UHGV-1337886 (vOTU-123578)

Viral Genome: UHGV-1337886

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1337886
vOTU ID	vOTU-123578
Representative Genome?	Yes
Source	GVD
Original genome ID	Norman_159_NODE_20_length_36833_cov_38.990755
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	78.18 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9687
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	-0.54
Jumbo phage	No

Genome content
Genome length (bp)	36,778
GC content	41.78%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	58
CDS density	85%
Average CDS length (bps)	537.26
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1337886_1	phrog_1535	87.8	1.3e-26	tail length tape measure protein	tail
UniRef90	UHGV-1337886_1	UniRef90_W1I523	220.0	0	Uncultured bacterium extrachromosomal DNA RGI02278	N/A
eggNOG-mapper	UHGV-1337886_1	1121866.AUGK01000003_gene1437	207.0	0	phage tail tape measure protein	N/A
COG	UHGV-1337886_1	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1337886_1	PF05537,TIGR01760	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1337886_2	1211844.CBLM010000023_gene987	60.1	0.000000000265	N/A	N/A
UniRef90	UHGV-1337886_3	UniRef90_A0A843HLA7	115.0	6.54e-31	N/A	N/A
Pfam	UHGV-1337886_3	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1337886_3	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_4	phrog_158	41.9	0.000000000017	major tail protein	tail
eggNOG-mapper	UHGV-1337886_4	1121333.JMLH01000047_gene1013	169.0	0	N/A	N/A
structural_annotation	UHGV-1337886_4	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1337886_5	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1337886_6	476272.RUMHYD_01963	79.3	3.12e-16	N/A	N/A
eggNOG-mapper	UHGV-1337886_7	1121866.AUGK01000003_gene1432	71.6	0.0000000000000282	N/A	N/A
UniRef90	UHGV-1337886_8	UniRef90_A0A1C0AG54	85.9	1.13e-19	DNA-packaging protein	N/A
Pfam	UHGV-1337886_8	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1337886_8	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_10	phrog_422	277.6	0	major head protein	head and packaging
UniRef90	UHGV-1337886_10	UniRef90_A0A345MKD0	221.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-1337886_10	645991.Sgly_0340	244.0	0	N/A	N/A
structural_annotation	UHGV-1337886_10	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_12	phrog_64	176.0	0	portal protein	head and packaging
UniRef90	UHGV-1337886_12	UniRef90_A0A3D3Y472	324.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1337886_12	1121866.AUGK01000003_gene1429	293.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1337886_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1337886_12	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_14	phrog_38	196.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1337886_14	UniRef90_A0A318EQM2	482.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1337886_14	1123263.AUKY01000015_gene1608	501.0	0	chromosome segregation	N/A
NCBIFam	UHGV-1337886_14	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1337886_14	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1337886_14	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337886_15	UniRef90_A0A0S2W1I0	225.0	0	Cu_amine_oxidN1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1337886_15	1297617.JPJD01000001_gene2682	224.0	0	Peptidase propeptide and YPEB domain protein	N/A
Pfam	UHGV-1337886_15	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
COG	UHGV-1337886_15	COG3212	N/A	N/A	PepSY domain containing protein, regulator of zincin peptidase activity	N/A
KOfam	UHGV-1337886_16	K14060	149.4	2.66247e-44	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1337886_16	phrog_125	204.9	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337886_16	UniRef90_A0A7X9EAR6	247.0	0	Recombinase family protein (Fragment)	N/A
eggNOG-mapper	UHGV-1337886_16	1408437.JNJN01000011_gene1119	221.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1337886_16	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1337886_16	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1337886_16	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337886_17	UniRef90_A0A351F9G2	59.3	0.000000000494	RHH_1 domain-containing protein	N/A
UniRef90	UHGV-1337886_20	UniRef90_A0A353J147	82.8	1.64e-19	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1337886_20	1415774.U728_2928	62.8	0.00000000000195	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1337886_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1337886_20	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_21	phrog_606	41.5	0.00000000002	terminase small subunit	head and packaging
UniRef90	UHGV-1337886_21	UniRef90_UPI001C012D23	96.7	8.7e-22	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1337886_21	877421.AUJT01000054_gene66	58.2	0.000000023	N/A	N/A
structural_annotation	UHGV-1337886_21	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_22	phrog_801	81.4	1.6e-23	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1337886_22	UniRef90_A0A810QB82	142.0	2.9105e-42	N/A	N/A
eggNOG-mapper	UHGV-1337886_22	1244856.K4PY83_9CAUD	68.2	0.000000000000784	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-1337886_22	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1337886_22	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_28	phrog_20532	44.9	0.0000000000019	N/A	unknown function
eggNOG-mapper	UHGV-1337886_28	1232443.BAIA02000066_gene981	65.5	0.0000000000701	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
COG	UHGV-1337886_28	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
PHROG	UHGV-1337886_29	phrog_244	80.5	2.6e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1337886_29	742740.HMPREF9474_03491	131.0	3.99e-38	N/A	N/A
