UHGV-0574938 (vOTU-069804)

Viral Genome: UHGV-0574938

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0574938
vOTU ID	vOTU-069804
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	ERS743400\|NODE_10_length_49972_cov_35.839874
Associated BioSample	SAMEA3444268
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	96.7 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.98
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.13
Jumbo phage	No

Genome content
Genome length (bp)	49,972
GC content	46.13%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	87
CDS density	90%
Average CDS length (bps)	518.97
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.7)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0574938_3	UniRef90_A0A521SZN7	83.6	8.9e-18	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0574938_3	1123388.AQWU01000067_gene621	80.9	3.67e-17	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
COG	UHGV-0574938_3	COG0328	N/A	N/A	Ribonuclease HI	N/A
PHROG	UHGV-0574938_4	phrog_38	165.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0574938_4	UniRef90_A0A843GZU6	593.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0574938_4	476272.RUMHYD_01940	432.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0574938_4	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0574938_4	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0574938_4	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_6	phrog_64	203.7	0	portal protein	head and packaging
UniRef90	UHGV-0574938_6	UniRef90_A0A845RCM8	419.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0574938_6	1123263.AUKY01000015_gene1609	318.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0574938_6	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0574938_6	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_7	phrog_115	53.8	8.7e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0574938_7	278197.PEPE_0506	64.3	0.000000000496	Phage Mu protein F like protein	N/A
Pfam	UHGV-0574938_7	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0574938_7	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-0574938_7	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_10	phrog_29	197.4	0	major head protein	head and packaging
UniRef90	UHGV-0574938_10	UniRef90_A0A2Z4QBB4	367.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-0574938_10	1232453.BAIF02000058_gene1628	249.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0574938_10	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0574938_10	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0574938_12	UniRef90_UPI001D07B1DB	104.0	4.9e-27	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0574938_12	1298920.KI911353_gene2658	57.0	0.00000000364	N/A	N/A
structural_annotation	UHGV-0574938_12	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0574938_13	1298920.KI911353_gene2656	76.3	6.38e-16	N/A	N/A
eggNOG-mapper	UHGV-0574938_15	469596.HMPREF9488_01309	50.1	0.00000597	N/A	N/A
structural_annotation	UHGV-0574938_15	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0574938_16	UniRef90_UPI001A9B3C90	91.3	1.07e-20	phage tail protein	N/A
structural_annotation	UHGV-0574938_16	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0574938_17	1211844.CBLM010000023_gene988	59.3	0.000000000775	N/A	N/A
Pfam	UHGV-0574938_17	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0574938_17	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0574938_18	1121333.JMLH01000047_gene1011	68.6	0.00000000000121	N/A	N/A
PHROG	UHGV-0574938_19	phrog_1535	70.1	2.1e-20	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0574938_19	1123263.AUKY01000015_gene1620	112.0	1.83e-22	Phage tail tape measure protein TP901	N/A
COG	UHGV-0574938_19	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0574938_20	phrog_1194	83.3	2.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-0574938_20	1122919.KB905559_gene1345	54.3	0.000000105	N/A	N/A
Pfam	UHGV-0574938_20	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0574938_20	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_21	phrog_6616	98.6	5e-29	tail protein	tail
eggNOG-mapper	UHGV-0574938_21	97138.C820_00743	86.7	0.0000000000000182	Fibronectin type 3 domain	N/A
COG	UHGV-0574938_21	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0574938_23	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_24	phrog_13589	45.8	3.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0574938_24	411471.SUBVAR_06929	269.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0574938_24	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0574938_26	phrog_4105	97.2	1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0574938_26	397288.C806_00056	92.8	4.9e-23	N/A	N/A
KOfam	UHGV-0574938_27	K19304	97.1	2.1e-28	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0574938_27	phrog_7767	93.0	1.9e-27	metallo-endopeptidase	other
UniRef90	UHGV-0574938_27	UniRef90_A0A1E1VI95	80.5	0.000000000000109	Muramidase	N/A
eggNOG-mapper	UHGV-0574938_27	1158601.I585_02846	97.8	5.15e-19	Peptidase family M23	N/A
Pfam	UHGV-0574938_27	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0574938_27	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0574938_27	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0574938_27	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0574938_29	1122921.KB898212_gene2740	55.1	0.0000000165	N/A	N/A
structural_annotation	UHGV-0574938_32	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0574938_34	UniRef90_A0A7M1RTM1	63.5	0.00000000225	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0574938_34	1378168.N510_03079	97.1	2.57e-22	N/A	N/A
PHROG	UHGV-0574938_35	phrog_4402	157.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0574938_35	UniRef90_A0A3A9E5A5	190.0	0	RepB family plasmid replication initiator protein	N/A
eggNOG-mapper	UHGV-0574938_35	1395513.P343_18240	168.0	0	Protein involved in initiation of plasmid replication	N/A
Pfam	UHGV-0574938_35	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0574938_35	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0574938_35	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0574938_35	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0574938_36	PF20063,NF033787	N/A	N/A	N/A	N/A
KOfam	UHGV-0574938_38	K03111	125.3	7.6e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0574938_38	phrog_44	123.3	2e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0574938_38	UniRef90_A0A7C6GL00	152.0	5.60519e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0574938_38	1232443.BAIA02000073_gene513	120.0	3.68e-33	Single-strand binding protein family	N/A
