UHGV-1332274 (vOTU-052859)

Viral Genome: UHGV-1332274

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1332274
vOTU ID	vOTU-052859
Representative Genome?	Yes
Source	GVD
Original genome ID	Norman_77_NODE_9_length_41051_cov_803.817446
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9773
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.67
Jumbo phage	No

Genome content
Genome length (bp)	40,996
GC content	35.73%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	65
CDS density	91%
Average CDS length (bps)	570.83
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1332274_1	K00571	112.9	4e-33	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1332274_1	phrog_67	104.2	8.9e-32	DNA methyltransferase	other
UniRef90	UHGV-1332274_1	UniRef90_UPI0018AB9AB9	501.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1332274_1	1234679.BN424_2638	418.0	0	DNA modification methylase DNA replication, recombination, and repair	N/A
PADLOC	UHGV-1332274_1	MTase_II_00157	94.5	3.7e-28	Type II methyltransferase	RM
Pfam	UHGV-1332274_1	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1332274_1	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1332274_1	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_2	phrog_5781	82.3	6.4e-24	N/A	unknown function
UniRef90	UHGV-1332274_2	UniRef90_A0A417JW41	115.0	9.19e-32	N/A	N/A
eggNOG-mapper	UHGV-1332274_2	754027.HMPREF9554_00001	79.3	4.71e-18	N/A	N/A
Pfam	UHGV-1332274_2	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1332274_2	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1332274_2	PF14359,TIGR02133,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-1332274_4	K13522	72.7	2.7e-21	K13522, nadM; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]	N/A
PHROG	UHGV-1332274_4	phrog_395	64.0	1.4e-18	cytidyltransferase	other
UniRef90	UHGV-1332274_4	UniRef90_A0A372SUR7	389.0	0	CTP_transf_like domain-containing protein	N/A
eggNOG-mapper	UHGV-1332274_4	859657.RPSI07_mp0779	63.5	0.0000000031	Belongs to the Nudix hydrolase family	N/A
Pfam	UHGV-1332274_4	PF01467	N/A	N/A	Cytidylyltransferase-like	CTP_transf_like
NCBIFam	UHGV-1332274_4	TIGR00125.1	N/A	N/A	adenylyltransferase/cytidyltransferase family protein	N/A
COG	UHGV-1332274_4	COG1051	N/A	N/A	ADP-ribose pyrophosphatase YjhB, NUDIX family	N/A
structural_annotation	UHGV-1332274_4	PF08218,MF_00243,NF003789,COG1056	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1332274_5	COG4446	N/A	N/A	N/A	N/A
KOfam	UHGV-1332274_6	K03111	143.6	1.99965e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1332274_6	phrog_44	146.1	1.90577e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1332274_6	UniRef90_A0A4R3TFM5	268.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1332274_6	552396.HMPREF0863_00560	229.0	0	COG COG0629 Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1332274_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1332274_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1332274_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1332274_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1332274_6	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_8	phrog_23707	57.0	3.6e-16	N/A	unknown function
UniRef90	UHGV-1332274_8	UniRef90_A0A351B1S8	65.5	0.00000000000166	Alanine racemase	N/A
eggNOG-mapper	UHGV-1332274_8	552398.HMPREF0866_01624	62.0	0.000000000138	N/A	N/A
eggNOG-mapper	UHGV-1332274_9	428127.EUBDOL_01238	58.2	0.000000000875	N/A	N/A
structural_annotation	UHGV-1332274_12	PF05263,MF_00245,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_16	phrog_940	348.9	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1332274_16	UniRef90_A0A4R3TFN4	681.0	0	ParB-like nuclease family protein	N/A
eggNOG-mapper	UHGV-1332274_16	1232449.BAHV02000018_gene1534	400.0	0	N/A	N/A
PADLOC	UHGV-1332274_16	MTase_II_00015	71.8	2e-21	Type II methyltransferase	RM
Pfam	UHGV-1332274_16	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1332274_16	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1332274_16	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1332274_16	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_17	phrog_9479	154.4	0	N/A	unknown function
structural_annotation	UHGV-1332274_17	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_19	phrog_2412	123.0	1.7e-36	N/A	unknown function
eggNOG-mapper	UHGV-1332274_19	1232449.BAHV02000018_gene1532	157.0	0	N/A	N/A
KOfam	UHGV-1332274_20	K06909	91.8	9e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1332274_20	phrog_2	74.6	2.1e-21	terminase large subunit	head and packaging
UniRef90	UHGV-1332274_20	UniRef90_U5F7S3	902.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1332274_20	552396.HMPREF0863_01628	902.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1332274_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1332274_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1332274_20	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_21	phrog_533	288.0	0	portal protein	head and packaging