structural_annotation	UHGV-1337886_29	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1337886_30	K02314	216.5	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1337886_30	phrog_19	213.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337886_30	UniRef90_A0A1C6JHY9	197.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1337886_30	879212.DespoDRAFT_01788	142.0	3.94e-35	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	N/A
Pfam	UHGV-1337886_30	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1337886_30	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1337886_30	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_31	phrog_2149	96.2	9e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1337886_31	UniRef90_R5HZ90	103.0	4.3e-23	DNA replication protein	N/A
eggNOG-mapper	UHGV-1337886_31	411490.ANACAC_00800	116.0	1.16e-28	N/A	N/A
structural_annotation	UHGV-1337886_31	PF01475,TIGR01610,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_32	phrog_862	44.8	0.0000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1337886_32	279238.Saro_3022	111.0	8.75e-28	N/A	N/A
structural_annotation	UHGV-1337886_32	PF05037,COG2965	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337886_35	UniRef90_L7VHB2	87.4	2.3e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1337886_35	1121335.Clst_0370	87.4	3.85e-22	N/A	N/A
structural_annotation	UHGV-1337886_35	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_36	phrog_1123	52.4	0.0000000000000073	N/A	unknown function
UniRef90	UHGV-1337886_36	UniRef90_UPI00164CB55F	58.9	0.00000000268	DNA gyrase	N/A
structural_annotation	UHGV-1337886_36	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
KOfam	UHGV-1337886_38	K14059	153.6	2.8026e-45	int; integrase	N/A
PHROG	UHGV-1337886_38	phrog_1	157.4	0	integrase	integration and excision
UniRef90	UHGV-1337886_38	UniRef90_UPI001AA1BF73	390.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1337886_38	1507.HMPREF0262_00420	320.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1337886_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1337886_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1337886_38	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-1337886_39	K18830	52.1	0.000000000000013	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1337886_39	phrog_8	43.4	0.0000000000039	transcriptional regulator	transcription regulation
UniRef90	UHGV-1337886_39	UniRef90_A0A1Y4L0A2	181.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1337886_39	748224.HMPREF9436_01444	121.0	2.75e-33	N/A	N/A
Pfam	UHGV-1337886_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1337886_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1337886_39	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1337886_41	K19304	91.7	1.1e-26	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1337886_41	phrog_7767	81.2	1.2e-23	metallo-endopeptidase	other
UniRef90	UHGV-1337886_41	UniRef90_A0A2V2EQ01	197.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1337886_41	1157640.AQWO01000013_gene1501	94.4	2.79e-21	Peptidase family M23	N/A
Pfam	UHGV-1337886_41	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-1337886_41	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-1337886_42	phrog_4105	82.3	4.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-1337886_42	610130.Closa_0762	100.0	2.65e-26	N/A	N/A
eggNOG-mapper	UHGV-1337886_44	1160721.RBI_II00522	49.7	0.000000305	N/A	N/A
PHROG	UHGV-1337886_45	phrog_134	53.1	0.0000000000000043	N/A	unknown function
UniRef90	UHGV-1337886_45	UniRef90_A0A355BFE7	68.6	0.0000000000000163	XkdX family protein	N/A
eggNOG-mapper	UHGV-1337886_45	697281.Mahau_0596	62.0	0.00000000000108	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1337886_45	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1337886_45	PF09693,TIGR01669	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1337886_46	1232443.BAIA02000078_gene12	81.3	1.82e-18	N/A	N/A
PHROG	UHGV-1337886_47	phrog_19111	105.5	4.76441e-44	N/A	unknown function
eggNOG-mapper	UHGV-1337886_47	1297617.JPJD01000034_gene670	61.6	0.000000123	N/A	N/A
structural_annotation	UHGV-1337886_47	PF16756,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
UniRef90	UHGV-1337886_48	UniRef90_A0A0S2W0Q3	84.0	7.11e-17	Glycoprotein gp2	N/A
eggNOG-mapper	UHGV-1337886_48	1297617.JPJD01000059_gene2615	84.0	1.19e-17	N/A	N/A
structural_annotation	UHGV-1337886_49	PF16408,NF033510	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_50	phrog_10898	268.5	0	N/A	unknown function
UniRef90	UHGV-1337886_50	UniRef90_A0A7U3NJT3	187.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1337886_50	717606.PaecuDRAFT_2136	80.1	0.0000000000000172	S-layer homology domain	N/A
COG	UHGV-1337886_50	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1337886_50	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1337886_53	1297617.JPJD01000014_gene875	60.5	0.000000000706	N/A	N/A
eggNOG-mapper	UHGV-1337886_54	552398.HMPREF0866_02181	64.3	0.0000000000842	N/A	N/A
PHROG	UHGV-1337886_55	phrog_18725	80.9	8.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1337886_55	756499.Desde_2424	118.0	3.11e-32	N/A	N/A
PHROG	UHGV-1337886_56	phrog_13879	263.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1337886_56	665956.HMPREF1032_03630	126.0	5.68e-28	N/A	N/A
structural_annotation	UHGV-1337886_56	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_57	phrog_1194	67.8	1.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1337886_57	742740.HMPREF9474_03515	53.9	0.000000184	N/A	N/A
Pfam	UHGV-1337886_57	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1337886_57	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1337886_58	phrog_58	97.6	1.2e-28	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1337886_58	742733.HMPREF9469_01814	98.6	2.67e-18	tape measure	N/A
COG	UHGV-1337886_58	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A