UHGV-0386968 (vOTU-153553)

Viral Genome: UHGV-0386968

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0386968
vOTU ID	vOTU-153553
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_4750
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.68 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9814
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.28
Jumbo phage	No

Genome content
Genome length (bp)	24,437
GC content	48.01%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	34
CDS density	94%
Average CDS length (bps)	674.65
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0386968_1	phrog_1009	40.2	0.000000000053	N/A	unknown function
eggNOG-mapper	UHGV-0386968_1	97138.C820_00248	62.0	0.0000000000122	N/A	N/A
PHROG	UHGV-0386968_2	phrog_1129	65.1	7.9e-19	holin	lysis
UniRef90	UHGV-0386968_2	UniRef90_A0A416MDZ9	132.0	1.07e-38	Enolase	N/A
eggNOG-mapper	UHGV-0386968_2	742740.HMPREF9474_03522	120.0	1.25e-34	N/A	N/A
Pfam	UHGV-0386968_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0386968_2	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0386968_3	K01448	151.3	8.40779e-45	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0386968_3	phrog_18955	192.9	0	N/A	unknown function
UniRef90	UHGV-0386968_3	UniRef90_A0A1C6JAB9	395.0	0	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0386968_3	1226322.HMPREF1545_00782	280.0	0	N/A	N/A
Pfam	UHGV-0386968_3	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0386968_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0386968_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0386968_3	PF01520,PF09992,MF_00417,TIGR02883,COG0860,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_5	phrog_4912	88.8	6.6e-26	tail fiber assembly	tail
UniRef90	UHGV-0386968_5	UniRef90_A0A8A6KGY5	80.1	1.41e-16	Phage tail assembly chaperone	N/A
eggNOG-mapper	UHGV-0386968_5	666685.R2APBS1_2865	82.4	1.71e-18	Phage tail assembly chaperone protein	N/A
Pfam	UHGV-0386968_5	PF16778	N/A	N/A	Phage tail assembly chaperone protein	Phage_tail_APC
structural_annotation	UHGV-0386968_5	PF16778	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0386968_6	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_7	phrog_18725	104.0	1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0386968_7	1226322.HMPREF1545_00062	139.0	6.83e-39	N/A	N/A
structural_annotation	UHGV-0386968_7	PF13754,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-0386968_8	K01361	68.7	3.7e-20	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0386968_8	phrog_11157	237.0	0	N/A	unknown function
UniRef90	UHGV-0386968_8	UniRef90_UPI001C10C6DC	393.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0386968_8	476272.RUMHYD_02867	282.0	0	N/A	N/A
Pfam	UHGV-0386968_8	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0386968_8	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0386968_8	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0386968_8	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0386968_9	1540257.JQMW01000009_gene3383	54.3	0.0000095	N/A	N/A
COG	UHGV-0386968_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
PHROG	UHGV-0386968_10	phrog_13879	286.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0386968_10	693746.OBV_18210	587.0	0	N/A	N/A
structural_annotation	UHGV-0386968_10	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_11	phrog_1194	62.2	7.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0386968_11	1226322.HMPREF1545_00060	237.0	0	N/A	N/A
structural_annotation	UHGV-0386968_11	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_12	phrog_1535	87.4	1.6e-31	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0386968_12	693746.OBV_18190	204.0	0	domain protein	N/A
COG	UHGV-0386968_12	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0386968_12	PF05546,TIGR02559	N/A	N/A	N/A	N/A
UniRef90	UHGV-0386968_13	UniRef90_UPI001C119CBB	127.0	8.25e-33	copper amine oxidase N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0386968_13	693746.OBV_27580	105.0	1.96e-25	Copper amine oxidase N-terminal domain	N/A
Pfam	UHGV-0386968_13	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
structural_annotation	UHGV-0386968_13	PF02883,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_14	phrog_706	125.2	4.9e-37	N/A	unknown function
UniRef90	UHGV-0386968_14	UniRef90_UPI000682A80B	226.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0386968_14	693746.OBV_18170	214.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0386968_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0386968_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_15	phrog_11299	83.0	3.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0386968_15	693746.OBV_18160	128.0	4.08e-36	N/A	N/A
structural_annotation	UHGV-0386968_15	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_16	phrog_3099	90.3	2.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0386968_16	1232443.BAIA02000078_gene23	285.0	0	N/A	N/A
structural_annotation	UHGV-0386968_16	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_17	phrog_3266	60.7	2.2e-17	tail completion	connector
UniRef90	UHGV-0386968_17	UniRef90_A0A2Z4QA01	116.0	6.2e-31	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0386968_17	1232443.BAIA02000078_gene24	249.0	0	N/A	N/A
structural_annotation	UHGV-0386968_17	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_18	phrog_556	74.2	1.4e-21	minor head protein	head and packaging
UniRef90	UHGV-0386968_18	UniRef90_UPI00195E1497	228.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0386968_18	1226322.HMPREF1545_00054	179.0	0	Minor capsid protein	N/A
Pfam	UHGV-0386968_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0386968_18	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_19	phrog_3366	93.4	2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0386968_19	1226322.HMPREF1545_00053	209.0	0	N/A	N/A
structural_annotation	UHGV-0386968_19	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_20	phrog_541	110.9	6.3e-33	head-tail adaptor	connector
eggNOG-mapper	UHGV-0386968_20	1120998.AUFC01000030_gene2237	71.2	0.0000000000000577	N/A	N/A
eggNOG-mapper	UHGV-0386968_21	1226322.HMPREF1545_00051	200.0	0	N/A	N/A
PHROG	UHGV-0386968_22	phrog_10	171.8	0	major head protein	head and packaging
UniRef90	UHGV-0386968_22	UniRef90_U2SBS0	616.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0386968_22	1226322.HMPREF1545_00050	616.0	0	Phage capsid family	N/A
Pfam	UHGV-0386968_22	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0386968_22	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0386968_22	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0386968_22	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_23	phrog_2303	60.9	2.2e-17	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0386968_23	1226322.HMPREF1545_00049	199.0	0	N/A	N/A
structural_annotation	UHGV-0386968_24	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_26	phrog_581	263.4	0	minor head protein	head and packaging
UniRef90	UHGV-0386968_26	UniRef90_A0A1C5N7V1	545.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0386968_26	1226322.HMPREF1545_00046	407.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0386968_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0386968_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0386968_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_28	phrog_533	408.3	0	portal protein	head and packaging
UniRef90	UHGV-0386968_28	UniRef90_U2R2D2	782.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0386968_28	1226322.HMPREF1545_00044	782.0	0	N/A	N/A
Pfam	UHGV-0386968_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0386968_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0386968_29	K06909	93.7	2.1e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0386968_29	phrog_10250	128.6	3.7e-38	N/A	unknown function
UniRef90	UHGV-0386968_29	UniRef90_A0A1I3QR69	480.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0386968_29	1226322.HMPREF1545_00043	351.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0386968_29	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0386968_29	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0386968_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0386968_29	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0386968_30	phrog_930	74.9	1.3e-21	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0386968_30	UniRef90_A0A2E0SNN0	68.2	0.000000000001	Chromosome partitioning protein ParB (Fragment)	N/A
eggNOG-mapper	UHGV-0386968_30	879305.HMPREF9290_0148	64.3	0.000000000185	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0386968_30	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0386968_30	COG0863	N/A	N/A	DNA modification methylase	N/A
PHROG	UHGV-0386968_31	phrog_2657	191.7	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0386968_31	UniRef90_A0A845R9C9	338.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0386968_31	411490.ANACAC_00702	307.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0386968_31	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0386968_31	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0386968_31	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0386968_31	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A