UHGV-1337425 (vOTU-012250)

Viral Genome: UHGV-1337425

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1337425
vOTU ID	vOTU-012250
Representative Genome?	Yes
Source	GVD
Original genome ID	Norman_31_NODE_5_length_42467_cov_34.141116
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.29 (High-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9799
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.89
Jumbo phage	No

Genome content
Genome length (bp)	42,467
GC content	61.79%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	96%
Average CDS length (bps)	848.75
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.29)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1337425_1	phrog_256	130.4	1.5e-38	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337425_1	UniRef90_A0A6L9HCV4	140.0	7.29e-39	Virulence-associated protein E (Fragment)	N/A
eggNOG-mapper	UHGV-1337425_1	1203606.HMPREF1526_00242	197.0	0	virulence-associated E family protein	N/A
COG	UHGV-1337425_1	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
KOfam	UHGV-1337425_2	K02334	860.0	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-1337425_2	phrog_17	409.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337425_2	UniRef90_G9YWD0	1288.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1337425_2	1203606.HMPREF1526_00239	889.0	0	DNA polymerase	N/A
Pfam	UHGV-1337425_2	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-1337425_2	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-1337425_2	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_3	phrog_112	189.4	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337425_3	UniRef90_UPI0019568837	337.0	0	N/A	N/A
eggNOG-mapper	UHGV-1337425_3	693746.OBV_01850	239.0	0	N/A	N/A
Pfam	UHGV-1337425_3	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-1337425_3	PF10991,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-1337425_4	K07465	58.5	1.2e-16	K07465; putative RecB family exonuclease	N/A
PHROG	UHGV-1337425_4	phrog_69	315.1	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337425_4	UniRef90_UPI001956E7CF	567.0	0	N/A	N/A
eggNOG-mapper	UHGV-1337425_4	1232443.BAIA02000078_gene46	447.0	0	N/A	N/A
Pfam	UHGV-1337425_4	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-1337425_4	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-1337425_4	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1337425_5	PF12651,COG3905	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_6	phrog_18562	70.2	4e-20	N/A	unknown function
UniRef90	UHGV-1337425_6	UniRef90_A0A542AIW8	64.7	0.00000000096	Ribonuclease E	N/A
eggNOG-mapper	UHGV-1337425_6	1449126.JQKL01000006_gene837	67.0	0.0000000000084	N/A	N/A
structural_annotation	UHGV-1337425_8	NF007621,COG1974	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_10	phrog_7338	45.4	0.0000000000015	N/A	unknown function
UniRef90	UHGV-1337425_10	UniRef90_A0A1C7FM84	113.0	5.75e-32	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-1337425_10	742738.HMPREF9460_02489	117.0	2.02e-34	Helix-turn-helix domain	N/A
Pfam	UHGV-1337425_10	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1337425_10	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-1337425_10	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1337425_11	742738.HMPREF9460_02488	342.0	0	N/A	N/A
PHROG	UHGV-1337425_12	phrog_524	91.3	6.2e-27	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1337425_12	UniRef90_A0A1Y4FGQ6	535.0	0	P22_AR_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1337425_12	742738.HMPREF9460_01348	395.0	0	P22_AR N-terminal domain	N/A
Pfam	UHGV-1337425_12	PF10547	N/A	N/A	P22_AR N-terminal domain	P22_AR_N
COG	UHGV-1337425_12	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1337425_12	PF10547,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337425_13	UniRef90_UPI001D00CEEC	140.0	3.1305e-42	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1337425_13	428125.CLOLEP_02737	102.0	1.27e-27	N/A	N/A
structural_annotation	UHGV-1337425_13	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_14	phrog_8	56.4	6.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1337425_14	UniRef90_UPI001D008C36	242.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1337425_14	742738.HMPREF9460_02485	116.0	4.25e-32	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1337425_14	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1337425_14	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1337425_14	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_15	phrog_87	57.3	2.4e-16	metallo-protease	other
UniRef90	UHGV-1337425_15	UniRef90_UPI001D02ABB3	322.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1337425_15	428125.CLOLEP_02739	131.0	2.29e-37	N/A	N/A
COG	UHGV-1337425_15	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1337425_15	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_17	phrog_33872	108.1	4.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-1337425_17	693746.OBV_19740	52.4	0.000000123	N/A	N/A
KOfam	UHGV-1337425_18	K14059	323.4	0	int; integrase	N/A
PHROG	UHGV-1337425_18	phrog_1	226.6	0	integrase	integration and excision
UniRef90	UHGV-1337425_18	UniRef90_G9YWB3	754.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1337425_18	742738.HMPREF9460_02482	754.0	0	Phage integrase family	N/A
Pfam	UHGV-1337425_18	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1337425_18	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1337425_18	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1337425_18	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_19	phrog_22978	1055.3	0	N/A	unknown function
UniRef90	UHGV-1337425_19	UniRef90_A0A396KH15	556.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1337425_19	1410650.JHWL01000003_gene2814	349.0	0	N/A	N/A
Pfam	UHGV-1337425_19	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
eggNOG-mapper	UHGV-1337425_20	1226322.HMPREF1545_00786	156.0	6.81999e-40	N/A	N/A
PHROG	UHGV-1337425_21	phrog_511	208.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1337425_21	1226322.HMPREF1545_00785	467.0	0	N/A	N/A
structural_annotation	UHGV-1337425_21	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_23	phrog_37329	43.3	0.0000000000021	N/A	unknown function