Pfam	UHGV-0574938_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0574938_38	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0574938_38	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0574938_38	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0574938_38	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_40	phrog_474	79.7	6.5e-23	phosphofructokinase	other
UniRef90	UHGV-0574938_40	UniRef90_UPI00195F5FF7	91.7	5.91e-22	N/A	N/A
eggNOG-mapper	UHGV-0574938_40	1095750.HMPREF9970_1026	75.9	1.5e-16	N/A	N/A
Pfam	UHGV-0574938_40	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0574938_40	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-0574938_41	K01160	45.6	0.0000000000019	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0574938_41	phrog_4632	47.1	0.00000000000004	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0574938_41	UniRef90_A0A1V5ZUM0	110.0	9.27e-29	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0574938_41	556263.FSEG_00477	68.9	0.000000000000226	N/A	N/A
structural_annotation	UHGV-0574938_41	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0574938_51	K07451	64.0	2.2e-18	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0574938_51	phrog_1271	70.7	3e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0574938_51	UniRef90_UPI001A90E773	118.0	9.61e-30	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0574938_51	1158609.I586_02595	114.0	3.75e-29	HNH nucleases	N/A
Pfam	UHGV-0574938_51	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0574938_51	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0574938_51	PF01844,NF008448,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_52	phrog_7314	50.4	0.000000000000035	N/A	unknown function
structural_annotation	UHGV-0574938_53	PF06289,COG1582	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_54	phrog_9300	40.7	0.000000000026	N/A	unknown function
structural_annotation	UHGV-0574938_57	PF18129,NF000331	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_59	phrog_15946	63.2	4.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0574938_59	1041147.AUFB01000014_gene330	68.6	0.00000000000807	N/A	N/A
PHROG	UHGV-0574938_60	phrog_4652	100.3	7.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-0574938_60	397290.C810_01459	206.0	0	N/A	N/A
structural_annotation	UHGV-0574938_60	TIGR02582	N/A	N/A	N/A	N/A
KOfam	UHGV-0574938_61	K01520	140.5	1.29998e-41	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0574938_61	phrog_135	122.9	2e-36	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0574938_61	UniRef90_R6ILQ3	150.0	2.8026e-44	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-0574938_61	1282887.AUJG01000016_gene1113	149.0	2.84464e-43	N/A	N/A
Pfam	UHGV-0574938_61	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0574938_61	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0574938_61	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0574938_61	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_68	phrog_9804	107.5	1.2e-31	N/A	unknown function
UniRef90	UHGV-0574938_68	UniRef90_R6LQQ5	118.0	4.64e-30	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0574938_68	1499683.CCFF01000013_gene503	83.6	2.51e-17	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0574938_68	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0574938_68	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_69	phrog_270	84.7	1.2e-24	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0574938_69	1423724.BAMM01000020_gene1808	75.9	0.000000000000496	N/A	N/A
COG	UHGV-0574938_69	COG3756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0574938_69	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_71	phrog_2760	172.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0574938_71	UniRef90_UPI0019154C91	204.0	0	phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0574938_71	1122173.AXVL01000068_gene1414	184.0	0	DNA synthesis involved in double-strand break repair via homologous recombination	N/A
Pfam	UHGV-0574938_71	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0574938_71	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0574938_71	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0574938_71	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
Pfam	UHGV-0574938_72	PF07083	N/A	N/A	N/A	DUF1351
KOfam	UHGV-0574938_74	K07741	200.5	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0574938_74	phrog_63	166.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0574938_74	UniRef90_UPI000E507582	315.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0574938_74	445971.ANASTE_00706	315.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0574938_74	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0574938_74	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0574938_74	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0574938_74	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0574938_76	K22300	46.0	0.000000000001	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0574938_76	phrog_2967	42.1	0.000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0574938_76	UniRef90_UPI00156FD326	97.4	1.31e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0574938_76	903814.ELI_3237	92.0	3.11e-22	sequence-specific DNA binding	N/A
Pfam	UHGV-0574938_76	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0574938_76	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0574938_76	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0574938_79	UniRef90_UPI001898C5AD	90.5	1.51e-18	stalk domain-containing protein	N/A
eggNOG-mapper	UHGV-0574938_79	411467.BACCAP_02394	77.8	0.0000000000000251	Peptidase propeptide and YPEB domain	N/A
Pfam	UHGV-0574938_79	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
COG	UHGV-0574938_79	COG3212	N/A	N/A	PepSY domain containing protein, regulator of zincin peptidase activity	N/A
structural_annotation	UHGV-0574938_79	PF07705,COG5633	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0574938_80	596152.DesU5LDRAFT_1910	85.9	5.48e-18	N/A	N/A
structural_annotation	UHGV-0574938_80	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0574938_81	phrog_25567	45.8	0.0000000000008	N/A	unknown function
eggNOG-mapper	UHGV-0574938_81	888727.HMPREF9092_1413	52.8	0.000000166	Helix-turn-helix	N/A
COG	UHGV-0574938_81	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0574938_81	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0574938_85	PF19129,NF007348,COG5569	N/A	N/A	N/A	N/A
UniRef90	UHGV-0574938_87	UniRef90_A0A6H1ZT64	62.8	0.000000022	LPD29 domain-containing protein	N/A
COG	UHGV-0574938_87	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A