UHGV-0794811 (vOTU-141321)

Viral Genome: UHGV-0794811

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0794811
vOTU ID	vOTU-141321
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	SRS150943\|NODE_3_length_24696_cov_9.355692
Associated BioSample	SAMN00189285
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.79 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	13.3
Jumbo phage	No

Genome content
Genome length (bp)	24,696
GC content	43.57%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	31
CDS density	87%
Average CDS length (bps)	692.42
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0794811_1	K18830	69.3	4.3e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0794811_1	phrog_8	52.5	0.0000000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-0794811_1	UniRef90_A0A2V2D6D5	244.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0794811_1	1235790.C805_00012	120.0	9.8e-34	Helix-turn-helix domain	N/A
PADLOC	UHGV-0794811_1	retron_type_VI_hth_cluster2_1	40.5	0.000000000067	N/A	Retron
Pfam	UHGV-0794811_1	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0794811_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0794811_1	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0794811_3	K07705	130.6	1.3e-38	lytT, lytR; two-component system, LytTR family, response regulator LytT	N/A
PHROG	UHGV-0794811_3	phrog_8810	124.2	1.1e-36	N/A	unknown function
UniRef90	UHGV-0794811_3	UniRef90_UPI001D0E4226	443.0	0	LytTR family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0794811_3	556261.HMPREF0240_03082	131.0	5.48e-35	response regulator	N/A
Pfam	UHGV-0794811_3	PF00072	N/A	N/A	Response regulator receiver domain	Response_reg
Pfam	UHGV-0794811_3	PF04397	N/A	N/A	LytTr DNA-binding domain	LytTR
COG	UHGV-0794811_3	COG3279	N/A	N/A	DNA-binding response regulator, LytR/AlgR family	N/A
structural_annotation	UHGV-0794811_3	PF04397,PF00072,MF_00981,NF010684,COG3279	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_4	phrog_8545	62.7	5.6e-18	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0794811_4	UniRef90_UPI001C0EAFDF	266.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-0794811_4	1304866.K413DRAFT_0836	191.0	0	tRNA_anti-like	N/A
Pfam	UHGV-0794811_4	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0794811_4	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
KOfam	UHGV-0794811_5	K14059	100.7	2.2e-29	int; integrase	N/A
PHROG	UHGV-0794811_5	phrog_1	130.5	1.6e-38	integrase	integration and excision
UniRef90	UHGV-0794811_5	UniRef90_D4LPN8	699.0	0	Phage integrase family	N/A
eggNOG-mapper	UHGV-0794811_5	1235792.C808_05256	366.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0794811_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0794811_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0794811_5	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0794811_6	K07273	175.0	0	acm; lysozyme	N/A
PHROG	UHGV-0794811_6	phrog_6745	187.8	0	endolysin	lysis
UniRef90	UHGV-0794811_6	UniRef90_A0A412SB50	886.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0794811_6	476272.RUMHYD_02876	342.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-0794811_6	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0794811_6	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0794811_6	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0794811_6	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0794811_6	PF01183,PF18342,PF14603,NF040678,TIGR04303,COG3757,COG3807	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_9	phrog_6616	510.4	0	tail protein	tail
UniRef90	UHGV-0794811_9	UniRef90_UPI001D0E203F	1951.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0794811_9	33035.JPJF01000043_gene1002	262.0	0	N/A	N/A
Pfam	UHGV-0794811_9	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0794811_9	PF05113,PF18432,NF033848,NF011735,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0794811_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_11	phrog_1535	440.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0794811_11	UniRef90_A0A173R880	493.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0794811_11	476272.RUMHYD_01785	498.0	0	phage tail tape measure protein	N/A
COG	UHGV-0794811_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0794811_11	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_12	phrog_706	133.3	1.6e-39	N/A	unknown function
