UHGV-0618402 (vOTU-132250)

Viral Genome: UHGV-0618402

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0618402
vOTU ID	vOTU-132250
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	ERS743400\|NODE_16_length_36665_cov_25.215706
Associated BioSample	SAMEA3444268
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.91 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9765
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.52
Jumbo phage	No

Genome content
Genome length (bp)	36,665
GC content	49.60%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	93%
Average CDS length (bps)	567.90
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0618402_1	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-0618402_5	K03111	130.6	1.8e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0618402_5	phrog_44	118.7	1.8e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0618402_5	UniRef90_A0A7C6GL00	150.0	1.69557e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0618402_5	203119.Cthe_1350	114.0	2.19e-30	Single-strand binding protein family	N/A
Pfam	UHGV-0618402_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0618402_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0618402_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0618402_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0618402_5	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_6	phrog_4632	51.3	7.1e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0618402_6	UniRef90_A0A7X8IB41	114.0	2.19e-30	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0618402_6	556263.FSEG_00477	68.2	0.000000000000511	N/A	N/A
structural_annotation	UHGV-0618402_6	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_7	phrog_474	96.7	3.7e-28	phosphofructokinase	other
UniRef90	UHGV-0618402_7	UniRef90_A0A3E2XXK5	92.4	4.14e-22	N/A	N/A
eggNOG-mapper	UHGV-0618402_7	1203606.HMPREF1526_00237	71.6	0.0000000000000132	N/A	N/A
Pfam	UHGV-0618402_7	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0618402_7	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-0618402_9	K01520	132.6	3e-39	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0618402_9	phrog_135	124.0	8.6e-37	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0618402_9	UniRef90_A0A3D3Y5Q7	150.0	3.22299e-44	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0618402_9	1282887.AUJG01000016_gene1113	141.0	3.19e-40	N/A	N/A
Pfam	UHGV-0618402_9	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0618402_9	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0618402_9	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0618402_9	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_12	phrog_924	43.0	0.0000000000027	N/A	unknown function
Pfam	UHGV-0618402_12	PF04448	N/A	N/A	N/A	DUF551
UniRef90	UHGV-0618402_22	UniRef90_A0A0A7I2M5	71.2	0.0000000000000739	Peptidase U32	N/A
PHROG	UHGV-0618402_23	phrog_7711	109.9	1.5e-32	N/A	unknown function
UniRef90	UHGV-0618402_23	UniRef90_UPI001C38CAD2	106.0	5.8e-26	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0618402_23	1304866.K413DRAFT_1204	125.0	7.13e-35	N/A	N/A
KOfam	UHGV-0618402_26	K02315	156.9	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0618402_26	phrog_50	145.6	3.09687e-43	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0618402_26	UniRef90_R6WX70	190.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0618402_26	203119.Cthe_2467	181.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0618402_26	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0618402_26	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0618402_26	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0618402_26	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_27	phrog_428	113.0	4.4e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0618402_27	UniRef90_UPI000BB17A8D	73.2	0.0000000000833	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0618402_27	372457.A7DYC7_9CAUD	99.4	6.79e-21	calcium ion binding	N/A
Pfam	UHGV-0618402_27	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0618402_27	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
PHROG	UHGV-0618402_28	phrog_72	59.4	4.6e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0618402_28	UniRef90_A0A8D9PDS2	163.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0618402_28	445972.ANACOL_01825	139.0	2.38e-39	N/A	N/A
structural_annotation	UHGV-0618402_28	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_29	phrog_2205	108.9	3e-32	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0618402_29	UniRef90_A0A1T4YHV2	73.2	0.000000000000653	Bacteriophage Mu Gam like protein	N/A
eggNOG-mapper	UHGV-0618402_29	1519439.JPJG01000051_gene723	72.0	0.000000000000517	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-0618402_29	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
structural_annotation	UHGV-0618402_29	PF07352	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_31	phrog_14970	240.5	0	N/A	unknown function
UniRef90	UHGV-0618402_31	UniRef90_UPI00164BFA28	214.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0618402_31	697329.Rumal_1121	189.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0618402_31	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0618402_31	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
KOfam	UHGV-0618402_39	K22300	62.4	9.5e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0618402_39	phrog_4	48.8	0.00000000000017	transcriptional repressor	transcription regulation
UniRef90	UHGV-0618402_39	UniRef90_R9K5V7	97.8	6.58e-24	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0618402_39	397290.C810_05152	97.8	1.1e-24	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0618402_39	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0618402_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0618402_39	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0618402_40	K22300	75.9	6.7e-22	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0618402_40	phrog_8	61.3	2.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0618402_40	UniRef90_UPI0008FFE4D1	62.4	0.000000000342	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0618402_40	1346.DQ08_00565	56.6	0.0000000221	sequence-specific DNA binding	N/A
Pfam	UHGV-0618402_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0618402_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0618402_40	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_45	phrog_3292	50.2	0.000000000000038	N/A	unknown function
UniRef90	UHGV-0618402_45	UniRef90_A0A520II94	59.7	0.000000000887	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0618402_45	1117319.PSPO_09654	65.1	0.0000000000733	KTSC domain	N/A
Pfam	UHGV-0618402_45	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0618402_45	COG1190	N/A	N/A	Lysyl-tRNA synthetase (class II)	N/A
structural_annotation	UHGV-0618402_45	PF13619	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0618402_46	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_47	phrog_16123	76.8	2.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0618402_47	1273103.NM10_00919	82.8	1.01e-17	N/A	N/A
PHROG	UHGV-0618402_48	phrog_606	46.6	0.0000000000005	terminase small subunit	head and packaging
UniRef90	UHGV-0618402_48	UniRef90_UPI001D02F64C	82.4	5.32e-17	DNA-packaging protein	N/A
structural_annotation	UHGV-0618402_48	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0618402_49	K06909	287.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0618402_49	phrog_3717	198.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0618402_49	UniRef90_UPI001C30E6F9	434.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0618402_49	696281.Desru_1088	414.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0618402_49	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0618402_49	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0618402_49	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0618402_49	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_52	phrog_156	108.5	5.9e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-0618402_52	588581.Cpap_1526	281.0	0	N/A	N/A
structural_annotation	UHGV-0618402_52	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_54	phrog_14242	96.2	2.3e-28	major head protein	head and packaging
UniRef90	UHGV-0618402_54	UniRef90_A0A3D2CI53	324.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0618402_54	935948.KE386495_gene2267	62.8	0.0000000703	N/A	N/A
NCBIFam	UHGV-0618402_54	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0618402_54	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0618402_56	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0618402_57	1449126.JQKL01000002_gene1688	95.1	3.65e-18	N/A	N/A
structural_annotation	UHGV-0618402_57	PF11134,NF038128,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0618402_60	phrog_3904	43.4	0.0000000000000038	tail fiber protein	tail
eggNOG-mapper	UHGV-0618402_60	1429768.W6AS29_9CAUD	61.2	0.000000555	N-acetylmuramoyl-L-alanine amidase activity	N/A
structural_annotation	UHGV-0618402_60	PF10651	N/A	N/A	N/A	N/A