	9.25e-33	ferredoxin	N/A
eggNOG-mapper	UHGV-0384926_49	1232446.BAIE02000003_gene851	117.0	2.68e-34	electron transfer activity	N/A
Pfam	UHGV-0384926_49	PF13370	N/A	N/A	4Fe-4S single cluster domain of Ferredoxin I	Fer4_13
COG	UHGV-0384926_49	COG1141	N/A	N/A	Ferredoxin	N/A
KOfam	UHGV-0384926_51	K14059	115.1	9.7e-34	int; integrase	N/A
PHROG	UHGV-0384926_51	phrog_1	129.9	2.2e-38	integrase	integration and excision
UniRef90	UHGV-0384926_51	UniRef90_UPI00067F1555	290.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0384926_51	1504823.CCMM01000008_gene1083	283.0	0	DNA integration	N/A
COG	UHGV-0384926_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0384926_51	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0384926_54	K01356	133.2	2.8e-39	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0384926_54	phrog_4	116.9	2.2e-34	transcriptional repressor	transcription regulation
UniRef90	UHGV-0384926_54	UniRef90_UPI001C38194E	426.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0384926_54	552396.HMPREF0863_02447	152.0	1.13505e-43	Represses a number of genes involved in the response to DNA damage (SOS response)	N/A
Pfam	UHGV-0384926_54	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0384926_54	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0384926_54	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0384926_54	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A