UniRef90	UHGV-0794811_12	UniRef90_UPI001BAD00AD	205.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0794811_12	411459.RUMOBE_01383	338.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0794811_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0794811_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_15	phrog_3099	133.3	1.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0794811_15	411902.CLOBOL_00129	168.0	0	N/A	N/A
structural_annotation	UHGV-0794811_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_16	phrog_3266	91.9	5.3e-27	tail completion	connector
eggNOG-mapper	UHGV-0794811_16	476272.RUMHYD_01781	149.0	1.26117e-43	N/A	N/A
structural_annotation	UHGV-0794811_16	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_17	phrog_556	63.4	2.8e-18	minor head protein	head and packaging
UniRef90	UHGV-0794811_17	UniRef90_UPI000E4989EB	303.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0794811_17	476272.RUMHYD_01780	169.0	0	N/A	N/A
Pfam	UHGV-0794811_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0794811_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_18	phrog_3366	102.1	4.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-0794811_18	476272.RUMHYD_01779	155.0	0	N/A	N/A
structural_annotation	UHGV-0794811_18	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_19	phrog_1129	76.3	2.6e-22	holin	lysis
UniRef90	UHGV-0794811_19	UniRef90_A0A395X7B2	173.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0794811_19	411461.DORFOR_00721	114.0	3.57e-32	N/A	N/A
Pfam	UHGV-0794811_19	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0794811_19	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_20	phrog_419	100.8	1.5e-29	N/A	unknown function
UniRef90	UHGV-0794811_20	UniRef90_A0A4U9RIR3	122.0	5.1e-34	N/A	N/A
eggNOG-mapper	UHGV-0794811_20	476272.RUMHYD_03324	124.0	6.35e-36	N/A	N/A
structural_annotation	UHGV-0794811_20	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_21	phrog_541	93.0	1.7e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0794811_21	476272.RUMHYD_01778	96.3	5.96e-23	N/A	N/A
PHROG	UHGV-0794811_22	phrog_544	163.6	0	major head protein	head and packaging
UniRef90	UHGV-0794811_22	UniRef90_A0A395X7A1	737.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0794811_22	1232453.BAIF02000011_gene3359	383.0	0	N/A	N/A
Pfam	UHGV-0794811_22	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0794811_22	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_23	phrog_194	65.1	1.3e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0794811_23	UniRef90_UPI001D14C9C8	196.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0794811_23	476272.RUMHYD_01775	197.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0794811_23	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0794811_24	phrog_28802	224.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0794811_24	476272.RUMHYD_01772	197.0	0	N/A	N/A
PHROG	UHGV-0794811_25	phrog_20016	207.3	0	N/A	unknown function
UniRef90	UHGV-0794811_25	UniRef90_A0A285PT46	168.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0794811_25	397290.C810_05214	187.0	0	N/A	N/A
structural_annotation	UHGV-0794811_25	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0794811_26	phrog_16490	191.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0794811_26	397290.C810_01328	191.0	0	N/A	N/A
PHROG	UHGV-0794811_27	phrog_22984	93.0	1.9e-27	N/A	unknown function
PHROG	UHGV-0794811_28	phrog_21718	133.3	1e-39	N/A	unknown function
eggNOG-mapper	UHGV-0794811_28	476272.RUMHYD_01768	131.0	3.97e-37	N/A	N/A
UniRef90	UHGV-0794811_29	UniRef90_A0A395X7A4	182.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0794811_29	476272.RUMHYD_01766	121.0	1.52e-34	N/A	N/A
PHROG	UHGV-0794811_30	phrog_3754	108.6	4.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0794811_30	476272.RUMHYD_01764	179.0	0	N/A	N/A
PHROG	UHGV-0794811_31	phrog_581	86.9	2.5e-25	minor head protein	head and packaging
UniRef90	UHGV-0794811_31	UniRef90_D2XPY3	55.1	0.000000849	Gp4-like protein	N/A
eggNOG-mapper	UHGV-0794811_31	1125725.HMPREF1325_1324	74.7	0.000000000000198	Phage minor capsid protein 2	N/A
Pfam	UHGV-0794811_31	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0794811_31	COG2369	N/A	N/A	N/A	N/A