UHGV-1314207 (vOTU-093292)

Viral Genome: UHGV-1314207

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1314207
vOTU ID	vOTU-093292
Representative Genome?	Yes
Source	GVD
Original genome ID	Han_2018_ERR1398253_NODE_723_length_33287_cov_5.670589
Associated BioSample	SAMEA3951619
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.97 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9795
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.08
Jumbo phage	No

Genome content
Genome length (bp)	33,287
GC content	37.71%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	88%
Average CDS length (bps)	572.35
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1314207_1	397290.C810_01353	140.0	1.65e-40	N/A	N/A
structural_annotation	UHGV-1314207_1	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-1314207_11	UniRef90_UPI0011072322	74.3	0.00000000000000814	N/A	N/A
eggNOG-mapper	UHGV-1314207_11	1256908.HMPREF0373_00479	68.6	0.000000000000228	N/A	N/A
structural_annotation	UHGV-1314207_11	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_12	phrog_38	154.4	1.4013e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1314207_12	UniRef90_UPI001D009E65	1040.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1314207_12	1121866.AUGK01000003_gene1428	230.0	0	chromosome segregation	N/A
NCBIFam	UHGV-1314207_12	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1314207_12	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1314207_12	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_13	phrog_36	75.0	1.2e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1314207_13	UniRef90_A0A352SH29	108.0	2.58e-28	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1314207_13	97138.C820_00772	80.9	1.5e-17	sigma factor activity	N/A
COG	UHGV-1314207_13	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1314207_13	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_14	phrog_64	180.0	0	portal protein	head and packaging
UniRef90	UHGV-1314207_14	UniRef90_R6CA99	781.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1314207_14	1298920.KI911353_gene2663	451.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1314207_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1314207_14	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1314207_15	UniRef90_R6C0B6	119.0	1.54e-30	Phage capsid scaffolding protein	N/A
eggNOG-mapper	UHGV-1314207_15	1298920.KI911353_gene2662	52.4	0.00000959	N/A	N/A
PHROG	UHGV-1314207_16	phrog_909	56.1	6.7e-16	major head protein	head and packaging
eggNOG-mapper	UHGV-1314207_16	1298920.KI911353_gene2661	142.0	1.33964e-42	N/A	N/A
PHROG	UHGV-1314207_17	phrog_29	179.1	0	major head protein	head and packaging
UniRef90	UHGV-1314207_17	UniRef90_UPI001D02C54B	542.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1314207_17	1298920.KI911353_gene2660	368.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1314207_17	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1314207_17	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1314207_18	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1314207_19	397290.C810_01402	53.5	0.0000002	N/A	N/A
PHROG	UHGV-1314207_20	phrog_4105	91.7	6.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1314207_20	97139.C824_05951	159.0	0	N/A	N/A
PHROG	UHGV-1314207_21	phrog_1129	74.7	8.8e-22	holin	lysis
UniRef90	UHGV-1314207_21	UniRef90_A0A8D9UII9	152.0	0	Holin	N/A
eggNOG-mapper	UHGV-1314207_21	411461.DORFOR_00721	105.0	7.7e-29	N/A	N/A
Pfam	UHGV-1314207_21	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1314207_21	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1314207_22	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_23	phrog_1233	82.6	5.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-1314207_23	411490.ANACAC_00786	79.7	1.78e-17	N/A	N/A
PHROG	UHGV-1314207_24	phrog_5	40.7	0.000000000048	tail completion or Neck1 protein	connector
UniRef90	UHGV-1314207_24	UniRef90_UPI001BBD4500	153.0	1.96182e-44	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1314207_24	397290.C810_01411	195.0	0	N/A	N/A
structural_annotation	UHGV-1314207_24	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1314207_25	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1314207_26	476272.RUMHYD_01968	185.0	0	N/A	N/A
structural_annotation	UHGV-1314207_26	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-1314207_29	K07273	183.0	0	acm; lysozyme	N/A
PHROG	UHGV-1314207_29	phrog_291	150.9	1.12104e-44	endolysin	lysis
UniRef90	UHGV-1314207_29	UniRef90_UPI001D05F2B6	375.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-1314207_29	1235800.C819_00458	217.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1314207_29	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1314207_29	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1314207_29	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1314207_29	PF01183,PF01471,MF_02227,NF007360,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_30	phrog_37543	230.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1314207_30	411902.CLOBOL_00126	119.0	3.71e-24	N/A	N/A
