UHGV-1331896 (vOTU-060373)

Viral Genome: UHGV-1331896

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1331896
vOTU ID	vOTU-060373
Representative Genome?	Yes
Source	GVD
Original genome ID	Kang_0065_ST002_N_NODE_11_length_53648_cov_61.776351
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9821
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.54
Jumbo phage	No

Genome content
Genome length (bp)	53,648
GC content	53.99%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	69
CDS density	95%
Average CDS length (bps)	738.65
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1331896_2	phrog_4973	64.9	1.1e-18	N/A	unknown function
UniRef90	UHGV-1331896_2	UniRef90_A0A3D3Y5F2	154.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1331896_2	584708.Apau_1668	58.5	0.000000000341	Helix-turn-helix domain	N/A
Pfam	UHGV-1331896_2	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1331896_2	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_4	phrog_659	40.9	0.000000000025	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1331896_4	UniRef90_A0A845QLQ8	198.0	0	N/A	N/A
eggNOG-mapper	UHGV-1331896_4	445972.ANACOL_01823	102.0	5.5e-24	N/A	N/A
Pfam	UHGV-1331896_4	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1331896_4	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_5	phrog_434	50.2	0.000000000000037	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1331896_5	UniRef90_B0PAM4	135.0	5.36e-37	YqaJ domain-containing protein	N/A
COG	UHGV-1331896_5	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1331896_5	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1331896_6	UniRef90_A0A8D9PDS2	147.0	7.60064e-42	NinB protein	N/A
eggNOG-mapper	UHGV-1331896_6	445972.ANACOL_01825	127.0	8.28e-35	N/A	N/A
structural_annotation	UHGV-1331896_6	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-1331896_7	UniRef90_A0A3D1LDS4	130.0	7.52e-38	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1331896_7	445972.ANACOL_01826	90.1	1.27e-22	HNH nucleases	N/A
Pfam	UHGV-1331896_7	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-1331896_8	K03111	130.9	1.6e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1331896_8	phrog_44	134.6	6.89999e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1331896_8	UniRef90_R6LLA3	189.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1331896_8	693746.OBV_19910	171.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1331896_8	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1331896_8	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1331896_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1331896_8	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1331896_8	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_9	phrog_9327	94.4	1.6e-28	primosomal protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1331896_9	UniRef90_UPI001126EECF	85.5	2.89e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1331896_9	1449126.JQKL01000003_gene1705	94.7	3.07e-20	ROK family	N/A
COG	UHGV-1331896_9	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-1331896_9	PF07120,COG3756	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1331896_10	1444310.JANV01000162_gene1216	135.0	1.31e-35	N/A	N/A
KOfam	UHGV-1331896_13	K01160	45.1	0.0000000000026	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
UniRef90	UHGV-1331896_13	UniRef90_A0A1V5ZUM0	111.0	4.61e-29	Endodeoxyribonuclease RusA	N/A
structural_annotation	UHGV-1331896_13	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1331896_14	K00571	124.9	8e-37	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1331896_14	phrog_67	100.3	9.2e-30	DNA methyltransferase	other
UniRef90	UHGV-1331896_14	UniRef90_A0A2U1CFM2	425.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1331896_14	658655.HMPREF0988_00878	372.0	0	DNA methylase	N/A
PADLOC	UHGV-1331896_14	MTase_II_00157	91.5	1.6e-26	Type II methyltransferase	RM
Pfam	UHGV-1331896_14	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1331896_14	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1331896_14	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_16	phrog_9298	66.2	3.8e-19	radical SAM domain protein	other
UniRef90	UHGV-1331896_16	UniRef90_D4C6F1	311.0	0	Elp3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1331896_16	742738.HMPREF9460_03770	295.0	0	radical SAM domain protein	N/A
COG	UHGV-1331896_16	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1331896_16	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_17	phrog_924	40.2	0.0000000000018	N/A	unknown function
Pfam	UHGV-1331896_17	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1331896_17	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_19	phrog_38832	89.1	1.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1331896_19	665956.HMPREF1032_03087	99.0	1.73e-24	N/A	N/A
structural_annotation	UHGV-1331896_19	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_22	phrog_31029	64.2	1.6e-18	N/A	unknown function
UniRef90	UHGV-1331896_27	UniRef90_A0A374AB28	177.0	0	Thymidylate synthase ThyX	N/A
eggNOG-mapper	UHGV-1331896_27	935948.KE386495_gene2250	94.0	7.76e-22	N/A	N/A
Pfam	UHGV-1331896_27	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1331896_27	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
KOfam	UHGV-1331896_31	K01520	143.9	1.19951e-42	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1331896_31	phrog_135	116.3	2.2e-34	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1331896_31	UniRef90_A0A3D3Y5Q7	207.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1331896_31	1282887.AUJG01000016_gene1113	140.0	5.72999e-40	N/A	N/A
Pfam	UHGV-1331896_31	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1331896_31	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1331896_31	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1331896_31	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
NCBIFam	UHGV-1331896_33	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1331896_33	PF05263,TIGR01636,COG1595	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1331896_34	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_35	phrog_38	335.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1331896_35	UniRef90_A0A845QMQ7	462.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1331896_35	755731.Clo1100_2438	393.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-1331896_35	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1331896_35	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1331896_35	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1331896_35	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1331896_35	PF17289,PF14623,PF05876,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_37	phrog_156	111.1	7.6e-33	portal protein	head and packaging