eggNOG-mapper	UHGV-1337425_23	1227349.C170_22575	71.6	0.00000000000263	Fibronectin type 3 domain	N/A
COG	UHGV-1337425_23	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1337425_23	PF17166,NF038367,COG2033	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337425_24	UniRef90_UPI001D009058	518.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1337425_24	1226322.HMPREF1545_00783	100.0	6.29e-21	Chaperone of endosialidase	N/A
PHROG	UHGV-1337425_25	phrog_937	47.3	0.0000000000001	hemolysin	other
eggNOG-mapper	UHGV-1337425_25	445972.ANACOL_00203	56.6	0.00000000662	N/A	N/A
PHROG	UHGV-1337425_26	phrog_1129	71.6	7.3e-21	holin	lysis
UniRef90	UHGV-1337425_26	UniRef90_A0A1C7FPV3	173.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1337425_26	1226322.HMPREF1545_00069	137.0	2.01002e-41	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1337425_26	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1337425_26	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1337425_27	K01448	178.7	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1337425_27	phrog_18955	388.3	0	N/A	unknown function
UniRef90	UHGV-1337425_27	UniRef90_A0A1C7FQI4	847.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1337425_27	1121344.JHZO01000003_gene744	251.0	0	Ami_3	N/A
Pfam	UHGV-1337425_27	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-1337425_27	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1337425_27	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1337425_27	PF01520,PF09992,MF_00417,TIGR02883,COG0860,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_28	phrog_2310	63.8	1.4e-18	N/A	unknown function
PHROG	UHGV-1337425_29	phrog_24451	62.5	6.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-1337425_29	1408437.JNJN01000040_gene189	76.3	4.5e-16	N/A	N/A
PHROG	UHGV-1337425_30	phrog_12105	86.2	2.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-1337425_30	1226322.HMPREF1545_03850	65.9	0.000000000564	N/A	N/A
PHROG	UHGV-1337425_32	phrog_1357	251.4	0	major head protein	head and packaging
UniRef90	UHGV-1337425_32	UniRef90_UPI001D02EBA7	794.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1337425_32	1449126.JQKL01000003_gene1695	363.0	0	N/A	N/A
NCBIFam	UHGV-1337425_32	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1337425_32	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_33	phrog_13908	363.1	0	N/A	unknown function
UniRef90	UHGV-1337425_33	UniRef90_UPI0012DFC3C8	117.0	4.78e-26	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1337425_33	1203606.HMPREF1526_02747	71.2	0.0000000000141	N/A	N/A
UniRef90	UHGV-1337425_34	UniRef90_UPI001D021C93	194.0	0	ribosomal-processing cysteine protease Prp	N/A
structural_annotation	UHGV-1337425_34	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_35	phrog_156	345.3	0	portal protein	head and packaging
UniRef90	UHGV-1337425_35	UniRef90_A0A8D9UH10	822.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1337425_35	748224.HMPREF9436_01396	551.0	0	N/A	N/A
structural_annotation	UHGV-1337425_35	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1337425_36	K06909	106.6	3e-31	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1337425_36	phrog_979	202.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1337425_36	UniRef90_UPI001D0245C4	1016.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1337425_36	411483.FAEPRAA2165_01044	674.0	0	Terminase-like family	N/A
Pfam	UHGV-1337425_36	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1337425_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1337425_36	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_37	phrog_309	175.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-1337425_37	UniRef90_UPI001D01EB7C	273.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1337425_37	1408437.JNJN01000045_gene597	186.0	0	HNH endonuclease	N/A
Pfam	UHGV-1337425_37	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-1337425_37	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1337425_37	PF07141	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1337425_38	742738.HMPREF9460_02503	94.4	6.61e-24	N/A	N/A
structural_annotation	UHGV-1337425_38	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1337425_40	NF000937	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337425_41	UniRef90_UPI001898061F	234.0	0	N/A	N/A
Pfam	UHGV-1337425_41	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1337425_41	PF21327,NF011240	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337425_42	UniRef90_UPI001C3A10B1	55.5	0.0000000983	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-1337425_42	742738.HMPREF9460_04055	98.6	1.22e-25	N/A	N/A
KOfam	UHGV-1337425_44	K14440	79.1	1.3e-23	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1337425_44	phrog_62	347.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337425_44	UniRef90_G9YWD5	835.0	0	SNF2 domain protein	N/A
eggNOG-mapper	UHGV-1337425_44	693746.OBV_01800	666.0	0	snf2 family	N/A
PADLOC	UHGV-1337425_44	DpdE_00010	91.3	1.3e-26	DpdE	DPD
Pfam	UHGV-1337425_44	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
COG	UHGV-1337425_44	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1337425_44	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337425_45	UniRef90_A0A3D1WNA6	57.8	0.000000000148	Helicase	N/A
eggNOG-mapper	UHGV-1337425_45	693746.OBV_43130	56.6	0.00000000361	snf2 family	N/A
COG	UHGV-1337425_45	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
PHROG	UHGV-1337425_46	phrog_93	74.0	2e-21	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337425_46	UniRef90_H1C943	197.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1337425_46	1401067.HMPREF0872_06855	104.0	5.07e-28	VRR_NUC	N/A
Pfam	UHGV-1337425_46	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1337425_46	PF01974,MF_01490,NF011269	N/A	N/A	N/A	N/A
PHROG	UHGV-1337425_48	phrog_256	865.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337425_48	UniRef90_UPI0018AA4A56	1419.0	0	virulence-associated protein E	N/A
eggNOG-mapper	UHGV-1337425_48	1232443.BAIA02000078_gene40	850.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1337425_48	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1337425_48	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1337425_48	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A