UHGV-0663121 (vOTU-099108)

Viral Genome: UHGV-0663121

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0663121
vOTU ID	vOTU-099108
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	ERS743425\|NODE_8_length_27971_cov_9.724208
Associated BioSample	SAMEA3444293
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9788
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	34.18
Jumbo phage	No

Genome content
Genome length (bp)	27,971
GC content	41.76%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	29
CDS density	94%
Average CDS length (bps)	906.72
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0663121_1	phrog_7688	112.7	2.6e-33	N/A	unknown function
UniRef90	UHGV-0663121_1	UniRef90_UPI0009416DD2	141.0	1.46e-37	serine protease	N/A
eggNOG-mapper	UHGV-0663121_1	478749.BRYFOR_07572	129.0	5.39e-34	Belongs to the peptidase S1B family	N/A
COG	UHGV-0663121_1	COG3591	N/A	N/A	V8-like Glu-specific endopeptidase	N/A
KOfam	UHGV-0663121_4	K18830	59.3	8.6e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0663121_4	phrog_2967	59.5	6.4e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0663121_4	UniRef90_A0A3D3U8U0	236.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0663121_4	97139.C824_05937	69.7	0.000000000000161	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0663121_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0663121_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0663121_4	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0663121_5	K23779	44.1	0.0000000000044	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
UniRef90	UHGV-0663121_5	UniRef90_A0A416ZS29	85.1	1.59e-20	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0663121_5	1280698.AUJS01000007_gene1001	72.0	4.18e-16	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0663121_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0663121_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0663121_6	K07449	116.9	7.4e-35	K07449; similar to archaeal holliday junction resolvase and Mrr protein	N/A
UniRef90	UHGV-0663121_6	UniRef90_A0A3D3U9W3	889.0	0	Mrr_cat domain-containing protein	N/A
eggNOG-mapper	UHGV-0663121_6	1235790.C805_00010	152.0	2.02e-40	Restriction endonuclease	N/A
PADLOC	UHGV-0663121_6	ZorD1_00005	66.3	4.4e-19	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0663121_6	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-0663121_6	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0663121_6	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
KOfam	UHGV-0663121_7	K06400	282.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0663121_7	phrog_95	294.7	0	integrase	integration and excision
UniRef90	UHGV-0663121_7	UniRef90_R7FBT6	412.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0663121_7	33035.JPJF01000109_gene439	395.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0663121_7	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0663121_7	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0663121_7	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0663121_7	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0663121_8	K01448	44.0	0.0000000000024	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0663121_8	phrog_1794	67.9	2.1e-19	amidase	lysis
UniRef90	UHGV-0663121_8	UniRef90_A0A416MN83	456.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0663121_8	1408437.JNJN01000039_gene391	114.0	1.9e-26	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0663121_8	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0663121_8	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0663121_8	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0663121_8	PF01520,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_9	phrog_199	67.8	1.3e-19	holin	lysis
UniRef90	UHGV-0663121_9	UniRef90_A0A3D3UA08	268.0	0	Holin	N/A
eggNOG-mapper	UHGV-0663121_9	742723.HMPREF9477_00889	214.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0663121_9	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0663121_9	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0663121_9	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0663121_9	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0663121_10	457412.RSAG_01112	87.8	0.00000000000000768	N/A	N/A
PHROG	UHGV-0663121_11	phrog_16164	235.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0663121_11	457412.RSAG_01113	78.6	0.0000000000000127	N/A	N/A
structural_annotation	UHGV-0663121_11	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_12	phrog_372	212.9	0	tail protein	tail
UniRef90	UHGV-0663121_12	UniRef90_UPI001373A0FD	164.0	5.71e-40	N/A	N/A
eggNOG-mapper	UHGV-0663121_12	35344.A0A097PAT0_BPT12	131.0	1.94e-29	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0663121_12	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0663121_12	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_13	phrog_6616	496.0	0	tail protein	tail
UniRef90	UHGV-0663121_13	UniRef90_A0A3D3U8S7	800.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0663121_13	33035.JPJF01000043_gene1002	321.0	0	N/A	N/A
PHROG	UHGV-0663121_14	phrog_1194	48.1	0.00000000000018	N/A	unknown function
