UHGV-0386581 (vOTU-137399)

Viral Genome: UHGV-0386581

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0386581
vOTU ID	vOTU-137399
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_5798
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.43 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.977
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.64
Jumbo phage	No

Genome content
Genome length (bp)	19,716
GC content	43.55%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	90%
Average CDS length (bps)	633.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0386581_1	phrog_1066	87.7	8.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0386581_1	1235793.C809_01916	170.0	0	N/A	N/A
structural_annotation	UHGV-0386581_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_2	phrog_9	400.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0386581_2	UniRef90_A0A174XWB0	1127.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0386581_2	1235793.C809_01917	887.0	0	Phage Terminase	N/A
Pfam	UHGV-0386581_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0386581_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0386581_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0386581_2	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_3	phrog_12	190.1	0	portal protein	head and packaging
UniRef90	UHGV-0386581_3	UniRef90_A0A174XIL2	803.0	0	Prophage lambdaBa04, portal protein	N/A
eggNOG-mapper	UHGV-0386581_3	1235793.C809_01918	510.0	0	Phage portal protein	N/A
Pfam	UHGV-0386581_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0386581_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0386581_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0386581_4	K01358	127.3	1.6e-37	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0386581_4	phrog_94	213.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0386581_4	UniRef90_A0A174XQS2	437.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0386581_4	1280689.AUJC01000011_gene1520	213.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0386581_4	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0386581_4	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0386581_4	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_5	phrog_10	176.5	0	major head protein	head and packaging
UniRef90	UHGV-0386581_5	UniRef90_A0A174XIH6	746.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0386581_5	1280689.AUJC01000011_gene1521	454.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0386581_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0386581_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0386581_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0386581_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_6	phrog_5223	72.1	5e-21	neck protein	connector
UniRef90	UHGV-0386581_6	UniRef90_A0A174XSK5	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0386581_6	411465.PEPMIC_00737	89.0	4.02e-22	N/A	N/A
structural_annotation	UHGV-0386581_6	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_7	phrog_1951	45.6	0.000000000000015	head-tail adaptor	connector
UniRef90	UHGV-0386581_7	UniRef90_A0A7G5NVT3	56.6	0.0000000338	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0386581_7	596315.HMPREF0634_0222	50.8	0.000000906	head-tail adaptor	N/A
COG	UHGV-0386581_7	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0386581_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_8	phrog_5	40.4	0.000000000065	tail completion or Neck1 protein	connector
structural_annotation	UHGV-0386581_8	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0386581_9	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_10	phrog_88	103.3	1.9e-30	major tail protein	tail
UniRef90	UHGV-0386581_10	UniRef90_A0A174XIJ5	390.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-0386581_10	742740.HMPREF9474_04299	230.0	0	N/A	N/A
NCBIFam	UHGV-0386581_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0386581_10	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_13	phrog_33680	136.9	1.2e-40	N/A	unknown function
UniRef90	UHGV-0386581_13	UniRef90_A0A174XMM8	1052.0	0	Tail tape measure protein TP901 core region	N/A
eggNOG-mapper	UHGV-0386581_13	742740.HMPREF9474_04296	467.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0386581_13	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0386581_13	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_14	phrog_37549	105.4	2.2e-31	virion structural protein	head and packaging
UniRef90	UHGV-0386581_14	UniRef90_UPI00189CF998	1070.0	0	DNRLRE domain-containing protein	N/A
eggNOG-mapper	UHGV-0386581_14	796940.HMPREF9628_00134	59.3	0.00000274	N/A	N/A
NCBIFam	UHGV-0386581_14	NF033679.1	N/A	N/A	DNRLRE domain-containing protein	N/A
structural_annotation	UHGV-0386581_14	PF06995,PF02010,MF_04116,TIGR02126,NF041431,COG3499,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_15	phrog_26795	236.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0386581_15	742740.HMPREF9474_04294	373.0	0	N/A	N/A
structural_annotation	UHGV-0386581_15	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_16	phrog_12764	50.6	0.000000000000024	N/A	unknown function
structural_annotation	UHGV-0386581_16	PF01176,MF_00085,TIGR00523,COG0361	N/A	N/A	N/A	N/A
KOfam	UHGV-0386581_17	K07296	62.2	5.1e-18	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-0386581_17	phrog_6320	76.0	3.1e-22	tail fiber protein	tail
UniRef90	UHGV-0386581_17	UniRef90_A0A174XQW7	443.0	0	Collagen triple helix repeat-containing protein	N/A
Pfam	UHGV-0386581_17	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0386581_17	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0386581_18	K24213	79.1	4.1e-23	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0386581_18	phrog_5073	108.8	5.2e-32	tail fiber protein	tail
UniRef90	UHGV-0386581_18	UniRef90_UPI0012D87B5B	102.0	9.92e-23	collagen-like protein	N/A
Pfam	UHGV-0386581_18	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
eggNOG-mapper	UHGV-0386581_19	742740.HMPREF9474_04291	140.0	3.69004e-41	N/A	N/A
structural_annotation	UHGV-0386581_20	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_21	phrog_1863	80.0	6.2e-24	N/A	unknown function
UniRef90	UHGV-0386581_21	UniRef90_UPI001F223E8B	119.0	1.72e-33	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0386581_21	1226322.HMPREF1545_04027	79.0	1.97e-18	N/A	N/A
PHROG	UHGV-0386581_22	phrog_1129	68.8	5.4e-20	holin	lysis
UniRef90	UHGV-0386581_22	UniRef90_A0A416MDZ9	139.0	3.45e-41	Enolase	N/A
eggNOG-mapper	UHGV-0386581_22	742740.HMPREF9474_03522	134.0	3.58e-40	N/A	N/A
Pfam	UHGV-0386581_22	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0386581_22	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0386581_23	K11062	97.5	1.1e-28	entD; probable enterotoxin D	N/A
PHROG	UHGV-0386581_23	phrog_3088	173.3	0	amidase	lysis
UniRef90	UHGV-0386581_23	UniRef90_A0A174XN03	494.0	0	Putative N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0386581_23	1151292.QEW_0991	200.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0386581_23	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0386581_23	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0386581_23	PF01510,PF19127,MF_04111,NF008758,TIGR04035,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_25	phrog_1758	156.4	0	acetyltransferase	other
UniRef90	UHGV-0386581_25	UniRef90_UPI001D0630E0	350.0	0	N-acetyltransferase	N/A
eggNOG-mapper	UHGV-0386581_25	1235798.C817_03484	249.0	0	acetyltransferase	N/A
COG	UHGV-0386581_25	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
structural_annotation	UHGV-0386581_25	PF13673,MF_02210,NF000360,COG2153	N/A	N/A	N/A	N/A
PHROG	UHGV-0386581_26	phrog_3291	82.3	3.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0386581_26	658086.HMPREF0994_06176	79.7	2.28e-19	N/A	N/A