UHGV-0447089 (vOTU-004798)

Viral Genome: UHGV-0447089

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0447089
vOTU ID	vOTU-004798
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	ERS698711\|NODE_13_length_35117_cov_874.439022
Associated BioSample	SAMEA3323677
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9733
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	51.01
Jumbo phage	No

Genome content
Genome length (bp)	35,062
GC content	45.05%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	95%
Average CDS length (bps)	692.63
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0447089_4	phrog_9680	51.4	6.4e-16	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0447089_4	1160721.RBI_II00526	763.0	0	N/A	N/A
structural_annotation	UHGV-0447089_4	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_5	phrog_1194	89.7	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0447089_5	1160721.RBI_II00527	207.0	0	N/A	N/A
structural_annotation	UHGV-0447089_5	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_6	phrog_1535	594.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0447089_6	UniRef90_R6TDK7	714.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0447089_6	1160721.RBI_II00528	461.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0447089_6	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-0447089_6	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_7	phrog_706	143.8	1.00053e-42	N/A	unknown function
UniRef90	UHGV-0447089_7	UniRef90_UPI001B3C82AE	208.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0447089_7	1449050.JNLE01000003_gene3882	192.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0447089_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0447089_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_8	phrog_11299	184.7	0	N/A	unknown function
structural_annotation	UHGV-0447089_8	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_9	phrog_3099	148.7	2.66247e-44	N/A	unknown function
eggNOG-mapper	UHGV-0447089_9	1160721.RBI_II00532	206.0	0	N/A	N/A
structural_annotation	UHGV-0447089_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_10	phrog_3266	123.4	1e-36	tail completion	connector
eggNOG-mapper	UHGV-0447089_10	411902.CLOBOL_00130	112.0	1.08e-29	N/A	N/A
structural_annotation	UHGV-0447089_10	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_11	phrog_556	124.0	5.2e-37	minor head protein	head and packaging
UniRef90	UHGV-0447089_11	UniRef90_UPI00143BEF55	125.0	2.42e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-0447089_11	1449050.JNLE01000003_gene3886	107.0	6.37e-28	N/A	N/A
Pfam	UHGV-0447089_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0447089_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_12	phrog_3366	74.5	1.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0447089_12	1449050.JNLE01000003_gene3887	82.4	1.09e-18	N/A	N/A
Pfam	UHGV-0447089_12	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0447089_12	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_13	phrog_541	91.2	8.7e-27	head-tail adaptor	connector
UniRef90	UHGV-0447089_13	UniRef90_A0A371AQT0	104.0	1.75e-26	N/A	N/A
eggNOG-mapper	UHGV-0447089_13	1304866.K413DRAFT_3039	95.1	1.41e-23	N/A	N/A
PHROG	UHGV-0447089_14	phrog_544	345.5	0	major head protein	head and packaging
UniRef90	UHGV-0447089_14	UniRef90_R6T873	667.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-0447089_14	936580.HMPREF1516_0718	313.0	0	N/A	N/A
NCBIFam	UHGV-0447089_14	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0447089_14	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_15	phrog_194	101.2	1.2e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0447089_15	UniRef90_R6U550	376.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0447089_15	742765.HMPREF9457_02126	153.0	1.10703e-43	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0447089_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0447089_16	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_17	phrog_581	336.4	0	minor head protein	head and packaging
UniRef90	UHGV-0447089_17	UniRef90_R6SXL7	998.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0447089_17	658655.HMPREF0988_02563	411.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0447089_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0447089_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0447089_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_18	phrog_533	346.0	0	portal protein	head and packaging
UniRef90	UHGV-0447089_18	UniRef90_R6TDI6	887.0	0	Phage portal protein SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0447089_18	1304866.K413DRAFT_3035	435.0	0	N/A	N/A
structural_annotation	UHGV-0447089_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0447089_19	K06909	420.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0447089_19	phrog_18557	160.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0447089_19	UniRef90_A0A1C6IMR2	1100.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0447089_19	411461.DORFOR_01162	664.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0447089_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0447089_19	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0447089_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0447089_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0447089_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_20	phrog_36	62.7	7e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0447089_20	UniRef90_A0A371AT86	57.0	0.000000213	N/A	N/A
KOfam	UHGV-0447089_22	K06919	108.6	5.3e-32	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0447089_22	phrog_1829	854.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0447089_22	UniRef90_A0A356CZ91	1545.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0447089_22	1410670.JHXF01000015_gene2274	836.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0447089_22	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0447089_22	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0447089_22	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0447089_22	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0447089_22	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0447089_22	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_23	phrog_378	94.9	1.1e-27	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0447089_23	UniRef90_A0A373SL44	372.0	0	N/A	N/A
