UHGV-0828468 (vOTU-129862)

Viral Genome: UHGV-0828468

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0828468
vOTU ID	vOTU-129862
Representative Genome?	Yes
Source	HuVirDB
Original genome ID	SRS2267585\|NODE_33_length_18930_cov_9.020980
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.99 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9803
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.6
Jumbo phage	No

Genome content
Genome length (bp)	18,930
GC content	50.18%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	26
CDS density	94%
Average CDS length (bps)	685.27
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.99)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0828468_1	K01448	130.8	1.3e-38	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0828468_1	phrog_435	142.3	4.1002e-42	endolysin	lysis
UniRef90	UHGV-0828468_1	UniRef90_A0A1C6B3W5	272.0	0	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0828468_1	1410668.JNKC01000001_gene1675	142.0	2.35e-38	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0828468_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0828468_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0828468_1	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_3	phrog_1129	75.6	3.9e-22	holin	lysis
UniRef90	UHGV-0828468_3	UniRef90_A0A1C7FPV3	123.0	7.63e-35	Enolase	N/A
eggNOG-mapper	UHGV-0828468_3	693746.OBV_13280	119.0	4.53e-34	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0828468_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0828468_3	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_4	phrog_1863	67.5	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0828468_4	748224.HMPREF9436_01412	105.0	3.45e-29	N/A	N/A
UniRef90	UHGV-0828468_5	UniRef90_A0A8J6J965	67.4	0.000000000000073	XkdX family protein	N/A
Pfam	UHGV-0828468_5	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
eggNOG-mapper	UHGV-0828468_6	1519439.JPJG01000060_gene1895	92.4	5.31e-21	N/A	N/A
structural_annotation	UHGV-0828468_6	PF10618	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_9	phrog_13589	51.8	1.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-0828468_9	411471.SUBVAR_06929	330.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0828468_9	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-0828468_10	1297617.JPJD01000099_gene2171	75.1	0.000000000000529	Collagen triple helix repeat protein	N/A
COG	UHGV-0828468_10	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-0828468_10	PF10651,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_12	phrog_32744	600.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0828468_12	1120998.AUFC01000030_gene2247	247.0	0	N/A	N/A
structural_annotation	UHGV-0828468_12	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_13	phrog_1194	45.2	0.0000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0828468_13	1120998.AUFC01000030_gene2246	92.4	4.89e-21	N/A	N/A
PHROG	UHGV-0828468_14	phrog_23464	520.2	0	N/A	unknown function
UniRef90	UHGV-0828468_14	UniRef90_A0A7X5ECT4	95.9	3.48e-18	Phage tail tape measure protein (Fragment)	N/A
eggNOG-mapper	UHGV-0828468_14	1226322.HMPREF1545_00124	478.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0828468_14	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0828468_14	PF20155,TIGR02971,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_15	phrog_3033	69.3	4.2e-20	N/A	unknown function
UniRef90	UHGV-0828468_15	UniRef90_D9R5H0	64.3	0.00000000000142	Phage-like protein	N/A
eggNOG-mapper	UHGV-0828468_15	1226322.HMPREF1545_00123	77.4	1.54e-18	N/A	N/A
PHROG	UHGV-0828468_16	phrog_709	102.4	2.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-0828468_16	1226322.HMPREF1545_00122	141.0	5.84061e-42	N/A	N/A
structural_annotation	UHGV-0828468_16	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_17	phrog_88	174.5	0	major tail protein	tail
UniRef90	UHGV-0828468_17	UniRef90_U2R3I9	306.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0828468_17	1226322.HMPREF1545_00121	306.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0828468_17	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0828468_17	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_18	phrog_78	41.2	0.00000000003	tail terminator	connector
UniRef90	UHGV-0828468_18	UniRef90_U2SBX3	164.0	0	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0828468_18	1226322.HMPREF1545_00120	164.0	0	N/A	N/A
structural_annotation	UHGV-0828468_18	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_19	phrog_5	50.1	0.000000000000072	tail completion or Neck1 protein	connector
UniRef90	UHGV-0828468_19	UniRef90_A0A4R1R500	110.0	1.16e-28	Bacteriophage HK97-gp10 putative tail-component	N/A
eggNOG-mapper	UHGV-0828468_19	1226322.HMPREF1545_00119	124.0	7.08e-35	N/A	N/A
Pfam	UHGV-0828468_19	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0828468_19	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_20	phrog_1951	95.8	2.6e-28	head-tail adaptor	connector
UniRef90	UHGV-0828468_20	UniRef90_U2R2J1	130.0	4.28e-37	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0828468_20	1226322.HMPREF1545_00118	130.0	7.18e-38	N/A	N/A
structural_annotation	UHGV-0828468_20	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_21	phrog_10	200.3	0	major head protein	head and packaging
UniRef90	UHGV-0828468_21	UniRef90_A0A1C6H720	703.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0828468_21	1226322.HMPREF1545_00116	667.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0828468_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0828468_21	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0828468_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0828468_21	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0828468_21	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0828468_23	K06904	147.9	8.54792e-44	N/A	N/A
PHROG	UHGV-0828468_23	phrog_80	180.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0828468_23	UniRef90_A0A1F2PDD9	251.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0828468_23	398512.JQKC01000009_gene450	235.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0828468_23	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0828468_23	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0828468_23	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0828468_23	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_24	phrog_12	174.4	0	portal protein	head and packaging
UniRef90	UHGV-0828468_24	UniRef90_U2SKC6	590.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0828468_24	1226322.HMPREF1545_00114	590.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0828468_24	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0828468_24	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0828468_24	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0828468_24	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_25	phrog_9	312.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0828468_25	UniRef90_A0A316NLJ1	1013.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0828468_25	1226322.HMPREF1545_00113	924.0	0	Phage Terminase	N/A
Pfam	UHGV-0828468_25	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0828468_25	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0828468_25	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0828468_25	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0828468_26	phrog_361	81.8	8.4e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0828468_26	UniRef90_A0A1C6H6I9	160.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0828468_26	1145276.T479_19995	59.7	0.000000000926	Phage terminase, small subunit	N/A
Pfam	UHGV-0828468_26	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0828468_26	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0828468_26	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A