UHGV-0392100 (vOTU-116375)

Viral Genome: UHGV-0392100

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0392100
vOTU ID	vOTU-116375
Representative Genome?	Yes
Source	COPSAC
Original genome ID	OTU_2451
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	69.13 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9815
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.87
Jumbo phage	No

Genome content
Genome length (bp)	39,108
GC content	37.36%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	94%
Average CDS length (bps)	717.88
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0392100_2	phrog_6918	53.8	0.000000000000003	holin	lysis
Pfam	UHGV-0392100_2	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0392100_2	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_3	phrog_4259	60.9	1.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0392100_3	742740.HMPREF9474_02276	53.1	0.000000108	N/A	N/A
PHROG	UHGV-0392100_4	phrog_4321	142.3	1.3004e-42	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0392100_4	UniRef90_X4YEE5	125.0	3.49e-34	Homing endonuclease	N/A
eggNOG-mapper	UHGV-0392100_4	475178.B2BTG9_9CAUD	118.0	3.13e-32	N/A	N/A
PHROG	UHGV-0392100_5	phrog_4247	65.6	5.5e-19	virion structural protein	head and packaging
PHROG	UHGV-0392100_6	phrog_7021	45.5	0.0000000000011	N/A	unknown function
PHROG	UHGV-0392100_7	phrog_9	260.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0392100_7	UniRef90_A0A5C7M263	775.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0392100_7	691965.D4P7C5_9CAUD	769.0	0	Phage Terminase	N/A
Pfam	UHGV-0392100_7	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0392100_7	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-0392100_7	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_8	phrog_12	103.0	1.8e-30	portal protein	head and packaging
UniRef90	UHGV-0392100_8	UniRef90_A0A1C5N1E3	324.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0392100_8	742740.HMPREF9474_02271	315.0	0	Phage portal protein	N/A
Pfam	UHGV-0392100_8	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0392100_8	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0392100_9	K06904	87.0	1.9e-25	N/A	N/A
PHROG	UHGV-0392100_9	phrog_3270	557.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0392100_9	UniRef90_A0A6G5Y7H0	405.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0392100_9	1476888.X4YUP1_9CAUD	369.0	0	peptidase activity	N/A
Pfam	UHGV-0392100_9	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
structural_annotation	UHGV-0392100_9	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_10	phrog_4270	90.2	1.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0392100_10	478749.BRYFOR_08520	75.1	7.81e-16	N/A	N/A
structural_annotation	UHGV-0392100_10	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_11	phrog_2645	310.3	0	major tail protein	tail
UniRef90	UHGV-0392100_11	UniRef90_A0A2U8UHX0	238.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0392100_11	742740.HMPREF9474_02267	232.0	0	N/A	N/A
structural_annotation	UHGV-0392100_11	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_12	phrog_4282	119.4	2.5e-35	N/A	unknown function
UniRef90	UHGV-0392100_12	UniRef90_D4P7H5	75.5	0.0000000000000423	Gp064	N/A
eggNOG-mapper	UHGV-0392100_12	742733.HMPREF9469_05024	72.4	0.0000000000000207	N/A	N/A
PHROG	UHGV-0392100_13	phrog_4338	127.8	5.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-0392100_13	428125.CLOLEP_01417	85.9	1.84e-18	N/A	N/A
PHROG	UHGV-0392100_15	phrog_5	48.3	0.00000000000028	tail completion or Neck1 protein	connector
UniRef90	UHGV-0392100_15	UniRef90_A0A7X5IVV8	66.6	0.0000000000117	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0392100_15	742740.HMPREF9474_02263	65.1	0.00000000000743	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0392100_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0392100_15	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_16	phrog_32444	40.4	0.000000000036	N/A	unknown function
PHROG	UHGV-0392100_18	phrog_4372	502.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0392100_18	742733.HMPREF9469_05020	308.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0392100_18	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0392100_18	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0392100_18	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0392100_19	phrog_33	55.0	0.0000000000000017	distal tail protein Dit	tail
UniRef90	UHGV-0392100_19	UniRef90_A0A4R7KUL7	75.9	0.000000000000932	Putative phage tail component-like protein	N/A
eggNOG-mapper	UHGV-0392100_19	272626.lin2567	93.6	5.27e-20	phage tail	N/A
COG	UHGV-0392100_19	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0392100_19	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_20	phrog_1330	252.4	0	tail protein	tail
UniRef90	UHGV-0392100_20	UniRef90_UPI001C9478D8	66.6	0.000000611	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0392100_20	1158604.I591_01756	140.0	2.02e-30	Prophage endopeptidase tail	N/A
Pfam	UHGV-0392100_20	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0392100_20	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
NCBIFam	UHGV-0392100_20	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0392100_20	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0392100_20	PF14594,PF00629,PF10528,TIGR01665,NF033675,NF038393,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_22	phrog_1554	101.7	9.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-0392100_22	997830.HMPREF1124_0611	77.4	0.00000000000000629	N/A	N/A
structural_annotation	UHGV-0392100_22	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-0392100_27	phrog_1494	73.6	2.4e-21	N/A	unknown function
PHROG	UHGV-0392100_46	phrog_4079	139.0	4.99997e-41	N/A	unknown function
eggNOG-mapper	UHGV-0392100_46	665950.HMPREF1025_01947	75.1	0.0000000000000732	N/A	N/A