UniRef90	UHGV-1332274_21	UniRef90_A0A1C6JYD4	520.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1332274_21	552396.HMPREF0863_01629	974.0	0	N/A	N/A
structural_annotation	UHGV-1332274_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_22	phrog_581	308.4	0	minor head protein	head and packaging
UniRef90	UHGV-1332274_22	UniRef90_A0A4R3TEM7	719.0	0	Minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1332274_22	552396.HMPREF0863_01630	696.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1332274_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1332274_22	PF06152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1332274_24	428127.EUBDOL_01225	52.4	0.0000000345	N/A	N/A
PHROG	UHGV-1332274_25	phrog_2303	149.5	2.24208e-44	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1332274_25	552396.HMPREF0863_01634	344.0	0	N/A	N/A
PHROG	UHGV-1332274_26	phrog_422	318.2	0	major head protein	head and packaging
UniRef90	UHGV-1332274_26	UniRef90_A0A3E2WBR9	432.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1332274_26	552396.HMPREF0863_01635	583.0	0	N/A	N/A
structural_annotation	UHGV-1332274_26	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_27	phrog_1378	60.0	3.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1332274_27	552396.HMPREF0863_01636	97.4	1.84e-25	N/A	N/A
PHROG	UHGV-1332274_28	phrog_541	89.4	3.2e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-1332274_28	552396.HMPREF0863_01637	216.0	0	N/A	N/A
PHROG	UHGV-1332274_29	phrog_8710	99.1	3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1332274_29	552396.HMPREF0863_01638	137.0	2.19001e-40	N/A	N/A
structural_annotation	UHGV-1332274_29	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_30	phrog_556	74.2	1.5e-21	minor head protein	head and packaging
UniRef90	UHGV-1332274_30	UniRef90_UPI000246D598	240.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1332274_30	552396.HMPREF0863_01639	221.0	0	N/A	N/A
Pfam	UHGV-1332274_30	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
PHROG	UHGV-1332274_31	phrog_2595	103.9	1.1e-30	head-tail connector protein	connector
UniRef90	UHGV-1332274_31	UniRef90_UPI001D0A149F	210.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1332274_31	552396.HMPREF0863_01640	248.0	0	N/A	N/A
Pfam	UHGV-1332274_31	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1332274_31	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_32	phrog_820	118.2	4.9e-35	major tail protein	tail
UniRef90	UHGV-1332274_32	UniRef90_A0A7D6ZFT1	202.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1332274_32	552396.HMPREF0863_01641	305.0	0	domain, Protein	N/A
COG	UHGV-1332274_32	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1332274_32	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_33	phrog_8300	84.4	7.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1332274_33	658659.HMPREF0983_03300	88.2	4.37e-21	N/A	N/A
structural_annotation	UHGV-1332274_33	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_34	phrog_8355	118.8	1.1e-35	N/A	unknown function
UniRef90	UHGV-1332274_34	UniRef90_A0A4R3TDU8	167.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1332274_34	552396.HMPREF0863_01643	169.0	0	N/A	N/A
PHROG	UHGV-1332274_35	phrog_37487	498.1	0	N/A	unknown function
UniRef90	UHGV-1332274_35	UniRef90_A0A4R3TDI6	1362.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1332274_35	552396.HMPREF0863_01644	989.0	0	phage tail tape measure protein	N/A
COG	UHGV-1332274_35	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_36	phrog_1194	66.2	4.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1332274_36	552396.HMPREF0863_01645	229.0	0	N/A	N/A
structural_annotation	UHGV-1332274_36	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_37	phrog_1401	62.2	8.2e-18	N/A	unknown function
UniRef90	UHGV-1332274_37	UniRef90_A0A7C6P910	59.3	0.00000000815	N/A	N/A
eggNOG-mapper	UHGV-1332274_37	1262449.CP6013_3212	71.6	0.0000000000000233	N/A	N/A
structural_annotation	UHGV-1332274_37	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_38	phrog_16267	118.7	3.4e-39	N/A	unknown function
UniRef90	UHGV-1332274_38	UniRef90_U5F6T9	1531.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1332274_38	552396.HMPREF0863_01647	1531.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1332274_38	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1332274_38	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1332274_38	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_41	phrog_1863	71.1	8.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-1332274_41	1232449.BAHV02000017_gene1511	64.3	0.00000000000131	N/A	N/A
PHROG	UHGV-1332274_42	phrog_8781	52.0	0.0000000000000089	endolysin	lysis
UniRef90	UHGV-1332274_42	UniRef90_UPI001D099D17	439.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1332274_42	552396.HMPREF0863_01651	420.0	0	lysozyme activity	N/A
