UHGV-0807936 (vOTU-113813)

Viral Genome: UHGV-0807936

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0807936
vOTU ID	vOTU-113813
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	ERS795779\|NODE_1_length_30067_cov_52.113794
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	73.41 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.977
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.06
Jumbo phage	No

Genome content
Genome length (bp)	30,067
GC content	52.84%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	92%
Average CDS length (bps)	589.66
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 73.41)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0807936_1	phrog_9	163.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0807936_1	UniRef90_A0A2A7ALT4	690.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0807936_1	610130.Closa_0741	431.0	0	Phage Terminase	N/A
Pfam	UHGV-0807936_1	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0807936_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0807936_1	PF20441,MF_04147,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_2	phrog_12	125.7	3.4e-37	portal protein	head and packaging
UniRef90	UHGV-0807936_2	UniRef90_A0A2A7B6S8	556.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0807936_2	349161.Dred_2606	263.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0807936_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0807936_2	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0807936_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0807936_2	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0807936_3	K01358	71.2	1.8e-20	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0807936_3	phrog_94	125.3	6.9e-37	head maturation protease	head and packaging
UniRef90	UHGV-0807936_3	UniRef90_UPI001C0ECD60	133.0	1.33e-34	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0807936_3	1232452.BAIB02000007_gene1626	124.0	6.41e-32	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0807936_3	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0807936_3	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0807936_3	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_4	phrog_10	131.4	5.4e-39	major head protein	head and packaging
UniRef90	UHGV-0807936_4	UniRef90_A0A2A7B712	718.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0807936_4	1235792.C808_00086	454.0	0	Phage capsid family	N/A
Pfam	UHGV-0807936_4	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0807936_4	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0807936_4	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0807936_4	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0807936_4	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_5	phrog_749	59.8	4.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0807936_5	1211817.CCAT010000053_gene2133	65.9	0.0000000000014	N/A	N/A
PHROG	UHGV-0807936_6	phrog_19734	94.8	7e-28	N/A	unknown function
UniRef90	UHGV-0807936_6	UniRef90_A0A0D8I708	80.9	5.02e-17	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0807936_6	349161.Dred_2602	75.9	7.34e-16	N/A	N/A
structural_annotation	UHGV-0807936_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0807936_7	999413.HMPREF1094_02005	72.8	0.00000000000000311	N/A	N/A
structural_annotation	UHGV-0807936_7	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_8	phrog_5	49.4	0.000000000000076	tail completion or Neck1 protein	connector
UniRef90	UHGV-0807936_8	UniRef90_A0A1C6FG30	131.0	1.04e-35	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0807936_8	908340.HMPREF9406_2573	110.0	2.84e-28	N/A	N/A
structural_annotation	UHGV-0807936_8	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_9	phrog_88	93.3	2.6e-27	major tail protein	tail
UniRef90	UHGV-0807936_9	UniRef90_G9YSC5	108.0	3.19e-26	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0807936_9	33035.JPJF01000039_gene278	73.6	0.000000000000201	N/A	N/A
NCBIFam	UHGV-0807936_9	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0807936_9	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_12	phrog_9959	97.7	6.8e-29	tail length tape measure protein	tail
UniRef90	UHGV-0807936_12	UniRef90_A0A2A7ALS3	730.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0807936_12	1224164.B843_03450	178.0	6.12367e-43	Tail protein	N/A
Pfam	UHGV-0807936_12	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0807936_12	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0807936_12	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0807936_12	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_13	phrog_33	78.5	1.4e-22	distal tail protein Dit	tail
UniRef90	UHGV-0807936_13	UniRef90_A0A173Z1X4	141.0	5.46e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-0807936_13	1487921.DP68_11370	92.4	6.81e-20	tail component	N/A
NCBIFam	UHGV-0807936_13	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0807936_13	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0807936_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_14	phrog_1067	171.9	0	minor head protein	head and packaging
UniRef90	UHGV-0807936_14	UniRef90_A0A2A7AM44	716.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0807936_14	1123263.AUKY01000068_gene489	196.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0807936_14	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0807936_14	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0807936_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0807936_14	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0807936_16	PF05096,MF_03141,NF035926,COG3823	N/A	N/A	N/A	N/A
KOfam	UHGV-0807936_17	K07273	165.0	0	acm; lysozyme	N/A
PHROG	UHGV-0807936_17	phrog_291	129.7	2.7e-38	endolysin	lysis
UniRef90	UHGV-0807936_17	UniRef90_UPI001D0EE7D8	301.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0807936_17	748224.HMPREF9436_00154	278.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0807936_17	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0807936_17	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0807936_17	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_19	phrog_15303	83.1	2.4e-24	N/A	unknown function
structural_annotation	UHGV-0807936_21	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0807936_23	K23779	51.1	0.000000000000029	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0807936_23	phrog_8	40.7	0.000000000032	transcriptional regulator	transcription regulation
Pfam	UHGV-0807936_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0807936_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0807936_23	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_26	phrog_22984	54.4	0.0000000000000017	N/A	unknown function
PHROG	UHGV-0807936_27	phrog_16490	55.0	0.0000000000000017	N/A	unknown function
structural_annotation	UHGV-0807936_28	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0807936_29	1378168.N510_03079	88.6	5.69e-19	N/A	N/A
KOfam	UHGV-0807936_30	K14059	181.2	0	int; integrase	N/A
PHROG	UHGV-0807936_30	phrog_1	164.3	0	integrase	integration and excision
UniRef90	UHGV-0807936_30	UniRef90_A0A367GI93	222.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0807936_30	1507.HMPREF0262_00307	160.0	9.711e-43	Phage integrase family	N/A
Pfam	UHGV-0807936_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0807936_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0807936_30	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_31	phrog_1373	41.3	0.000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0807936_31	UniRef90_A0A2A7AM70	186.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0807936_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0807936_31	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0807936_31	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0807936_34	K02342	80.7	1.7e-23	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0807936_34	phrog_192	90.1	2.1e-26	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0807936_34	UniRef90_UPI001EE95DBE	82.8	0.0000000000000462	3'-5' exoribonuclease	N/A
eggNOG-mapper	UHGV-0807936_34	665956.HMPREF1032_02791	123.0	1.99e-28	N/A	N/A
PADLOC	UHGV-0807936_34	cd06127	73.7	5.2e-21	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0807936_34	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0807936_34	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0807936_34	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0807936_34	PF13361,PF00533,MF_00157,NF008746,COG2925	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0807936_35	PF06776,COG5342	N/A	N/A	N/A	N/A
PHROG	UHGV-0807936_36	phrog_8	49.8	0.000000000000074	transcriptional regulator	transcription regulation
UniRef90	UHGV-0807936_36	UniRef90_A0A2A7AM72	90.9	1.42e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0807936_36	1378168.N510_01712	72.8	0.0000000000000437	N/A	N/A
Pfam	UHGV-0807936_36	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0807936_36	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0807936_37	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0807936_43	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A