UHGV-0390148 (vOTU-071069)

Viral Genome: UHGV-0390148

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0390148
vOTU ID	vOTU-071069
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_1852
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.67 (High-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9809
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	42.33
Jumbo phage	No

Genome content
Genome length (bp)	41,630
GC content	48.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	91%
Average CDS length (bps)	689.18
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0390148_1	742733.HMPREF9469_00973	66.6	0.0000000000128	N/A	N/A
eggNOG-mapper	UHGV-0390148_2	931276.Cspa_c27110	51.2	0.000000075	N/A	N/A
PHROG	UHGV-0390148_4	phrog_1009	48.0	0.00000000000019	N/A	unknown function
UniRef90	UHGV-0390148_4	UniRef90_A0A3E2WI44	157.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0390148_4	742740.HMPREF9474_03521	145.0	2.38221e-44	N/A	N/A
PHROG	UHGV-0390148_5	phrog_1129	67.2	1.8e-19	holin	lysis
UniRef90	UHGV-0390148_5	UniRef90_A0A2N0KEV2	144.0	3.30706e-43	Enolase	N/A
eggNOG-mapper	UHGV-0390148_5	742740.HMPREF9474_03522	139.0	5.2899e-42	N/A	N/A
Pfam	UHGV-0390148_5	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0390148_5	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0390148_6	K11062	98.7	5e-29	entD; probable enterotoxin D	N/A
PHROG	UHGV-0390148_6	phrog_3088	175.4	0	amidase	lysis
UniRef90	UHGV-0390148_6	UniRef90_A0A174XN03	493.0	0	Putative N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0390148_6	1151292.QEW_0991	206.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0390148_6	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0390148_6	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0390148_6	PF01510,PF19127,MF_04111,NF008758,TIGR04035,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-0390148_7	K06400	264.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0390148_7	phrog_95	289.0	0	integrase	integration and excision
UniRef90	UHGV-0390148_7	UniRef90_A0A413L8U6	967.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0390148_7	1304866.K413DRAFT_0761	745.0	0	Recombinase	N/A
Pfam	UHGV-0390148_7	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0390148_7	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0390148_7	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0390148_7	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0390148_7	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_8	phrog_87	62.2	6.9e-18	metallo-protease	other
UniRef90	UHGV-0390148_8	UniRef90_A0A174WVM6	166.0	0	Gp23-like protein	N/A
eggNOG-mapper	UHGV-0390148_8	1121115.AXVN01000006_gene2176	134.0	4.74e-38	N/A	N/A
COG	UHGV-0390148_8	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0390148_8	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0390148_9	K22300	56.3	2e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0390148_9	phrog_8	75.5	6.6e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0390148_9	UniRef90_A0A1Y4RAE5	172.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0390148_9	697284.ERIC2_c10400	105.0	1.91e-24	sequence-specific DNA binding	N/A
PADLOC	UHGV-0390148_9	retron_type_VI_hth_cluster2_1	50.2	0.0000000000000094	N/A	Retron
Pfam	UHGV-0390148_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0390148_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0390148_10	K23779	42.0	0.000000000018	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0390148_10	phrog_3	50.4	0.000000000000091	transcriptional repressor	transcription regulation
UniRef90	UHGV-0390148_10	UniRef90_A0A2K9MSK7	58.9	0.000000000689	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0390148_10	1209989.TepiRe1_2547	53.5	0.0000000128	sequence-specific DNA binding	N/A
PADLOC	UHGV-0390148_10	Control_protein_00002	44.3	0.0000000000052	control protein	RM
Pfam	UHGV-0390148_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0390148_10	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0390148_13	UniRef90_UPI00164E5F09	125.0	3.2e-35	nitrogenase molybdenum-iron protein subunit beta	N/A
PHROG	UHGV-0390148_14	phrog_26484	129.5	7.6e-39	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0390148_14	UniRef90_A0A174X6P5	158.0	0	Bacterial seryl-tRNA synthetase related	N/A
eggNOG-mapper	UHGV-0390148_14	411902.CLOBOL_02549	95.9	2.55e-25	Transcriptional Coactivator p15 (PC4)	N/A
Pfam	UHGV-0390148_14	PF02229	N/A	N/A	Transcriptional Coactivator p15 (PC4)	PC4
COG	UHGV-0390148_14	COG4443	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0390148_14	COG4443	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_15	phrog_22695	120.2	1.5e-36	N/A	unknown function
