UHGV-0427720 (vOTU-160393)

Viral Genome: UHGV-0427720

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0427720
vOTU ID	vOTU-160393
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	ERS698662\|NODE_18_length_25866_cov_12.359653
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	77.06 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9698
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.04
Jumbo phage	No

Genome content
Genome length (bp)	25,866
GC content	40.15%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	93%
Average CDS length (bps)	512.87
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 77.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0427720_2	phrog_104	243.3	0	portal protein	head and packaging
UniRef90	UHGV-0427720_2	UniRef90_A0A1C5MKT6	589.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0427720_2	665950.HMPREF1025_02537	531.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0427720_2	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_3	phrog_2494	349.2	0	minor head protein	head and packaging
UniRef90	UHGV-0427720_3	UniRef90_A0A1C5MKJ0	588.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0427720_3	1280698.AUJS01000007_gene1034	426.0	0	cell adhesion	N/A
Pfam	UHGV-0427720_3	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0427720_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0427720_3	PF15542	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_4	phrog_1865	63.4	2.9e-18	N/A	unknown function
structural_annotation	UHGV-0427720_4	PF07073,MF_00436,NF008636,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_5	phrog_3675	44.9	0.0000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0427720_5	665950.HMPREF1025_02533	68.6	0.0000000000000236	YjcQ protein	N/A
Pfam	UHGV-0427720_5	PF09639	N/A	N/A	YjcQ protein	YjcQ
PHROG	UHGV-0427720_6	phrog_17688	347.2	0	N/A	unknown function
UniRef90	UHGV-0427720_6	UniRef90_A0A1C5Y909	729.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0427720_6	665950.HMPREF1025_02532	753.0	0	phage terminase, large subunit	N/A
COG	UHGV-0427720_6	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0427720_6	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_7	phrog_233	74.9	1.7e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-0427720_7	UniRef90_UPI001961E2FD	93.6	2.17e-21	N/A	N/A
eggNOG-mapper	UHGV-0427720_7	665950.HMPREF1025_02531	124.0	3.21e-34	N/A	N/A
Pfam	UHGV-0427720_7	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0427720_7	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_8	phrog_32396	153.7	0	N/A	unknown function
UniRef90	UHGV-0427720_8	UniRef90_A0A1C5MLP2	509.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-0427720_8	665950.HMPREF1025_02530	457.0	0	Phage capsid family	N/A
Pfam	UHGV-0427720_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-0427720_8	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_10	phrog_137	114.7	4.4e-34	head-tail adaptor Ad1	connector
UniRef90	UHGV-0427720_10	UniRef90_A0A1C5MM07	195.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-0427720_10	12390.Q77MV1_9CAUD	174.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0427720_10	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0427720_10	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_11	phrog_501	74.3	1.7e-21	head closure Hc1	connector
eggNOG-mapper	UHGV-0427720_11	665950.HMPREF1025_02528	124.0	1.42e-35	N/A	N/A
structural_annotation	UHGV-0427720_11	PF12206,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0427720_13	1280698.AUJS01000007_gene1043	114.0	1.83e-31	N/A	N/A
structural_annotation	UHGV-0427720_13	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_14	phrog_117	175.2	0	major tail protein	tail
UniRef90	UHGV-0427720_14	UniRef90_UPI00156E6ACC	263.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0427720_14	665950.HMPREF1025_02525	262.0	0	domain, Protein	N/A
COG	UHGV-0427720_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0427720_14	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_15	phrog_1526	89.4	2.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0427720_15	665950.HMPREF1025_02524	93.2	8.38e-24	N/A	N/A
PHROG	UHGV-0427720_16	phrog_1633	152.1	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0427720_16	UniRef90_UPI0006C2F0F2	156.0	0	N/A	N/A
eggNOG-mapper	UHGV-0427720_16	665950.HMPREF1025_02523	131.0	1.62e-37	N/A	N/A
Pfam	UHGV-0427720_16	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0427720_16	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_17	phrog_6900	253.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0427720_17	UniRef90_A0A1C5MMN2	495.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0427720_17	1280698.AUJS01000007_gene1047	480.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0427720_17	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0427720_17	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_18	phrog_33	56.6	6.8e-16	distal tail protein Dit	tail
UniRef90	UHGV-0427720_18	UniRef90_UPI001EDFA8F1	217.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0427720_18	665950.HMPREF1025_02521	280.0	0	N/A	N/A
structural_annotation	UHGV-0427720_18	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_19	phrog_538	225.8	0	minor tail protein	tail
UniRef90	UHGV-0427720_19	UniRef90_UPI001C3AB50C	408.0	0	Siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0427720_19	658655.HMPREF0988_02550	424.0	0	N/A	N/A
Pfam	UHGV-0427720_19	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0427720_19	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_20	phrog_13141	145.5	2.70451e-43	N/A	unknown function
UniRef90	UHGV-0427720_20	UniRef90_D4N0S7	98.2	2.39e-18	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0427720_20	658655.HMPREF0988_02549	206.0	0	N/A	N/A
Pfam	UHGV-0427720_20	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
PHROG	UHGV-0427720_21	phrog_1009	51.6	0.000000000000014	N/A	unknown function
UniRef90	UHGV-0427720_21	UniRef90_A0A2Z4UCW9	162.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0427720_21	665950.HMPREF1025_02515	160.0	0	N/A	N/A
PHROG	UHGV-0427720_22	phrog_1129	92.3	2.5e-27	holin	lysis
