UHGV-0391987 (vOTU-052536)

Viral Genome: UHGV-0391987

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0391987
vOTU ID	vOTU-052536
Representative Genome?	Yes
Source	Benler
Original genome ID	OMGY01000597.1
Associated BioSample	SAMN05578579
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9713
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.54
Jumbo phage	No

Genome content
Genome length (bp)	41,001
GC content	48.00%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	97%
Average CDS length (bps)	883.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0391987_3	phrog_267	91.6	8.9e-27	major head protein	head and packaging
UniRef90	UHGV-0391987_3	UniRef90_A0A7C6CNA9	184.0	0	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0391987_3	665956.HMPREF1032_03906	309.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0391987_3	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_5	phrog_156	133.4	6.89999e-40	portal protein	head and packaging
UniRef90	UHGV-0391987_5	UniRef90_A0A8D9UHD1	276.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0391987_5	1121091.AUMP01000003_gene2583	246.0	0	N/A	N/A
structural_annotation	UHGV-0391987_5	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_7	phrog_24361	85.5	4.8e-25	terminase	head and packaging
UniRef90	UHGV-0391987_7	UniRef90_R6ELB5	453.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0391987_7	445971.ANASTE_00711	207.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0391987_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0391987_7	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-0391987_8	UniRef90_UPI000B34C540	82.4	2.27e-16	helix-turn-helix domain-containing protein	N/A
PHROG	UHGV-0391987_9	phrog_774	42.3	0.000000000016	N/A	unknown function
structural_annotation	UHGV-0391987_9	PF10458	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0391987_10	PF04545,MF_00674,NF008895,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_12	phrog_986	99.2	2.7e-29	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0391987_12	UniRef90_A0A5E5PDL1	82.4	6.33e-18	N/A	N/A
eggNOG-mapper	UHGV-0391987_12	393305.YE0860	72.4	0.00000000000015	N/A	N/A
Pfam	UHGV-0391987_12	PF12961	N/A	N/A	N/A	DUF3850
PHROG	UHGV-0391987_16	phrog_5984	63.4	4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0391987_16	1235835.C814_01168	104.0	1.72e-28	N/A	N/A
structural_annotation	UHGV-0391987_16	PF19561	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_17	phrog_23660	64.4	8.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0391987_17	1226322.HMPREF1545_03534	72.4	0.000000000000378	N/A	N/A
KOfam	UHGV-0391987_18	K00558	184.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0391987_18	phrog_116	213.5	0	DNA methyltransferase	other
UniRef90	UHGV-0391987_18	UniRef90_A0A316NA61	372.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0391987_18	718252.FP2_16350	361.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0391987_18	oMTase_00004	202.4	0	orphan methyltransferase	RM
Pfam	UHGV-0391987_18	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0391987_18	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0391987_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0391987_18	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0391987_19	K02315	173.3	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0391987_19	phrog_50	161.9	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0391987_19	UniRef90_F7V9D6	134.0	4e-34	Putative DnaC	N/A
eggNOG-mapper	UHGV-0391987_19	1399942.U3PBJ1_9CAUD	135.0	1.68e-35	IstB-like ATP binding protein	N/A
Pfam	UHGV-0391987_19	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
structural_annotation	UHGV-0391987_19	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_20	phrog_8489	245.3	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0391987_20	UniRef90_A0A6A4UXR4	221.0	0	Phage replication initiation	N/A
eggNOG-mapper	UHGV-0391987_20	1507.HMPREF0262_00303	189.0	0	DnaD domain protein	N/A
COG	UHGV-0391987_20	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0391987_20	TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0391987_21	K03111	151.2	9.80909e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0391987_21	phrog_44	148.4	3.64338e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0391987_21	UniRef90_A0A2V2ET02	192.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0391987_21	1341151.ASZU01000008_gene1367	132.0	1.19e-37	Single-strand binding protein family	N/A
Pfam	UHGV-0391987_21	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0391987_21	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0391987_21	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0391987_21	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0391987_21	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_23	phrog_7566	116.2	1.1e-34	N/A	unknown function
