UHGV-1340951 (vOTU-032875)

Viral Genome: UHGV-1340951

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1340951
vOTU ID	vOTU-032875
Representative Genome?	Yes
Source	GVD
Original genome ID	Norman_77_NODE_17_length_32822_cov_10.373272
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	81.76 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9745
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.47
Jumbo phage	No

Genome content
Genome length (bp)	32,822
GC content	46.77%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	93%
Average CDS length (bps)	665.15
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 81.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1340951_1	phrog_1535	389.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1340951_1	UniRef90_A0A174SV65	1187.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-1340951_1	742740.HMPREF9474_03514	564.0	0	tape measure	N/A
COG	UHGV-1340951_1	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1340951_1	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_2	phrog_1194	67.3	2.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1340951_2	742740.HMPREF9474_03515	172.0	0	N/A	N/A
structural_annotation	UHGV-1340951_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_3	phrog_13879	422.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1340951_3	742740.HMPREF9474_03516	1014.0	0	N/A	N/A
structural_annotation	UHGV-1340951_3	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_4	phrog_18725	108.1	7.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-1340951_4	742740.HMPREF9474_03517	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-1340951_5	1298920.KI911353_gene4837	106.0	4.23e-27	N/A	N/A
eggNOG-mapper	UHGV-1340951_6	1304866.K413DRAFT_4766	166.0	7.56701e-44	N/A	N/A
Pfam	UHGV-1340951_6	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-1340951_6	PF21722,PF20942,TIGR04488,COG3401	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1340951_7	742733.HMPREF9469_00968	108.0	1.37e-29	N/A	N/A
PHROG	UHGV-1340951_9	phrog_199	56.0	4.5e-16	holin	lysis
UniRef90	UHGV-1340951_9	UniRef90_R0CKA9	308.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1340951_9	1121333.JMLH01000047_gene1005	155.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1340951_9	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1340951_9	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1340951_9	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_10	phrog_19695	64.5	2.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1340951_10	411462.DORLON_00772	86.3	1.67e-20	N/A	N/A
structural_annotation	UHGV-1340951_10	PF10651	N/A	N/A	N/A	N/A
UniRef90	UHGV-1340951_11	UniRef90_A0A174NC72	286.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1340951_11	742733.HMPREF9469_00973	301.0	0	N/A	N/A
structural_annotation	UHGV-1340951_11	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_12	phrog_38078	93.7	1.6e-38	N/A	unknown function
UniRef90	UHGV-1340951_12	UniRef90_N9XDK0	499.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-1340951_12	1298920.KI911353_gene4832	396.0	0	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-1340951_12	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1340951_12	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1340951_12	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1340951_12	PF00877,PF19127,TIGR02594,TIGR04035,COG3738	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1340951_13	500633.CLOHIR_00330	209.0	0	N/A	N/A
structural_annotation	UHGV-1340951_13	PF04381,MF_00194,NF001461,COG2974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1340951_15	500633.CLOHIR_00328	110.0	1.62e-28	N/A	N/A
eggNOG-mapper	UHGV-1340951_16	742735.HMPREF9467_01371	67.8	0.000000000000705	N/A	N/A
KOfam	UHGV-1340951_17	K14059	164.1	0	int; integrase	N/A
PHROG	UHGV-1340951_17	phrog_1	148.6	4.76441e-44	integrase	integration and excision
UniRef90	UHGV-1340951_17	UniRef90_R5FKB7	689.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1340951_17	1304866.K413DRAFT_3002	314.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1340951_17	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1340951_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1340951_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1340951_17	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_18	phrog_1847	458.5	0	N/A	unknown function
UniRef90	UHGV-1340951_18	UniRef90_A0A1C7GE24	820.0	0	Chromosome segregation ATPase	N/A
eggNOG-mapper	UHGV-1340951_18	608534.GCWU000341_02322	430.0	0	T5orf172	N/A
Pfam	UHGV-1340951_18	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-1340951_18	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-1340951_18	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1340951_18	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_19	phrog_87	48.9	0.000000000000041	metallo-protease	other
UniRef90	UHGV-1340951_19	UniRef90_A0A1I0CMS0	482.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1340951_19	742733.HMPREF9469_01472	181.0	0	N/A	N/A
Pfam	UHGV-1340951_19	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1340951_19	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1340951_19	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1340951_20	K22300	64.9	1.7e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1340951_20	phrog_8	69.9	5e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1340951_20	UniRef90_A0A1I0CKW7	230.0	0	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-1340951_20	411461.DORFOR_00032	85.5	1.67e-19	sequence-specific DNA binding	N/A
