UHGV-1334686 (vOTU-161457)

Viral Genome: UHGV-1334686

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1334686
vOTU ID	vOTU-161457
Representative Genome?	Yes
Source	GVD
Original genome ID	Ma_2019_SRR413747_NODE_776_length_19882_cov_3.043073
Associated BioSample	SAMN00792092
Viral genome confidence	Confident

Quality assessment
CheckV method	HMM-based
CheckV completeness	69.07 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9786
Virus hallmark genes (geNomad)	0
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	2.19
Jumbo phage	No

Genome content
Genome length (bp)	19,882
GC content	40.36%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	24
CDS density	86%
Average CDS length (bps)	716.25
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1334686_4	K03111	96.5	5.1e-28	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1334686_4	phrog_44	96.9	2.9e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334686_4	UniRef90_A0A1G5ZZT0	90.1	2.6e-20	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1334686_4	397290.C810_04698	88.2	2.4e-20	Single-strand binding protein family	N/A
Pfam	UHGV-1334686_4	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1334686_4	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1334686_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1334686_4	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1334686_4	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1334686_5	phrog_2150	83.3	2.5e-24	terminase	head and packaging
structural_annotation	UHGV-1334686_7	PF13604,MF_01488,TIGR01448,COG0507	N/A	N/A	N/A	N/A
PHROG	UHGV-1334686_9	phrog_7854	43.2	0.0000000000048	endolysin	lysis
Pfam	UHGV-1334686_9	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1334686_9	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1334686_11	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-1334686_12	phrog_2038	55.5	3.2e-16	upper collar connector	connector
PHROG	UHGV-1334686_16	phrog_4898	41.7	0.000000000019	holin	lysis
PHROG	UHGV-1334686_18	phrog_2006	66.5	2.9e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-1334686_18	10756.CAPSD_BPPH2	74.7	0.00000000000377	viral capsid	N/A
eggNOG-mapper	UHGV-1334686_20	742733.HMPREF9469_02856	56.6	0.00000265	COG COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	N/A
COG	UHGV-1334686_20	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1334686_22	PF05014,MF_03036,TIGR03646,COG3340	N/A	N/A	N/A	N/A

Viral Genome: UHGV-1334686

Genome Information

Genome content

Genome View (Completeness: 69.07)

Functional Annotation