eggNOG-mapper	UHGV-0391987_23	508419.F8J187_9CAUD	111.0	8.71e-31	N/A	N/A
PHROG	UHGV-0391987_24	phrog_72	64.8	1.3e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0391987_24	428127.EUBDOL_01246	84.3	5.05e-18	N/A	N/A
Pfam	UHGV-0391987_24	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0391987_24	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_25	phrog_155	100.6	1.7e-29	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0391987_25	UniRef90_UPI000B80248C	162.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0391987_25	420246.GTNG_2854	145.0	1.35e-40	ERF superfamily	N/A
Pfam	UHGV-0391987_25	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0391987_25	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_26	phrog_298	105.6	4.4e-31	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0391987_26	UniRef90_A0A6M3JN22	202.0	0	Putative PD-(D/E)XK nuclease superfamily protein	N/A
eggNOG-mapper	UHGV-0391987_26	1171373.PACID_15720	69.7	0.0000000000207	Belongs to the helicase family. UvrD subfamily	N/A
COG	UHGV-0391987_26	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0391987_26	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
Pfam	UHGV-0391987_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0391987_28	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0391987_28	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_30	phrog_4583	41.2	0.00000000002	transcriptional repressor	transcription regulation
UniRef90	UHGV-0391987_30	UniRef90_A0A7X7VR24	57.4	0.00000000175	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0391987_30	484770.UFO1_1664	55.8	0.00000000114	N/A	N/A
Pfam	UHGV-0391987_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0391987_30	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0391987_31	K22300	57.5	3.1e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0391987_31	phrog_8	47.0	0.00000000000054	transcriptional regulator	transcription regulation
UniRef90	UHGV-0391987_31	UniRef90_A0A6B4N8R4	78.6	0.00000000000000102	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0391987_31	1415775.U729_2578	73.6	0.00000000000000995	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0391987_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0391987_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0391987_31	PF12844,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0391987_33	K06400	355.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0391987_33	phrog_95	348.1	0	integrase	integration and excision
UniRef90	UHGV-0391987_33	UniRef90_A0A3D4S739	384.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0391987_33	657322.FPR_03320	360.0	0	N/A	N/A
Pfam	UHGV-0391987_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0391987_33	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0391987_33	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0391987_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0391987_33	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_34	phrog_22978	247.9	0	N/A	unknown function
UniRef90	UHGV-0391987_34	UniRef90_E2ZIB5	216.0	0	Putative septum site-determining protein MinC	N/A
eggNOG-mapper	UHGV-0391987_34	1410650.JHWL01000003_gene2814	227.0	0	N/A	N/A
Pfam	UHGV-0391987_34	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
Pfam	UHGV-0391987_34	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
KOfam	UHGV-0391987_41	K00986	150.0	1.96182e-44	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0391987_41	phrog_1423	243.1	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0391987_41	UniRef90_A0A1Q6RLC1	490.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0391987_41	755164.D6PSR5_9CAUD	273.0	0	RNA-directed DNA polymerase activity	N/A
PADLOC	UHGV-0391987_41	icity0040	102.7	6.6e-30	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0391987_41	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
structural_annotation	UHGV-0391987_41	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0391987_42	phrog_5302	226.4	0	tail protein	tail
UniRef90	UHGV-0391987_42	UniRef90_UPI001951D0C2	190.0	0	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-0391987_42	445970.ALIPUT_02628	116.0	5.44e-26	N/A	N/A
structural_annotation	UHGV-0391987_42	COG1262	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0391987_43	33035.JPJF01000033_gene2261	64.7	0.0000000254	tail collar domain protein	N/A
COG	UHGV-0391987_43	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0391987_44	phrog_3287	90.8	4.4e-28	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0391987_44	665956.HMPREF1032_03917	155.0	7.38e-37	N/A	N/A
structural_annotation	UHGV-0391987_44	PF11134,MF_01282,TIGR03300,COG2319	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0391987_45	PF20387	N/A	N/A	N/A	N/A