Pfam	UHGV-1332274_42	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1332274_42	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1332274_42	PF06940,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_43	phrog_11623	200.7	0	N/A	unknown function
UniRef90	UHGV-1332274_43	UniRef90_UPI0018AA0E0C	550.0	0	N/A	N/A
eggNOG-mapper	UHGV-1332274_43	545696.HOLDEFILI_00066	218.0	0	N/A	N/A
Pfam	UHGV-1332274_43	PF12873	N/A	N/A	N/A	DUF3825
COG	UHGV-1332274_43	COG1278	N/A	N/A	Cold shock protein, CspA family	N/A
structural_annotation	UHGV-1332274_43	PF12873	N/A	N/A	N/A	N/A
KOfam	UHGV-1332274_44	K07699	147.4	8.54792e-44	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
PHROG	UHGV-1332274_44	phrog_37855	112.4	3.2e-33	N/A	unknown function
UniRef90	UHGV-1332274_44	UniRef90_U5F6Y8	193.0	0	Spo0A_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1332274_44	999413.HMPREF1094_00488	120.0	1.75e-33	Sporulation initiation factor Spo0A C terminal	N/A
Pfam	UHGV-1332274_44	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-1332274_44	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-1332274_44	PF08769,TIGR02875	N/A	N/A	N/A	N/A
UniRef90	UHGV-1332274_46	UniRef90_UPI0018A96F5E	108.0	7.37e-30	helix-turn-helix transcriptional regulator	N/A
KOfam	UHGV-1332274_47	K14059	203.7	0	int; integrase	N/A
PHROG	UHGV-1332274_47	phrog_1	191.3	0	integrase	integration and excision
UniRef90	UHGV-1332274_47	UniRef90_A0A318KF09	231.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1332274_47	1232449.BAHV02000006_gene823	226.0	0	Phage integrase family	N/A
Pfam	UHGV-1332274_47	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-1332274_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1332274_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1332274_47	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_48	phrog_888	131.7	1e-39	N/A	unknown function
UniRef90	UHGV-1332274_48	UniRef90_U5F4W5	519.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1332274_48	552396.HMPREF0863_02448	519.0	0	Short C-terminal domain	N/A
Pfam	UHGV-1332274_48	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
KOfam	UHGV-1332274_49	K01356	124.3	1.7e-36	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1332274_49	phrog_4	122.3	4.7e-36	transcriptional repressor	transcription regulation
UniRef90	UHGV-1332274_49	UniRef90_A0A4R3TF60	397.0	0	SOS-response transcriptional repressor LexA	N/A
eggNOG-mapper	UHGV-1332274_49	552396.HMPREF0863_02447	329.0	0	Represses a number of genes involved in the response to DNA damage (SOS response)	N/A
Pfam	UHGV-1332274_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1332274_49	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1332274_49	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1332274_49	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_50	phrog_19236	48.0	0.00000000000025	N/A	unknown function
eggNOG-mapper	UHGV-1332274_50	1158614.I592_00581	49.3	0.000000217	N/A	N/A
structural_annotation	UHGV-1332274_52	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_55	phrog_373	134.6	7.80001e-40	anti-repressor	transcription regulation
UniRef90	UHGV-1332274_55	UniRef90_UPI000246CFB6	464.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1332274_55	1304866.K413DRAFT_3008	206.0	0	Phage regulatory protein	N/A
Pfam	UHGV-1332274_55	PF10543	N/A	N/A	ORF6N domain	ORF6N
Pfam	UHGV-1332274_55	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1332274_55	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1332274_55	PF10552,PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1332274_57	PF10922	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_58	phrog_674	43.0	0.0000000000051	N/A	unknown function
Pfam	UHGV-1332274_58	PF07083	N/A	N/A	N/A	DUF1351
PHROG	UHGV-1332274_59	phrog_155	84.9	1e-24	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1332274_59	UniRef90_UPI0018AC33A4	337.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1332274_59	1497679.EP56_08440	78.6	0.00000000000000862	ERF superfamily	N/A
Pfam	UHGV-1332274_59	PF04404	N/A	N/A	ERF superfamily	ERF
PHROG	UHGV-1332274_60	phrog_7566	102.3	2.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1332274_60	508419.F8J187_9CAUD	124.0	8.19e-36	N/A	N/A
PHROG	UHGV-1332274_61	phrog_72	52.3	0.0000000000000047	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1332274_61	428127.EUBDOL_01246	279.0	0	N/A	N/A
Pfam	UHGV-1332274_61	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-1332274_61	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1332274_63	phrog_1163	252.3	0	N/A	unknown function
UniRef90	UHGV-1332274_63	UniRef90_UPI000246CFAE	530.0	0	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1332274_63	762051.LKI_09560	239.0	0	DnaD domain protein	N/A
Pfam	UHGV-1332274_63	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-1332274_63	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-1332274_63	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1332274_63	PF09681,TIGR01714	N/A	N/A	N/A	N/A