UHGV-0406696 (vOTU-135137)

Viral Genome: UHGV-0406696

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0406696
vOTU ID	vOTU-135137
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	ERS698798\|NODE_14_length_21309_cov_377.326244
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.24 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9759
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.81
Jumbo phage	No

Genome content
Genome length (bp)	21,309
GC content	50.67%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	42
CDS density	91%
Average CDS length (bps)	460.79
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0406696_2	33035.JPJF01000135_gene5083	48.5	0.00000244	N/A	N/A
PHROG	UHGV-0406696_3	phrog_14970	249.4	0	N/A	unknown function
UniRef90	UHGV-0406696_3	UniRef90_A0A3P6JH63	209.0	0	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-0406696_3	411468.CLOSCI_00315	204.0	0	double-strand break repair protein	N/A
COG	UHGV-0406696_3	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0406696_3	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_4	phrog_72	60.3	2.3e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0406696_4	UniRef90_UPI001F3F3E5C	203.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0406696_4	1507.HMPREF0262_00432	127.0	1.17e-34	N/A	N/A
structural_annotation	UHGV-0406696_4	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_5	phrog_7566	59.5	4.2e-17	N/A	unknown function
KOfam	UHGV-0406696_6	K03111	140.8	1.40004e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0406696_6	phrog_44	142.8	1.99965e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0406696_6	UniRef90_A0A6S6XCU6	187.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0406696_6	428125.CLOLEP_00518	179.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0406696_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0406696_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0406696_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0406696_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0406696_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_7	phrog_16304	54.2	0.0000000000000011	N/A	unknown function
UniRef90	UHGV-0406696_7	UniRef90_A0A3D3Y5P0	84.7	4.16e-16	N/A	N/A
eggNOG-mapper	UHGV-0406696_7	1384065.JAGS01000001_gene1055	68.2	0.0000000000893	N/A	N/A
Pfam	UHGV-0406696_7	PF19808	N/A	N/A	N/A	DUF6291
KOfam	UHGV-0406696_8	K02314	266.5	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0406696_8	phrog_19	272.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0406696_8	UniRef90_A0A1Y4EVJ1	462.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0406696_8	665956.HMPREF1032_02618	167.0	8.40779e-45	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0406696_8	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0406696_8	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0406696_8	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0406696_8	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_10	phrog_190	95.6	3.9e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0406696_10	UniRef90_A0A7V6W6S0	131.0	1.49e-37	N/A	N/A
eggNOG-mapper	UHGV-0406696_10	1347392.CCEZ01000043_gene417	82.8	6.55e-19	N/A	N/A
Pfam	UHGV-0406696_10	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0406696_10	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_14	phrog_599	41.6	0.000000000022	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0406696_14	UniRef90_A0A4D7ANR2	94.4	3.3e-23	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0406696_14	742738.HMPREF9460_04054	79.0	6.01e-18	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0406696_14	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0406696_14	PF14354,NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_16	phrog_25732	55.9	4.2e-16	N/A	unknown function
Pfam	UHGV-0406696_16	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0406696_19	phrog_38832	62.2	7.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0406696_19	665956.HMPREF1032_03087	68.2	0.000000000000978	N/A	N/A
Pfam	UHGV-0406696_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0406696_20	PF12844,MF_00535,TIGR03070,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0406696_21	693746.OBV_25230	112.0	3.14e-30	N/A	N/A
structural_annotation	UHGV-0406696_21	PF06530,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0406696_25	K06909	388.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0406696_25	phrog_5653	162.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0406696_25	UniRef90_A0A2U1BEH4	747.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0406696_25	33035.JPJF01000106_gene3136	454.0	0	Terminase small subunit	N/A
Pfam	UHGV-0406696_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0406696_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0406696_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0406696_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0406696_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_26	phrog_533	388.9	0	portal protein	head and packaging
UniRef90	UHGV-0406696_26	UniRef90_A0A2U1BEK0	797.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-0406696_26	1226322.HMPREF1545_00044	743.0	0	N/A	N/A
Pfam	UHGV-0406696_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0406696_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_27	phrog_355	57.5	2.2e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0406696_27	UniRef90_UPI0019572D92	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-0406696_27	411473.RUMCAL_00360	136.0	1.47e-40	N/A	N/A
Pfam	UHGV-0406696_27	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0406696_27	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_28	phrog_581	288.9	0	minor head protein	head and packaging
UniRef90	UHGV-0406696_28	UniRef90_UPI001D080D49	554.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0406696_28	1226322.HMPREF1545_00046	427.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0406696_28	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0406696_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0406696_28	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0406696_29	PF18152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0406696_31	PF03869,NF010256	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0406696_32	1226322.HMPREF1545_00049	144.0	6.06062e-42	N/A	N/A
PHROG	UHGV-0406696_33	phrog_10	177.3	0	major head protein	head and packaging
UniRef90	UHGV-0406696_33	UniRef90_U2SBS0	628.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0406696_33	1226322.HMPREF1545_00050	628.0	0	Phage capsid family	N/A
Pfam	UHGV-0406696_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0406696_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0406696_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0406696_33	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0406696_34	K24213	44.2	0.0000000000022	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0406696_34	phrog_34916	75.0	8.4e-22	tail fiber protein	tail
UniRef90	UHGV-0406696_34	UniRef90_UPI0018A8F63F	120.0	4.21e-33	collagen-like protein	N/A
eggNOG-mapper	UHGV-0406696_34	1203606.HMPREF1526_01905	93.2	7.12e-23	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0406696_34	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0406696_34	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-0406696_35	phrog_541	109.5	1.7e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0406696_35	642492.Clole_0822	68.6	0.000000000000849	N/A	N/A
PHROG	UHGV-0406696_36	phrog_3366	108.3	5.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0406696_36	1226322.HMPREF1545_00053	218.0	0	N/A	N/A
structural_annotation	UHGV-0406696_36	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_37	phrog_556	62.3	6.8e-18	minor head protein	head and packaging
UniRef90	UHGV-0406696_37	UniRef90_UPI00195E1497	230.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0406696_37	1226322.HMPREF1545_00054	174.0	0	Minor capsid protein	N/A
Pfam	UHGV-0406696_37	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0406696_37	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_38	phrog_3266	53.2	0.0000000000000043	tail completion	connector
UniRef90	UHGV-0406696_38	UniRef90_A0A2Z4QA01	105.0	2.15e-26	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0406696_38	1232443.BAIA02000078_gene24	244.0	0	N/A	N/A
structural_annotation	UHGV-0406696_38	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_39	phrog_3099	104.1	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0406696_39	1232443.BAIA02000078_gene23	268.0	0	N/A	N/A
structural_annotation	UHGV-0406696_39	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_40	phrog_11299	83.7	2.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0406696_40	693746.OBV_18160	185.0	0	N/A	N/A
structural_annotation	UHGV-0406696_40	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0406696_41	phrog_706	111.4	7.5e-33	N/A	unknown function
UniRef90	UHGV-0406696_41	UniRef90_A0A2U1BEN4	298.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0406696_41	693746.OBV_18170	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0406696_41	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0406696_41	PF06854	N/A	N/A	N/A	N/A