UHGV-0774149 (vOTU-033121)

Viral Genome: UHGV-0774149

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0774149
vOTU ID	vOTU-033121
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	SRS1713184\|NODE_59_length_30245_cov_13.435012
Associated BioSample	SAMN04415499
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	88.83 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9776
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.86
Jumbo phage	No

Genome content
Genome length (bp)	30,245
GC content	52.45%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	93%
Average CDS length (bps)	574.90
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0774149_1	phrog_361	69.6	5e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0774149_1	UniRef90_A0A1C6H6I9	200.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0774149_1	1329516.JPST01000017_gene431	50.4	0.00000312	Phage terminase, small subunit	N/A
Pfam	UHGV-0774149_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0774149_1	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0774149_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_2	phrog_9	292.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0774149_2	UniRef90_A0A0D8IV16	1058.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0774149_2	1226322.HMPREF1545_00113	930.0	0	Phage Terminase	N/A
Pfam	UHGV-0774149_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0774149_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0774149_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0774149_2	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_3	phrog_12	182.1	0	portal protein	head and packaging
UniRef90	UHGV-0774149_3	UniRef90_A0A0D8IVL0	541.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0774149_3	1226322.HMPREF1545_00114	475.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0774149_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0774149_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0774149_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0774149_3	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0774149_4	K06904	149.6	2.52234e-44	N/A	N/A
PHROG	UHGV-0774149_4	phrog_80	170.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0774149_4	UniRef90_U2SBX0	294.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-0774149_4	1226322.HMPREF1545_00115	294.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0774149_4	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0774149_4	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0774149_4	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0774149_4	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_5	phrog_10	203.4	0	major head protein	head and packaging
UniRef90	UHGV-0774149_5	UniRef90_UPI000679B959	704.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0774149_5	1226322.HMPREF1545_00116	613.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0774149_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0774149_5	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0774149_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0774149_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0774149_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_6	phrog_2550	75.1	5e-22	N/A	unknown function
UniRef90	UHGV-0774149_6	UniRef90_R5V091	90.5	7.4e-22	Phage related protein	N/A
eggNOG-mapper	UHGV-0774149_6	1226322.HMPREF1545_00117	100.0	1.95e-26	N/A	N/A
structural_annotation	UHGV-0774149_6	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_7	phrog_19734	91.0	1.3e-26	N/A	unknown function
UniRef90	UHGV-0774149_7	UniRef90_A0A3R6AW46	101.0	2.16e-25	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0774149_7	1235798.C817_04587	97.4	1.09e-24	N/A	N/A
structural_annotation	UHGV-0774149_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0774149_8	1232446.BAIE02000002_gene829	72.4	7.25e-16	N/A	N/A
PHROG	UHGV-0774149_9	phrog_5	50.1	0.000000000000064	tail completion or Neck1 protein	connector
UniRef90	UHGV-0774149_9	UniRef90_A0A1C6FG30	154.0	5.60519e-45	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0774149_9	908340.HMPREF9406_2573	129.0	5.46e-36	N/A	N/A
structural_annotation	UHGV-0774149_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_10	phrog_88	87.0	2e-25	major tail protein	tail
UniRef90	UHGV-0774149_10	UniRef90_UPI0018771F27	144.0	5.76e-40	phage tail protein	N/A
eggNOG-mapper	UHGV-0774149_10	1195236.CTER_5106	70.1	0.00000000000317	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0774149_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0774149_10	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0774149_10	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_12	phrog_58	96.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0774149_12	UniRef90_A0A2L0D4W7	213.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0774149_12	1160721.RBI_II00528	217.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0774149_12	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-0774149_12	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_13	phrog_33	75.0	1.6e-21	distal tail protein Dit	tail
UniRef90	UHGV-0774149_13	UniRef90_A0A173Z1X4	213.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0774149_13	1160721.RBI_I01575	156.0	1.96182e-44	Phage tail protein	N/A
COG	UHGV-0774149_13	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0774149_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_14	phrog_1067	385.3	0	minor head protein	head and packaging
UniRef90	UHGV-0774149_14	UniRef90_A0A1C6H6B4	627.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0774149_14	1160721.RBI_I01574	403.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0774149_14	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0774149_14	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0774149_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0774149_14	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_15	phrog_1980	64.0	2.3e-18	tail fiber protein	tail
eggNOG-mapper	UHGV-0774149_15	1313421.JHBV01000029_gene1883	69.7	0.000000000757	manually curated	N/A
Pfam	UHGV-0774149_15	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0774149_15	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0774149_15	COG0018	N/A	N/A	Arginyl-tRNA synthetase	N/A
KOfam	UHGV-0774149_16	K07273	203.7	0	acm; lysozyme	N/A
PHROG	UHGV-0774149_16	phrog_291	151.7	5.60519e-45	endolysin	lysis
UniRef90	UHGV-0774149_16	UniRef90_UPI00164A97A0	552.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0774149_16	1408312.JNJS01000008_gene633	157.0	1.49e-40	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0774149_16	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0774149_16	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0774149_16	PF01183,PF05194,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_17	phrog_419	93.8	2.2e-27	N/A	unknown function
UniRef90	UHGV-0774149_17	UniRef90_A0A0P0N9Y5	117.0	1.09e-32	Phage-associated protein	N/A
eggNOG-mapper	UHGV-0774149_17	1123304.AQYA01000037_gene221	117.0	1.58e-33	N/A	N/A