COG	UHGV-1314207_30	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1314207_31	phrog_806	84.7	1.1e-24	N/A	unknown function
UniRef90	UHGV-1314207_31	UniRef90_A0A173T618	253.0	0	Telomeric repeat-binding factor 2	N/A
eggNOG-mapper	UHGV-1314207_31	1235802.C823_04880	184.0	0	N/A	N/A
Pfam	UHGV-1314207_31	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1314207_31	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1314207_32	1304866.K413DRAFT_0769	64.7	0.00000000000881	N/A	N/A
PHROG	UHGV-1314207_33	phrog_1194	57.2	3.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-1314207_33	585501.HMPREF6123_0824	87.8	1.29e-20	N/A	N/A
structural_annotation	UHGV-1314207_33	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_34	phrog_13879	312.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1314207_34	742740.HMPREF9474_03516	604.0	0	N/A	N/A
structural_annotation	UHGV-1314207_34	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_35	phrog_18725	59.1	8.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1314207_35	1235800.C819_00473	79.0	0.00000000000000376	N/A	N/A
structural_annotation	UHGV-1314207_35	PF19077	N/A	N/A	N/A	N/A
KOfam	UHGV-1314207_36	K13276	60.7	1.2e-17	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-1314207_36	phrog_11157	212.1	0	N/A	unknown function
UniRef90	UHGV-1314207_36	UniRef90_D3ABG9	317.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-1314207_36	1304866.K413DRAFT_0771	298.0	0	N/A	N/A
Pfam	UHGV-1314207_36	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-1314207_36	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-1314207_36	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1314207_36	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1314207_38	1304866.K413DRAFT_0769	57.8	0.000000157	N/A	N/A
UniRef90	UHGV-1314207_39	UniRef90_A0A417WCN8	132.0	1.73e-34	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-1314207_39	1235799.C818_04237	200.0	0	N/A	N/A
structural_annotation	UHGV-1314207_39	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-1314207_41	K22300	41.1	0.000000000036	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1314207_41	phrog_2967	47.1	0.00000000000041	transcriptional regulator	transcription regulation
UniRef90	UHGV-1314207_41	UniRef90_UPI001D029144	177.0	0	transcriptional regulator	N/A
eggNOG-mapper	UHGV-1314207_41	457412.RSAG_00795	112.0	5.04e-30	sequence-specific DNA binding	N/A
Pfam	UHGV-1314207_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1314207_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1314207_41	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1314207_42	UniRef90_UPI001D0090A6	131.0	1.09e-38	N/A	N/A
eggNOG-mapper	UHGV-1314207_42	411470.RUMGNA_03231	101.0	2.17e-27	N/A	N/A
Pfam	UHGV-1314207_42	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-1314207_42	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1314207_42	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_43	phrog_2657	141.6	1.10002e-42	transcriptional regulator	transcription regulation
UniRef90	UHGV-1314207_43	UniRef90_A0A0V8QIX1	268.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1314207_43	411470.RUMGNA_03232	246.0	0	N/A	N/A
Pfam	UHGV-1314207_43	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1314207_43	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1314207_43	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1314207_43	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-1314207_45	K07741	193.7	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1314207_45	phrog_63	170.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1314207_45	UniRef90_UPI001C00DDF6	353.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1314207_45	658655.HMPREF0988_02592	317.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1314207_45	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1314207_45	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1314207_45	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1314207_45	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1314207_47	phrog_21026	55.9	8.8e-16	N/A	unknown function
UniRef90	UHGV-1314207_50	UniRef90_A0A1Y4F7C9	51.2	0.0000073	Spo0A_C domain-containing protein	N/A
Pfam	UHGV-1314207_50	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
structural_annotation	UHGV-1314207_50	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-1314207_51	K03111	48.2	0.000000000000034	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1314207_51	phrog_26861	85.1	8.9e-26	N/A	unknown function
UniRef90	UHGV-1314207_51	UniRef90_A0A359IM83	117.0	2.16e-29	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1314207_51	PF00436	N/A	N/A	Single-strand binding protein family	SSB
structural_annotation	UHGV-1314207_51	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A