structural_annotation	UHGV-0663121_14	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0663121_15	K03529	41.0	0.0000000000082	smc; chromosome segregation protein	N/A
PHROG	UHGV-0663121_15	phrog_1535	233.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0663121_15	UniRef90_A0A1C5N853	192.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0663121_15	411459.RUMOBE_01384	253.0	0	phage tail tape measure protein	N/A
COG	UHGV-0663121_15	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0663121_15	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_16	phrog_706	128.2	6.1e-38	N/A	unknown function
UniRef90	UHGV-0663121_16	UniRef90_A0A1C5M8I2	223.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0663121_16	476272.RUMHYD_01784	181.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0663121_16	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0663121_16	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_17	phrog_11299	104.9	7.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0663121_17	33035.JPJF01000106_gene3125	87.4	4.16e-20	N/A	N/A
structural_annotation	UHGV-0663121_17	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_18	phrog_3099	118.4	5.4e-35	N/A	unknown function
eggNOG-mapper	UHGV-0663121_18	411902.CLOBOL_00129	154.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0663121_18	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_19	phrog_3266	110.3	1e-32	tail completion	connector
eggNOG-mapper	UHGV-0663121_19	663278.Ethha_0098	65.9	0.0000000000129	N/A	N/A
structural_annotation	UHGV-0663121_19	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_20	phrog_556	59.0	6.9e-17	minor head protein	head and packaging
UniRef90	UHGV-0663121_20	UniRef90_UPI000930E2B9	132.0	5.77e-37	minor capsid protein	N/A
eggNOG-mapper	UHGV-0663121_20	411461.DORFOR_01170	117.0	6.92e-32	Minor capsid protein	N/A
Pfam	UHGV-0663121_20	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0663121_20	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_21	phrog_3366	90.3	2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0663121_21	742765.HMPREF9457_02129	52.0	0.00000154	N/A	N/A
Pfam	UHGV-0663121_21	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0663121_21	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_22	phrog_541	86.0	3.5e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0663121_22	658655.HMPREF0988_02559	50.1	0.00000624	N/A	N/A
PHROG	UHGV-0663121_23	phrog_10	181.4	0	major head protein	head and packaging
UniRef90	UHGV-0663121_23	UniRef90_UPI00157128C8	609.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0663121_23	411461.DORFOR_00744	532.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-0663121_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0663121_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0663121_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0663121_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_24	phrog_2303	98.7	7.3e-29	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0663121_24	411462.DORLON_00787	177.0	0	N/A	N/A
structural_annotation	UHGV-0663121_24	PF10788,MF_02110	N/A	N/A	N/A	N/A
KOfam	UHGV-0663121_25	K07584	64.8	1.7e-18	N/A	N/A
PHROG	UHGV-0663121_25	phrog_4478	81.5	7.1e-24	peptidase	other
UniRef90	UHGV-0663121_25	UniRef90_UPI00156D7F8B	160.0	0	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0663121_25	411461.DORFOR_00746	117.0	2.34e-33	Pfam:Peptidase_C108	N/A
Pfam	UHGV-0663121_25	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0663121_25	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0663121_25	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_26	phrog_15041	112.8	9.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-0663121_26	1304866.K413DRAFT_0808	48.9	0.00000126	N/A	N/A
structural_annotation	UHGV-0663121_26	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_27	phrog_581	313.7	0	minor head protein	head and packaging
UniRef90	UHGV-0663121_27	UniRef90_A0A3D3U8R6	948.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0663121_27	1235799.C818_04219	373.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0663121_27	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0663121_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0663121_27	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0663121_28	phrog_533	404.7	0	portal protein	head and packaging
UniRef90	UHGV-0663121_28	UniRef90_UPI001897501E	861.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0663121_28	411461.DORFOR_00749	649.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-0663121_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0663121_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0663121_29	K06909	113.0	3.4e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0663121_29	phrog_10250	98.8	4.5e-29	N/A	unknown function
UniRef90	UHGV-0663121_29	UniRef90_UPI0018985A97	548.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0663121_29	411461.DORFOR_00750	454.0	0	COG COG1783 Phage terminase large subunit	N/A
Pfam	UHGV-0663121_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0663121_29	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0663121_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0663121_29	PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A