structural_annotation	UHGV-0774149_17	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_18	phrog_937	49.2	0.000000000000046	hemolysin	other
PHROG	UHGV-0774149_19	phrog_20258	110.1	8.7e-33	N/A	unknown function
eggNOG-mapper	UHGV-0774149_19	665956.HMPREF1032_02710	140.0	2.86005e-42	N/A	N/A
KOfam	UHGV-0774149_20	K14059	98.0	1.5e-28	int; integrase	N/A
PHROG	UHGV-0774149_20	phrog_1	109.4	4.2e-32	integrase	integration and excision
UniRef90	UHGV-0774149_20	UniRef90_UPI0011C8F252	320.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0774149_20	1007096.BAGW01000023_gene159	232.0	0	Phage integrase family	N/A
Pfam	UHGV-0774149_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0774149_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0774149_20	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0774149_21	K07339	62.1	8.4e-18	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0774149_21	phrog_353	86.3	1.8e-25	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0774149_21	UniRef90_A0A1Q6T334	120.0	1.29e-34	Toxin HicA	N/A
eggNOG-mapper	UHGV-0774149_21	478749.BRYFOR_07601	89.0	6.94e-23	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0774149_21	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0774149_21	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0774149_21	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0774149_22	K18843	69.5	7e-20	hicB; antitoxin HicB	N/A
PHROG	UHGV-0774149_22	phrog_497	73.7	3.6e-21	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0774149_22	UniRef90_A0A329TU28	192.0	0	HicB family protein	N/A
eggNOG-mapper	UHGV-0774149_22	657322.FPR_23750	192.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0774149_22	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0774149_22	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0774149_22	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-0774149_24	K22300	56.3	7.3e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0774149_24	phrog_4	44.1	0.0000000000043	transcriptional repressor	transcription regulation
UniRef90	UHGV-0774149_24	UniRef90_A0A1C5N467	163.0	0	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0774149_24	411471.SUBVAR_05818	142.0	2.93992e-42	sequence-specific DNA binding	N/A
Pfam	UHGV-0774149_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0774149_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0774149_24	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_27	phrog_25245	138.2	3.20001e-41	N/A	unknown function
UniRef90	UHGV-0774149_27	UniRef90_UPI001A9B205E	226.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0774149_27	657322.FPR_26620	152.0	7.00649e-45	3D domain	N/A
Pfam	UHGV-0774149_27	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0774149_27	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0774149_27	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0774149_28	1235835.C814_01169	121.0	2.71e-32	N/A	N/A
COG	UHGV-0774149_28	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0774149_29	phrog_30822	43.2	0.0000000000047	N/A	unknown function
UniRef90	UHGV-0774149_29	UniRef90_UPI00164AA766	66.2	0.0000000000106	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0774149_29	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0774149_29	PF01381,PF13613,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0774149_32	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_34	phrog_14970	208.3	0	N/A	unknown function
UniRef90	UHGV-0774149_34	UniRef90_UPI00123F00F5	198.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0774149_34	1122981.AUME01000026_gene555	171.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0774149_34	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0774149_34	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0774149_34	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_35	phrog_72	69.4	3.4e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0774149_35	UniRef90_UPI000C7BF263	229.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0774149_35	445972.ANACOL_01825	132.0	5.78e-37	N/A	N/A
structural_annotation	UHGV-0774149_35	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_36	phrog_7566	75.0	7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0774149_36	693746.OBV_25470	65.5	0.00000000000269	N/A	N/A
KOfam	UHGV-0774149_37	K03111	141.8	7.19987e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0774149_37	phrog_44	139.6	1.90002e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0774149_37	UniRef90_UPI000C7C4D36	180.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0774149_37	1105031.HMPREF1141_2832	146.0	3.29305e-43	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0774149_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0774149_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0774149_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0774149_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0774149_37	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_38	phrog_15768	88.3	9.80909e-45	N/A	unknown function
UniRef90	UHGV-0774149_38	UniRef90_UPI00189C2664	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0774149_38	203119.Cthe_2466	97.1	2.35e-21	N/A	N/A
AcrCatalog	UHGV-0774149_38	cluster_38323	125.0	9.56e-38	NA	N/A
Pfam	UHGV-0774149_38	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0774149_38	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0774149_39	K02314	231.3	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0774149_39	phrog_19	239.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0774149_39	UniRef90_A0A316NVS3	380.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0774149_39	1203606.HMPREF1526_01325	172.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0774149_39	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0774149_39	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0774149_39	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_40	phrog_244	79.0	7.6e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0774149_40	33035.JPJF01000122_gene2460	176.0	0	N/A	N/A
structural_annotation	UHGV-0774149_40	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_45	phrog_8684	83.7	2e-24	N/A	unknown function
UniRef90	UHGV-0774149_45	UniRef90_A0A373MQ88	82.8	1.22e-16	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0774149_45	457412.RSAG_01162	69.3	0.00000000000197	YopX protein	N/A
Pfam	UHGV-0774149_45	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0774149_45	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0774149_46	phrog_374	139.2	3.69999e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0774149_46	UniRef90_I4A6C6	122.0	2.03e-31	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0774149_46	357276.EL88_11255	122.0	5.9e-32	N/A	N/A
PHROG	UHGV-0774149_49	phrog_36	77.1	2.6e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0774149_49	UniRef90_A0A2V2FTX8	74.3	0.0000000000000338	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0774149_49	411471.SUBVAR_05843	79.7	4.39e-17	N/A	N/A
structural_annotation	UHGV-0774149_49	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A