UHGV-1279724 (vOTU-112140)

Viral Genome: UHGV-1279724

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1279724
vOTU ID	vOTU-112140
Representative Genome?	Yes
Source	GVD
Original genome ID	Kang_0013_ST001_A_NODE_147_length_23925_cov_28.888102
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.48 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.981
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.29
Jumbo phage	No

Genome content
Genome length (bp)	23,925
GC content	54.26%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	39
CDS density	96%
Average CDS length (bps)	589.31
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1279724_1	phrog_309	186.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-1279724_1	UniRef90_A0A1C7FRC2	279.0	0	Transposase	N/A
eggNOG-mapper	UHGV-1279724_1	1408437.JNJN01000045_gene597	187.0	0	HNH endonuclease	N/A
Pfam	UHGV-1279724_1	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-1279724_1	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1279724_1	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-1279724_2	K06909	117.0	2e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1279724_2	phrog_10250	142.0	3.09967e-42	N/A	unknown function
UniRef90	UHGV-1279724_2	UniRef90_UPI0018A99FCF	558.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1279724_2	476272.RUMHYD_01756	382.0	0	N/A	N/A
Pfam	UHGV-1279724_2	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1279724_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1279724_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1279724_2	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_3	phrog_64	150.2	7.00649e-45	portal protein	head and packaging
UniRef90	UHGV-1279724_3	UniRef90_UPI0018A8A301	770.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1279724_3	673376.F2VHW1_9CAUD	219.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1279724_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1279724_3	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_5	phrog_2468	117.6	3.1e-35	head morphogenesis	head and packaging
UniRef90	UHGV-1279724_5	UniRef90_A0A1C7FSE6	813.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1279724_5	1504822.CCNO01000013_gene286	176.0	0	cell adhesion	N/A
Pfam	UHGV-1279724_5	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1279724_5	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1279724_5	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1279724_5	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
UniRef90	UHGV-1279724_6	UniRef90_R6QRM6	51.2	0.000000798	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1279724_6	1121335.Clst_0388	51.6	0.0000000668	N/A	N/A
PHROG	UHGV-1279724_7	phrog_5	83.4	3.5e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-1279724_7	UniRef90_UPI0018AA0B5A	261.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1279724_7	1280685.AUKC01000004_gene1630	116.0	1.14e-31	N/A	N/A
Pfam	UHGV-1279724_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1279724_7	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1279724_7	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1279724_9	UniRef90_A0A6B9SU02	117.0	2.69e-29	Fibronectin autolysin	N/A
structural_annotation	UHGV-1279724_9	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_10	phrog_544	118.7	5.8e-35	major head protein	head and packaging
UniRef90	UHGV-1279724_10	UniRef90_A0A395X7A1	330.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1279724_10	476272.RUMHYD_01776	312.0	0	N/A	N/A
structural_annotation	UHGV-1279724_10	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1279724_11	1226322.HMPREF1545_00051	189.0	0	N/A	N/A
PHROG	UHGV-1279724_13	phrog_17977	87.3	1.2e-25	N/A	unknown function
UniRef90	UHGV-1279724_13	UniRef90_UPI00141211AB	116.0	2.46e-31	head-tail adaptor protein	N/A
structural_annotation	UHGV-1279724_13	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1279724_14	UniRef90_A0A415JI88	114.0	1.98e-30	N/A	N/A
structural_annotation	UHGV-1279724_14	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_15	phrog_885	63.6	1.6e-18	major tail protein	tail
UniRef90	UHGV-1279724_15	UniRef90_A0A843J9F0	205.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1279724_15	1504822.CCNO01000012_gene492	229.0	0	N/A	N/A
PHROG	UHGV-1279724_16	phrog_18646	69.3	5.5e-20	N/A	unknown function
UniRef90	UHGV-1279724_16	UniRef90_B6CXF0	85.9	2.8e-19	Peptidase-colicin	N/A
PHROG	UHGV-1279724_18	phrog_23464	281.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1279724_18	665950.HMPREF1025_02660	340.0	0	phage tail tape measure protein	N/A
COG	UHGV-1279724_18	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1279724_18	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_20	phrog_13879	500.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1279724_20	1235797.C816_02659	629.0	0	N/A	N/A
structural_annotation	UHGV-1279724_20	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
KOfam	UHGV-1279724_22	K13276	69.7	1.6e-20	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-1279724_22	phrog_11157	173.3	0	N/A	unknown function
UniRef90	UHGV-1279724_22	UniRef90_UPI001C10C6DC	201.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1279724_22	1304866.K413DRAFT_0771	183.0	0	N/A	N/A
Pfam	UHGV-1279724_22	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-1279724_22	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
NCBIFam	UHGV-1279724_22	NF033510.3	N/A	N/A	Ca2+-stabilized repeat-containing adhesin	N/A
COG	UHGV-1279724_22	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1279724_22	PF09136,PF13750,MF_04116,NF032891,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_25	phrog_863	42.0	0.00000000001	tail fiber assembly	tail
Pfam	UHGV-1279724_25	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-1279724_25	PF13620,NF040788,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_27	phrog_134	41.3	0.000000000018	N/A	unknown function
UniRef90	UHGV-1279724_27	UniRef90_A0A316P7R3	54.7	0.00000000558	XkdX family protein	N/A
Pfam	UHGV-1279724_27	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-1279724_27	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
PHROG	UHGV-1279724_28	phrog_523	64.8	4.1e-19	tail collar fiber protein	tail
UniRef90	UHGV-1279724_28	UniRef90_A0A8A7KFC0	90.9	1.38e-18	Collar domain-containing protein	N/A
eggNOG-mapper	UHGV-1279724_28	556268.OFAG_00905	72.0	0.00000000000153	Phage Tail Collar Domain	N/A
Pfam	UHGV-1279724_28	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-1279724_28	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1279724_30	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-1279724_32	K01447	112.9	4e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1279724_32	phrog_1794	114.2	1.5e-33	amidase	lysis
UniRef90	UHGV-1279724_32	UniRef90_UPI001959DDD2	339.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1279724_32	97138.C820_00588	189.0	0	Ami_2	N/A
Pfam	UHGV-1279724_32	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1279724_32	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1279724_32	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_33	phrog_1129	78.7	4.8e-23	holin	lysis
UniRef90	UHGV-1279724_33	UniRef90_A0A1C7FPV3	160.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1279724_33	1226322.HMPREF1545_00069	142.0	2.18603e-43	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1279724_33	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1279724_33	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1279724_34	1408437.JNJN01000040_gene192	97.4	7.08e-25	N/A	N/A
UniRef90	UHGV-1279724_35	UniRef90_U2R3E6	68.6	0.000000000000129	KORA domain-containing protein	N/A
structural_annotation	UHGV-1279724_35	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1279724_37	phrog_3754	100.0	9e-30	N/A	unknown function
eggNOG-mapper	UHGV-1279724_37	1226322.HMPREF1545_00073	217.0	0	N/A	N/A
PHROG	UHGV-1279724_38	phrog_21718	114.2	9.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-1279724_38	397290.C810_05210	97.8	1.23e-23	N/A	N/A
PHROG	UHGV-1279724_39	phrog_22984	110.2	9.5e-33	N/A	unknown function