eggNOG-mapper	UHGV-0390148_15	1120746.CCNL01000014_gene2206	86.3	2.35e-19	N/A	N/A
KOfam	UHGV-0390148_16	K07465	43.7	0.0000000000037	K07465; putative RecB family exonuclease	N/A
PHROG	UHGV-0390148_16	phrog_69	324.1	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0390148_16	UniRef90_UPI00189C4093	609.0	0	N/A	N/A
eggNOG-mapper	UHGV-0390148_16	1235799.C818_04197	541.0	0	N/A	N/A
Pfam	UHGV-0390148_16	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0390148_16	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0390148_16	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_19	phrog_112	194.8	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0390148_19	UniRef90_UPI000E4307C9	402.0	0	N/A	N/A
eggNOG-mapper	UHGV-0390148_19	1235799.C818_04198	335.0	0	N/A	N/A
Pfam	UHGV-0390148_19	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0390148_19	PF10991,MF_04153,NF005241	N/A	N/A	N/A	N/A
KOfam	UHGV-0390148_20	K02334	846.1	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0390148_20	phrog_17	388.3	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0390148_20	UniRef90_A0A174XFA1	1250.0	0	DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains	N/A
eggNOG-mapper	UHGV-0390148_20	1235799.C818_04199	984.0	0	DNA polymerase A domain	N/A
Pfam	UHGV-0390148_20	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0390148_20	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0390148_20	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_21	phrog_256	1031.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0390148_21	UniRef90_A0A174X6U4	1614.0	0	Putative P-loop ATPase	N/A
eggNOG-mapper	UHGV-0390148_21	1235799.C818_04200	1198.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0390148_21	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0390148_21	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0390148_21	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_22	phrog_93	63.1	3.9e-18	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0390148_22	UniRef90_A0A174K5Q6	180.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0390148_22	1235799.C818_04201	112.0	5.79e-31	VRR_NUC	N/A
Pfam	UHGV-0390148_22	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-0390148_23	K14440	120.9	3.9e-36	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0390148_23	phrog_62	416.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0390148_23	UniRef90_A0A174X759	916.0	0	DNA/RNA helicase, superfamily II, SNF2 family	N/A
eggNOG-mapper	UHGV-0390148_23	1235799.C818_04202	784.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-0390148_23	ZorD1_00007	86.9	1.7e-25	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0390148_23	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0390148_23	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0390148_23	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0390148_23	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0390148_24	PF16535,NF011863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0390148_25	PF11331,TIGR02098	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_27	phrog_9820	44.5	0.0000000000016	N/A	unknown function
UniRef90	UHGV-0390148_27	UniRef90_A0A5D4MDK0	70.5	0.000000000000268	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0390148_27	97139.C824_00748	141.0	5.47067e-42	N/A	N/A
PHROG	UHGV-0390148_31	phrog_25231	75.5	4.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0390148_31	610130.Closa_1383	48.5	0.00000218	N/A	N/A
AcrCatalog	UHGV-0390148_31	cluster_23365	98.2	2.55e-30	NA	N/A
structural_annotation	UHGV-0390148_31	PF04936	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_32	phrog_36	51.7	0.000000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-0390148_32	UniRef90_A0A174NEV8	271.0	0	ECF subfamily RNA polymerase sigma-24 subunit	N/A
eggNOG-mapper	UHGV-0390148_32	742740.HMPREF9474_03497	202.0	0	N/A	N/A
structural_annotation	UHGV-0390148_32	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_33	phrog_606	63.4	4e-18	terminase small subunit	head and packaging
UniRef90	UHGV-0390148_33	UniRef90_UPI001D088AD3	221.0	0	DNA-packaging protein	N/A
Pfam	UHGV-0390148_33	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0390148_33	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0390148_34	K06909	75.8	6.7e-22	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0390148_34	phrog_2	51.6	0.000000000000021	terminase large subunit	head and packaging
UniRef90	UHGV-0390148_34	UniRef90_A0A174WYX0	845.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0390148_34	1298920.KI911353_gene4856	771.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0390148_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0390148_34	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_35	phrog_533	290.4	0	portal protein	head and packaging