eggNOG-mapper	UHGV-1331896_37	693746.OBV_01670	248.0	0	N/A	N/A
structural_annotation	UHGV-1331896_37	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_39	phrog_422	204.4	0	major head protein	head and packaging
UniRef90	UHGV-1331896_39	UniRef90_UPI00124590F3	295.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1331896_39	755731.Clo1100_2434	268.0	0	N/A	N/A
structural_annotation	UHGV-1331896_39	PF19821,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_40	phrog_13046	53.3	0.0000000000000042	N/A	unknown function
structural_annotation	UHGV-1331896_40	PF20387	N/A	N/A	N/A	N/A
UniRef90	UHGV-1331896_41	UniRef90_A0A847CX66	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1331896_41	871968.DESME_08885	133.0	6.93e-30	N/A	N/A
structural_annotation	UHGV-1331896_41	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-1331896_43	K16628	147.4	3.50325e-44	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1331896_43	phrog_6320	81.7	3.60001e-40	tail fiber protein	tail
eggNOG-mapper	UHGV-1331896_43	1519439.JPJG01000060_gene1892	105.0	3.81e-21	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1331896_43	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1331896_43	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1331896_43	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_44	phrog_37900	301.8	0	N/A	unknown function
UniRef90	UHGV-1331896_44	UniRef90_UPI001C3EA4DF	324.0	0	N/A	N/A
eggNOG-mapper	UHGV-1331896_44	552398.HMPREF0866_03098	228.0	0	N/A	N/A
Pfam	UHGV-1331896_44	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1331896_44	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1331896_44	PF19789,PF03785	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_45	phrog_29409	45.7	0.000000000001	N/A	unknown function
UniRef90	UHGV-1331896_45	UniRef90_UPI001A9AA1DC	63.5	0.000000000337	isoaspartyl peptidase	N/A
KOfam	UHGV-1331896_47	K18454	47.3	0.00000000000028	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-1331896_47	phrog_30034	75.1	1.3e-21	N/A	unknown function
UniRef90	UHGV-1331896_47	UniRef90_A0A1C5VT90	143.0	1.92006e-41	Chitinase A1	N/A
eggNOG-mapper	UHGV-1331896_47	1235796.C815_00903	130.0	2.01e-36	N/A	N/A
Pfam	UHGV-1331896_47	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1331896_47	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_48	phrog_937	56.7	4.9e-16	hemolysin	other
eggNOG-mapper	UHGV-1331896_48	1519439.JPJG01000023_gene533	73.2	0.00000000000000126	N/A	N/A
PHROG	UHGV-1331896_50	phrog_355	62.6	6.4e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1331896_50	UniRef90_A0A3E2TS79	130.0	1.48e-37	N/A	N/A
eggNOG-mapper	UHGV-1331896_50	1256908.HMPREF0373_00479	120.0	4.06e-34	N/A	N/A
structural_annotation	UHGV-1331896_50	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_51	phrog_13256	73.2	2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1331896_51	1226322.HMPREF1545_00166	68.2	0.0000000000000367	N/A	N/A
KOfam	UHGV-1331896_52	K01447	112.9	4.1e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1331896_52	phrog_833	119.1	3.7e-35	endolysin	lysis
UniRef90	UHGV-1331896_52	UniRef90_A0A1V5KCB7	256.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-1331896_52	1235802.C823_05611	165.0	0	Ami_2	N/A
Pfam	UHGV-1331896_52	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1331896_52	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1331896_52	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_54	phrog_13543	86.6	1.4e-33	N/A	unknown function
eggNOG-mapper	UHGV-1331896_54	1226322.HMPREF1545_00787	173.0	9.79999e-40	N/A	N/A
Pfam	UHGV-1331896_54	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-1331896_54	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-1331896_54	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
structural_annotation	UHGV-1331896_55	PF16509,MF_00245,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_56	phrog_30113	272.8	0	N/A	unknown function
UniRef90	UHGV-1331896_56	UniRef90_A0A3D3Y6T9	465.0	0	N/A	N/A
eggNOG-mapper	UHGV-1331896_56	77635.BISU_0173	224.0	0	N/A	N/A
Pfam	UHGV-1331896_56	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-1331896_56	PF01351,MF_00052_A,TIGR00729,COG1039	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1331896_59	1408437.JNJN01000043_gene801	79.0	5.43e-16	N/A	N/A
KOfam	UHGV-1331896_60	K14059	165.0	0	int; integrase	N/A
PHROG	UHGV-1331896_60	phrog_1	168.4	0	integrase	integration and excision
UniRef90	UHGV-1331896_60	UniRef90_A0A2Z4QB94	293.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1331896_60	1226322.HMPREF1545_00144	136.0	9.82e-35	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1331896_60	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1331896_60	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1331896_60	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1331896_61	UniRef90_A0A3D3Y4M8	209.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1331896_61	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1331896_61	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1331896_62	phrog_2657	178.4	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1331896_62	UniRef90_A0A3D3Y5M9	565.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1331896_62	428125.CLOLEP_01836	390.0	0	COG NOG08824 non supervised orthologous group	N/A
Pfam	UHGV-1331896_62	PF04383	N/A	N/A	KilA-N domain	KilA-N
structural_annotation	UHGV-1331896_62	PF04383,NF033622,COG3943	N/A	N/A	N/A	N/A
NCBIFam	UHGV-1331896_63	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
PHROG	UHGV-1331896_64	phrog_8	52.6	0.000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1331896_64	UniRef90_UPI000B4ACC78	53.9	0.000000191	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1331896_64	655812.HMPREF0061_0222	50.1	0.00000109	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1331896_64	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1331896_64	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1331896_64	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1331896_66	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1331896_69	1033743.CAES01000078_gene3736	55.1	0.000000566	Flagellar Assembly Protein A	N/A
COG	UHGV-1331896_69	COG1315	N/A	N/A	Flagellar assembly protein FapA, interacts with EIIAGlc	N/A