Pfam	UHGV-1340951_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1340951_20	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1340951_20	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1340951_21	UniRef90_A0A1I0CKZ6	146.0	1.26117e-44	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-1340951_21	1121289.JHVL01000079_gene1187	69.3	0.0000000000000072	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1340951_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1340951_21	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1340951_28	1449050.JNLE01000005_gene3947	132.0	7.18e-36	N/A	N/A
PHROG	UHGV-1340951_29	phrog_2205	160.7	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340951_29	UniRef90_A0A1I0CLP3	363.0	0	Bacteriophage Mu Gam like protein	N/A
eggNOG-mapper	UHGV-1340951_29	1203606.HMPREF1526_01878	152.0	9.52883e-44	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-1340951_29	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
structural_annotation	UHGV-1340951_29	PF07352	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_30	phrog_1366	243.3	0	N/A	unknown function
UniRef90	UHGV-1340951_30	UniRef90_A0A1I0CM14	614.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1340951_30	1410670.JHXF01000015_gene2269	330.0	0	AAA domain	N/A
Pfam	UHGV-1340951_30	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1340951_30	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1340951_30	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1340951_31	K01160	65.5	1.4e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1340951_31	phrog_140	133.1	1.4e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340951_31	UniRef90_A0A1I0CMR7	310.0	0	Holliday junction resolvase RusA (Prophage-encoded endonuclease)	N/A
eggNOG-mapper	UHGV-1340951_31	545697.HMPREF0216_02819	124.0	3.65e-34	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1340951_31	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1340951_31	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1340951_31	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1340951_32	K18959	200.2	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-1340951_32	phrog_16	198.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340951_32	UniRef90_A0A1I0CNH6	923.0	0	Superfamily II DNA or RNA helicase	N/A
eggNOG-mapper	UHGV-1340951_32	398512.JQKC01000009_gene434	372.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-1340951_32	mREase_IV_00004	45.1	0.00000000000039	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1340951_32	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1340951_32	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1340951_32	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1340951_32	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_33	phrog_378	80.2	3.5e-23	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340951_33	UniRef90_A0A7C8LHJ4	138.0	1.05e-38	N/A	N/A
eggNOG-mapper	UHGV-1340951_33	279010.BL03492	112.0	9.34e-30	N/A	N/A
Pfam	UHGV-1340951_33	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1340951_33	PF05037,MF_00720,NF004948,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_34	phrog_864	262.6	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340951_34	UniRef90_A0A1I0CM00	1157.0	0	Phage/plasmid primase, P4 family, C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1340951_34	478749.BRYFOR_09102	452.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1340951_34	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1340951_34	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-1340951_34	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1340951_34	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1340951_34	PF02257,PF05272,PF08706,MF_01407,NF011296,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-1340951_38	K00390	99.6	2.7e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1340951_38	phrog_424	128.7	4.1e-38	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1340951_38	UniRef90_UPI001F2AAE1A	414.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1340951_38	411490.ANACAC_02386	353.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1340951_38	BrxP_00001	41.9	1.6e-24	BrxP	BREX
Pfam	UHGV-1340951_38	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1340951_38	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1340951_38	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_39	phrog_9572	53.1	0.000000000000005	sulfatase-modifying factor enzyme	other
eggNOG-mapper	UHGV-1340951_39	742735.HMPREF9467_00919	127.0	3.52e-38	N/A	N/A
PHROG	UHGV-1340951_41	phrog_2834	40.5	0.000000000034	N/A	unknown function
structural_annotation	UHGV-1340951_41	PF11331,TIGR02098	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1340951_42	COG4446	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_44	phrog_1558	149.7	1.26117e-44	N/A	unknown function
UniRef90	UHGV-1340951_44	UniRef90_UPI001D077CB1	337.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1340951_44	1163671.JAGI01000002_gene3057	168.0	0	N/A	N/A
structural_annotation	UHGV-1340951_44	PF13613,MF_00245,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1340951_45	phrog_606	60.0	4.1e-17	terminase small subunit	head and packaging
UniRef90	UHGV-1340951_45	UniRef90_UPI001D088AD3	222.0	0	DNA-packaging protein	N/A
Pfam	UHGV-1340951_45	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
COG	UHGV-1340951_45	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1340951_45	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1340951_46	K06909	57.7	2e-16	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1340951_46	phrog_2	52.4	0.000000000000012	terminase large subunit	head and packaging
UniRef90	UHGV-1340951_46	UniRef90_A0A1C7G6C9	809.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1340951_46	742740.HMPREF9474_03500	721.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1340951_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1340951_46	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A