Viral Genome: UHGV-0400861


Overview
UHGV ID UHGV-0400861
vOTU ID vOTU-061121
Representative Genome? Yes
Source HuVirDB
Original genome ID ERS698731|NODE_14_length_35726_cov_26.637268
Associated BioSample SAMEA3323697
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 94.65 (High-quality)
Trimmed provirus No
CheckV viral markers 21
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9753
Virus hallmark genes (geNomad) 14
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 57.71
Jumbo phage No

Genome content
Genome length (bp) 35,726
GC content 43.27%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 57
CDS density 92%
Average CDS length (bps) 576.16
Total tRNA genes 0
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 94.65)
x
This website uses cookies to improve user experience. By using this service you consent to all cookies in accordance with our privacy policy. OK