UHGV-1334610 (vOTU-020705)

Viral Genome: UHGV-1334610

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1334610
vOTU ID	vOTU-020705
Representative Genome?	Yes
Source	GVD
Original genome ID	Norman_4_NODE_7_length_28815_cov_12.898505
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.74 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9737
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.26
Jumbo phage	No

Genome content
Genome length (bp)	28,815
GC content	38.09%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	39
CDS density	91%
Average CDS length (bps)	672.23
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 84.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1334610_1	phrog_361	73.5	3.1e-21	terminase small subunit	head and packaging
UniRef90	UHGV-1334610_1	UniRef90_A0A1C6H6I9	186.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1334610_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1334610_1	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1334610_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_2	phrog_9	291.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1334610_2	UniRef90_A0A0D8IV16	1042.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1334610_2	1226322.HMPREF1545_00113	871.0	0	Phage Terminase	N/A
Pfam	UHGV-1334610_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1334610_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1334610_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1334610_2	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_3	phrog_12	163.1	0	portal protein	head and packaging
UniRef90	UHGV-1334610_3	UniRef90_A0A0D8IVL0	566.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1334610_3	1226322.HMPREF1545_00114	471.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1334610_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1334610_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1334610_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1334610_3	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1334610_4	K06904	155.0	0	N/A	N/A
PHROG	UHGV-1334610_4	phrog_80	179.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1334610_4	UniRef90_A0A134AET7	160.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1334610_4	1121423.JONT01000041_gene945	152.0	4.48416e-44	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1334610_4	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1334610_4	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1334610_4	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1334610_4	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_5	phrog_10	162.7	0	major head protein	head and packaging
UniRef90	UHGV-1334610_5	UniRef90_A0A1Y4R494	526.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1334610_5	642492.Clole_0744	355.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1334610_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1334610_5	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1334610_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1334610_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1334610_5	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_6	phrog_2550	83.6	1.3e-24	N/A	unknown function
UniRef90	UHGV-1334610_6	UniRef90_UPI001E35E63D	77.8	7.4e-17	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1334610_6	1226322.HMPREF1545_00117	110.0	1.64e-30	N/A	N/A
structural_annotation	UHGV-1334610_6	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_7	phrog_1951	74.7	1e-21	head-tail adaptor	connector
UniRef90	UHGV-1334610_7	UniRef90_A0A2V2GSS5	97.1	5.45e-24	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1334610_7	1226322.HMPREF1545_00118	76.6	8.56e-17	N/A	N/A
structural_annotation	UHGV-1334610_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_8	phrog_5	56.1	0.0000000000000011	tail completion or Neck1 protein	connector
UniRef90	UHGV-1334610_8	UniRef90_A0A8J6PH82	110.0	2.66e-28	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1334610_8	411471.SUBVAR_05855	117.0	3.22e-32	N/A	N/A
Pfam	UHGV-1334610_8	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1334610_8	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_9	phrog_78	44.7	0.0000000000027	tail terminator	connector
UniRef90	UHGV-1334610_9	UniRef90_A6XMK2	92.4	2.58e-22	Aminopeptidase	N/A
eggNOG-mapper	UHGV-1334610_9	471875.RUMLAC_02244	99.8	5.8e-26	N/A	N/A
structural_annotation	UHGV-1334610_9	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_10	phrog_88	133.2	9.2e-40	major tail protein	tail
UniRef90	UHGV-1334610_10	UniRef90_R9N908	175.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-1334610_10	1235798.C817_02573	175.0	0	phage major tail protein, phi13 family	N/A
Pfam	UHGV-1334610_10	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1334610_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1334610_10	PF06488,PF18316,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_11	phrog_709	116.6	1.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-1334610_11	1410624.JNKK01000017_gene1983	136.0	8.88e-40	N/A	N/A
structural_annotation	UHGV-1334610_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_12	phrog_3033	62.5	6e-18	N/A	unknown function
UniRef90	UHGV-1334610_12	UniRef90_A0A174UN01	59.3	0.000000000137	Phage-like protein	N/A
eggNOG-mapper	UHGV-1334610_12	1341157.RF007C_02605	70.9	6.07e-16	N/A	N/A
PHROG	UHGV-1334610_13	phrog_5755	177.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1334610_13	UniRef90_UPI000C7C3162	456.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1334610_13	1487921.DP68_11365	271.0	0	tail tape measure protein	N/A
COG	UHGV-1334610_13	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1334610_13	PF20155,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_14	phrog_33	88.8	1.1e-25	distal tail protein Dit	tail
UniRef90	UHGV-1334610_14	UniRef90_A0A1C6H6D2	209.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1334610_14	1497679.EP56_07715	157.0	5.60519e-45	tail component	N/A
COG	UHGV-1334610_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1334610_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_15	phrog_1067	424.1	0	minor head protein	head and packaging
UniRef90	UHGV-1334610_15	UniRef90_A0A1C6H6B4	539.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1334610_15	1160721.RBI_I01574	435.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1334610_15	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1334610_15	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1334610_15	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1334610_15	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_16	phrog_24267	115.4	2.7e-34	N/A	unknown function