UniRef90	UHGV-0390148_35	UniRef90_A0A174WUZ7	1011.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0390148_35	742740.HMPREF9474_03501	846.0	0	N/A	N/A
structural_annotation	UHGV-0390148_35	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_36	phrog_25639	135.1	1.10001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0390148_36	742740.HMPREF9474_03502	110.0	8.29e-31	N/A	N/A
PHROG	UHGV-0390148_37	phrog_581	258.7	0	minor head protein	head and packaging
UniRef90	UHGV-0390148_37	UniRef90_A0A1I0K7T0	905.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0390148_37	742740.HMPREF9474_03503	621.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0390148_37	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0390148_37	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0390148_37	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_39	phrog_2303	149.7	1.96182e-44	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0390148_39	742740.HMPREF9474_03504	246.0	0	N/A	N/A
PHROG	UHGV-0390148_40	phrog_422	342.4	0	major head protein	head and packaging
UniRef90	UHGV-0390148_40	UniRef90_E7GRG0	563.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0390148_40	742740.HMPREF9474_03505	563.0	0	N/A	N/A
structural_annotation	UHGV-0390148_40	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_41	phrog_1378	68.5	4.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0390148_41	742740.HMPREF9474_03506	128.0	1.99e-37	N/A	N/A
PHROG	UHGV-0390148_42	phrog_8710	144.0	3.29305e-43	N/A	unknown function
eggNOG-mapper	UHGV-0390148_42	742740.HMPREF9474_03508	210.0	0	N/A	N/A
structural_annotation	UHGV-0390148_42	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_43	phrog_556	55.2	0.0000000000000011	minor head protein	head and packaging
eggNOG-mapper	UHGV-0390148_43	742740.HMPREF9474_03509	191.0	0	N/A	N/A
PHROG	UHGV-0390148_44	phrog_2595	79.2	4.6e-23	head-tail connector protein	connector
UniRef90	UHGV-0390148_44	UniRef90_UPI001D068DAC	181.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0390148_44	742740.HMPREF9474_03510	236.0	0	N/A	N/A
Pfam	UHGV-0390148_44	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0390148_44	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_45	phrog_820	130.2	9.7e-39	major tail protein	tail
eggNOG-mapper	UHGV-0390148_45	742740.HMPREF9474_03511	214.0	0	domain, Protein	N/A
COG	UHGV-0390148_45	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0390148_45	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_46	phrog_8300	98.6	4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0390148_46	742740.HMPREF9474_03512	112.0	3.14e-31	N/A	N/A
structural_annotation	UHGV-0390148_46	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_47	phrog_8355	97.9	3.7e-29	N/A	unknown function
UniRef90	UHGV-0390148_47	UniRef90_A0A1I0K8W5	158.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0390148_47	742740.HMPREF9474_03513	159.0	0	N/A	N/A
Pfam	UHGV-0390148_47	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0390148_47	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_48	phrog_1535	398.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0390148_48	UniRef90_A0A174WQ97	1112.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0390148_48	742740.HMPREF9474_03514	837.0	0	tape measure	N/A
COG	UHGV-0390148_48	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0390148_48	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_49	phrog_1194	68.0	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0390148_49	1298920.KI911353_gene4840	190.0	0	N/A	N/A
structural_annotation	UHGV-0390148_49	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_50	phrog_13879	342.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0390148_50	742740.HMPREF9474_03516	595.0	0	N/A	N/A
structural_annotation	UHGV-0390148_50	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_51	phrog_18725	80.1	2.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0390148_51	742740.HMPREF9474_03517	132.0	3.57e-38	N/A	N/A
PHROG	UHGV-0390148_52	phrog_30220	43.8	0.0000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0390148_52	610130.Closa_0859	57.0	0.00000381	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0390148_52	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0390148_52	PF20620,NF038128	N/A	N/A	N/A	N/A
PHROG	UHGV-0390148_55	phrog_19280	51.4	0.0000000000000082	N/A	unknown function
UniRef90	UHGV-0390148_55	UniRef90_A0A174NC72	512.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0390148_55	742733.HMPREF9469_00973	180.0	1.16308e-43	N/A	N/A
structural_annotation	UHGV-0390148_55	PF10651	N/A	N/A	N/A	N/A