UniRef90	UHGV-0427720_22	UniRef90_UPI001BC82F37	148.0	1.12104e-44	phage holin family protein	N/A
eggNOG-mapper	UHGV-0427720_22	742733.HMPREF9469_05010	133.0	2.32e-39	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0427720_22	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0427720_22	PF16079	N/A	N/A	N/A	N/A
KOfam	UHGV-0427720_23	K01447	76.6	5e-22	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0427720_23	phrog_1794	172.0	0	amidase	lysis
UniRef90	UHGV-0427720_23	UniRef90_A0A143XDI8	299.0	0	N-acetylmuramoyl-L-alanine amidase CwlH	N/A
eggNOG-mapper	UHGV-0427720_23	397288.C806_04859	286.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0427720_23	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0427720_23	PF09374	N/A	N/A	Predicted Peptidoglycan domain	PG_binding_3
Pfam	UHGV-0427720_23	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0427720_23	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0427720_23	PF01510,PF01471,MF_04111,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_24	phrog_130	200.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0427720_24	UniRef90_UPI001D06EEA0	402.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0427720_24	658655.HMPREF0988_00912	346.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0427720_24	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0427720_24	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0427720_24	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0427720_24	PF03374,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0427720_26	UniRef90_A0A371IIX7	68.9	0.0000000000000323	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-0427720_26	PF03869,COG4453	N/A	N/A	N/A	N/A
KOfam	UHGV-0427720_27	K14059	155.7	0	int; integrase	N/A
PHROG	UHGV-0427720_27	phrog_1	144.2	1.10002e-42	integrase	integration and excision
UniRef90	UHGV-0427720_27	UniRef90_A0A358PNN4	377.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0427720_27	585501.HMPREF6123_0870	243.0	0	Phage integrase family	N/A
Pfam	UHGV-0427720_27	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0427720_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0427720_27	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0427720_27	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_28	phrog_1847	351.6	0	N/A	unknown function
UniRef90	UHGV-0427720_28	UniRef90_UPI001D04F48E	648.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0427720_28	1256908.HMPREF0373_00641	611.0	0	T5orf172	N/A
Pfam	UHGV-0427720_28	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0427720_28	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0427720_28	PF13250,NF041454	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_29	phrog_20886	125.4	1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0427720_29	665950.HMPREF1025_02563	82.0	7.14e-20	N/A	N/A
structural_annotation	UHGV-0427720_29	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-0427720_30	K22300	55.9	0.000000000000001	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0427720_30	phrog_8	78.3	1.4e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0427720_30	UniRef90_A0A1Y4H090	187.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0427720_30	476272.RUMHYD_02826	146.0	1.26117e-43	TRANSCRIPTIONal	N/A
Pfam	UHGV-0427720_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0427720_30	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0427720_30	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_31	phrog_8	56.0	0.0000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0427720_31	UniRef90_UPI00130E3D9D	102.0	2.57e-27	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0427720_31	411459.RUMOBE_00960	102.0	4.91e-28	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0427720_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0427720_31	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0427720_36	PF21291,MF_00535,NF041951,COG1513	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_40	phrog_3584	213.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0427720_40	397290.C810_00404	305.0	0	N/A	N/A
structural_annotation	UHGV-0427720_40	PF11726	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0427720_41	411461.DORFOR_01140	84.7	4.35e-19	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-0427720_41	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0427720_41	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0427720_42	phrog_7566	108.0	3.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0427720_42	411459.RUMOBE_00948	122.0	2.54e-34	N/A	N/A
PHROG	UHGV-0427720_43	phrog_24368	74.3	1.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0427720_43	742740.HMPREF9474_04313	79.3	7.32e-17	N/A	N/A
PHROG	UHGV-0427720_44	phrog_3502	47.7	0.0000000000003	N/A	unknown function
UniRef90	UHGV-0427720_44	UniRef90_UPI00145EE134	57.0	0.00000000388	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0427720_44	1408423.JHYA01000001_gene1149	56.6	0.00000000877	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0427720_44	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-0427720_44	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
KOfam	UHGV-0427720_45	K03111	140.5	1.79997e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0427720_45	phrog_44	135.5	3.8e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0427720_45	UniRef90_D4J8W6	206.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0427720_45	1232447.BAHW02000038_gene2652	205.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0427720_45	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0427720_45	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0427720_45	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0427720_45	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0427720_45	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0427720_47	UniRef90_A0A1L8CWV7	48.1	0.00000265	HicB family protein	N/A
eggNOG-mapper	UHGV-0427720_47	1235835.C814_03454	73.6	2.52e-16	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
COG	UHGV-0427720_47	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A