UniRef90	UHGV-1334610_16	UniRef90_A0A412AXT4	105.0	4.49e-22	N/A	N/A
eggNOG-mapper	UHGV-1334610_16	556261.HMPREF0240_01282	124.0	2.59e-28	N/A	N/A
Pfam	UHGV-1334610_16	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-1334610_16	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1334610_16	PF10651,NF040788,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-1334610_18	K01447	53.3	0.0000000000000056	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1334610_18	phrog_7698	164.1	0	endolysin	lysis
UniRef90	UHGV-1334610_18	UniRef90_UPI0009861559	277.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1334610_18	293826.Amet_2548	191.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1334610_18	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1334610_18	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1334610_18	PF01510,PF18342,PF08239,MF_04111,NF040670,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_20	phrog_1129	92.5	2.3e-27	holin	lysis
UniRef90	UHGV-1334610_20	UniRef90_UPI001C124A7D	98.2	1.38e-24	phage holin family protein	N/A
eggNOG-mapper	UHGV-1334610_20	537013.CLOSTMETH_01754	94.4	7.41e-24	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1334610_20	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1334610_20	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_21	phrog_2158	192.6	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1334610_21	UniRef90_UPI0018980930	333.0	0	Abi family protein	N/A
eggNOG-mapper	UHGV-1334610_21	511680.BUTYVIB_01292	328.0	0	Abi-like protein	N/A
PADLOC	UHGV-1334610_21	AbiD	132.4	7.2e-39	AbiD	Abi
Pfam	UHGV-1334610_21	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-1334610_21	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-1334610_21	PF07751,COG4823	N/A	N/A	N/A	N/A
UniRef90	UHGV-1334610_23	UniRef90_U2CXQ8	133.0	2.67e-39	Toxin-antitoxin system, antitoxin component, Xre family	N/A
eggNOG-mapper	UHGV-1334610_23	203119.Cthe_1750	56.6	0.000000000835	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1334610_23	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1334610_23	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1334610_25	UniRef90_A0A1C6CDR6	50.1	0.00000874	HTH cro/C1-type domain-containing protein	N/A
KOfam	UHGV-1334610_26	K06400	375.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1334610_26	phrog_95	373.2	0	integrase	integration and excision
UniRef90	UHGV-1334610_26	UniRef90_UPI001C63F9A1	345.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1334610_26	645991.Sgly_0308	322.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1334610_26	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1334610_26	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1334610_26	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1334610_26	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1334610_26	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1334610_27	UniRef90_A0A1H9TD14	93.6	3e-21	N/A	N/A
eggNOG-mapper	UHGV-1334610_27	1158609.I586_00781	77.0	0.00000000000000139	N/A	N/A
Pfam	UHGV-1334610_27	PF16729	N/A	N/A	N/A	DUF5067
structural_annotation	UHGV-1334610_27	PF16729,MF_00791,TIGR04087,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-1334610_29	K01356	74.2	3.1e-21	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1334610_29	phrog_4	116.5	3e-34	transcriptional repressor	transcription regulation
UniRef90	UHGV-1334610_29	UniRef90_A0A6N9PW26	186.0	0	LexA family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1334610_29	1232446.BAIE02000002_gene795	162.0	0	N/A	N/A
Pfam	UHGV-1334610_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1334610_29	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1334610_29	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-1334610_29	PF00717,PF01381,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-1334610_32	K05925	86.6	3.4e-25	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-1334610_32	phrog_359	230.2	0	DNA methyltransferase	other
UniRef90	UHGV-1334610_32	UniRef90_UPI000E09A8FA	304.0	0	MT-A70 family methyltransferase	N/A
eggNOG-mapper	UHGV-1334610_32	1462527.CCDM010000006_gene4447	224.0	0	Belongs to the MT-A70-like family	N/A
PADLOC	UHGV-1334610_32	MTase_II_00048	221.1	0	Type II methyltransferase	RM
Pfam	UHGV-1334610_32	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-1334610_32	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-1334610_32	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1334610_33	526218.Sterm_0798	54.7	0.0000000711	N/A	N/A
PHROG	UHGV-1334610_35	phrog_2872	253.7	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334610_35	UniRef90_A0A316RHU5	304.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1334610_35	754027.HMPREF9554_00709	231.0	0	N/A	N/A
Pfam	UHGV-1334610_35	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1334610_35	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_36	phrog_18107	95.2	8.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-1334610_36	476272.RUMHYD_02831	162.0	0	N/A	N/A
structural_annotation	UHGV-1334610_36	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_37	phrog_3490	144.8	4.40008e-43	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334610_37	UniRef90_A0A0M2NJW5	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-1334610_37	476272.RUMHYD_01740	176.0	0	ERCC4 domain	N/A
Pfam	UHGV-1334610_37	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-1334610_37	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-1334610_37	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1334610_38	K02316	77.8	1.8e-22	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1334610_38	phrog_11992	125.9	3.5e-37	N/A	unknown function
UniRef90	UHGV-1334610_38	UniRef90_A0A2U1BEF8	109.0	6.55e-27	CHC2-type zinc finger protein	N/A
eggNOG-mapper	UHGV-1334610_38	641112.ACOK01000098_gene250	108.0	6.41e-27	CHC2 zinc finger	N/A
PADLOC	UHGV-1334610_38	drt-UG29	66.4	2.8e-19	DRT	DRT
Pfam	UHGV-1334610_38	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1334610_38	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1334610_38	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1334610_39	phrog_8841	513.4	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334610_39	UniRef90_A0A1C6FPW9	791.0	0	Superfamily II helicase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-1334610_39	1007096.BAGW01000023_gene149	551.0	0	N/A	N/A
Pfam	UHGV-1334610_39	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1334610_39	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1334610_39	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1334610_39	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A