eggNOG-mapper	UHGV-0447089_23	1423807.BACO01000050_gene1454	72.4	0.000000000000259	N/A	N/A
Pfam	UHGV-0447089_23	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0447089_23	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_24	phrog_5702	80.6	8.8e-24	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0447089_24	UniRef90_A0A373SNE0	209.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0447089_24	1410670.JHXF01000015_gene2271	140.0	3.60974e-42	VRR_NUC	N/A
Pfam	UHGV-0447089_24	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0447089_24	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-0447089_25	K19789	323.7	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0447089_25	phrog_16	279.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0447089_25	UniRef90_A0A356CZA9	897.0	0	Helicase	N/A
eggNOG-mapper	UHGV-0447089_25	1410670.JHXF01000015_gene2270	590.0	0	helicase	N/A
PADLOC	UHGV-0447089_25	mREase_IV_00005	107.0	4e-32	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0447089_25	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0447089_25	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0447089_25	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0447089_25	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_26	phrog_2872	246.3	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0447089_26	UniRef90_A0A373VPJ3	398.0	0	ATP-binding protein (Fragment)	N/A
eggNOG-mapper	UHGV-0447089_26	754027.HMPREF9554_00709	219.0	0	N/A	N/A
Pfam	UHGV-0447089_26	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0447089_26	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_27	phrog_253	114.0	1.1e-33	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0447089_27	UniRef90_UPI0019171ADA	119.0	9.65e-31	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0447089_27	881621.LIV_2167	75.5	0.0000000000000084	Siphovirus Gp157	N/A
Pfam	UHGV-0447089_27	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0447089_27	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_28	phrog_15609	80.8	7.7e-24	N/A	unknown function
UniRef90	UHGV-0447089_28	UniRef90_A0A373SLQ6	438.0	0	N/A	N/A
eggNOG-mapper	UHGV-0447089_28	641112.ACOK01000073_gene2872	108.0	3.48e-25	N/A	N/A
structural_annotation	UHGV-0447089_28	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_29	phrog_8470	193.5	0	N/A	unknown function
UniRef90	UHGV-0447089_29	UniRef90_UPI0019175B9C	311.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0447089_29	641112.ACOK01000073_gene2870	404.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0447089_29	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0447089_29	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_30	phrog_38338	105.5	4.3e-31	N/A	unknown function
UniRef90	UHGV-0447089_30	UniRef90_UPI00137B3A8C	90.5	1.77e-20	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0447089_30	693746.OBV_25410	85.1	1.11e-19	N/A	N/A
structural_annotation	UHGV-0447089_35	PF01775,MF_00273,NF010188	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_38	phrog_750	74.9	7.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0447089_38	742723.HMPREF9477_00931	100.0	3.14e-26	N/A	N/A
structural_annotation	UHGV-0447089_38	PF13835,NF040858	N/A	N/A	N/A	N/A
UniRef90	UHGV-0447089_40	UniRef90_A0A373VPI4	137.0	2.97005e-41	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0447089_40	1292035.H476_1036	54.7	0.00000000423	N/A	N/A
structural_annotation	UHGV-0447089_40	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0447089_41	K01356	153.4	2.8026e-45	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0447089_41	phrog_4	120.5	1.7e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-0447089_41	UniRef90_A0A373VMR3	343.0	0	Repressor LexA	N/A
eggNOG-mapper	UHGV-0447089_41	411473.RUMCAL_03095	209.0	0	N/A	N/A
Pfam	UHGV-0447089_41	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
Pfam	UHGV-0447089_41	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0447089_41	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0447089_41	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0447089_43	K06400	357.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0447089_43	phrog_95	353.0	0	integrase	integration and excision
UniRef90	UHGV-0447089_43	UniRef90_A0A3D4JJV8	426.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0447089_43	537013.CLOSTMETH_01697	420.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0447089_43	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0447089_43	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0447089_43	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0447089_43	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0447089_43	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0447089_44	UniRef90_J7IQK4	197.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0447089_44	768704.Desmer_0401	197.0	0	N/A	N/A
KOfam	UHGV-0447089_45	K07273	220.9	0	acm; lysozyme	N/A
PHROG	UHGV-0447089_45	phrog_291	188.7	0	endolysin	lysis
UniRef90	UHGV-0447089_45	UniRef90_A0A1C6IMI8	508.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0447089_45	246199.CUS_5914	300.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0447089_45	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0447089_45	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0447089_45	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0447089_45	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0447089_46	phrog_1863	52.4	6.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0447089_46	1226322.HMPREF1545_04027	72.4	0.00000000000000166	N/A	N/A
PHROG	UHGV-0447089_47	phrog_13256	77.4	1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0447089_47	1160721.RBI_II00522	96.7	7.6e-26	N/A	N/A