UHGV-1345892 (vOTU-084374)

Viral Genome: UHGV-1345892

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1345892
vOTU ID	vOTU-084374
Representative Genome?	Yes
Source	GVD
Original genome ID	Minot_Diet_SRR5088936_NODE_44_length_37064_cov_12.212921
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.86 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9666
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.33
Jumbo phage	No

Genome content
Genome length (bp)	37,064
GC content	58.31%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	91%
Average CDS length (bps)	651.17
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1345892_1	665956.HMPREF1032_03597	92.4	3.35e-18	DNA binding	N/A
COG	UHGV-1345892_1	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
KOfam	UHGV-1345892_2	K03546	51.0	0.000000000000014	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1345892_2	phrog_1499	456.2	0	N/A	unknown function
UniRef90	UHGV-1345892_2	UniRef90_A0A367GHQ5	818.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-1345892_2	1235798.C817_04766	511.0	0	AAA ATPase domain	N/A
Pfam	UHGV-1345892_2	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1345892_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1345892_2	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_3	phrog_124	228.5	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1345892_3	UniRef90_UPI00122C2B12	517.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1345892_3	1273103.NM10_06861	360.0	0	AAA domain	N/A
Pfam	UHGV-1345892_3	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1345892_3	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_4	phrog_2698	189.5	0	N/A	unknown function
UniRef90	UHGV-1345892_4	UniRef90_A0A367GFE7	342.0	0	N/A	N/A
eggNOG-mapper	UHGV-1345892_4	294382.Q5YA95_9CAUD	140.0	5.21e-40	N/A	N/A
structural_annotation	UHGV-1345892_4	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-1345892_5	K17677	348.3	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1345892_5	phrog_16	272.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1345892_5	UniRef90_A0A367GH68	1084.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1345892_5	610130.Closa_1369	761.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-1345892_5	mREase_IV_00005	137.8	8.30003e-41	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1345892_5	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1345892_5	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1345892_5	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1345892_5	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-1345892_6	K07505	369.8	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1345892_6	phrog_2597	1084.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1345892_6	UniRef90_A0A367GFF7	1521.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1345892_6	999413.HMPREF1094_00232	865.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1345892_6	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1345892_6	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1345892_6	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1345892_6	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1345892_7	K01160	41.9	0.000000000024	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1345892_7	phrog_140	90.9	1.5e-26	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1345892_7	UniRef90_A0A367GHC7	286.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1345892_7	394503.Ccel_3302	157.0	0	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1345892_7	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1345892_7	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1345892_7	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1345892_12	1297617.JPJD01000059_gene2640	133.0	2.26e-38	N/A	N/A
structural_annotation	UHGV-1345892_12	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_13	phrog_1281	123.2	1.2e-36	N/A	unknown function
UniRef90	UHGV-1345892_13	UniRef90_A0A291T9N2	132.0	8.01e-37	N/A	N/A
eggNOG-mapper	UHGV-1345892_13	1035193.HMPREF9073_01980	105.0	5.49e-27	N/A	N/A
Pfam	UHGV-1345892_13	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1345892_13	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1345892_13	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_14	phrog_5763	87.8	1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1345892_14	1203606.HMPREF1526_00347	81.3	0.00000000000000506	N/A	N/A
KOfam	UHGV-1345892_15	K07474	122.5	5.8e-36	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1345892_15	phrog_51	116.2	2.2e-34	terminase small subunit	head and packaging
UniRef90	UHGV-1345892_15	UniRef90_A0A895HF95	135.0	2.01e-37	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1345892_15	1196028.ALEF01000043_gene470	133.0	1.52e-37	Terminase small subunit	N/A
Pfam	UHGV-1345892_15	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1345892_15	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1345892_15	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1345892_16	K06909	74.6	1.4e-21	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1345892_16	phrog_2	62.5	9.8e-18	terminase large subunit	head and packaging
UniRef90	UHGV-1345892_16	UniRef90_A0A372V3S5	647.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1345892_16	645991.Sgly_0335	567.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1345892_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1345892_16	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_17	phrog_533	211.6	0	portal protein	head and packaging
UniRef90	UHGV-1345892_17	UniRef90_UPI001875FE3B	645.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1345892_17	1507.HMPREF0262_01175	472.0	0	N/A	N/A
structural_annotation	UHGV-1345892_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_18	phrog_581	245.3	0	minor head protein	head and packaging
UniRef90	UHGV-1345892_18	UniRef90_UPI000A270255	348.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1345892_18	1507.HMPREF0262_01176	293.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1345892_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1345892_18	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
COG	UHGV-1345892_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1345892_18	PF06152,PF01129,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_20	phrog_422	275.8	0	major head protein	head and packaging
UniRef90	UHGV-1345892_20	UniRef90_UPI0018750F33	454.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1345892_20	663278.Ethha_1589	374.0	0	N/A	N/A
structural_annotation	UHGV-1345892_20	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_21	phrog_541	57.8	1.8e-16	head-tail adaptor	connector
eggNOG-mapper	UHGV-1345892_21	1294142.CINTURNW_1031	90.5	7.41e-22	N/A	N/A
PHROG	UHGV-1345892_22	phrog_8710	105.6	3e-31	N/A	unknown function
eggNOG-mapper	UHGV-1345892_22	1507.HMPREF0262_01181	108.0	2.32e-29	N/A	N/A
structural_annotation	UHGV-1345892_22	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1345892_23	742740.HMPREF9474_03509	93.6	6.68e-23	N/A	N/A
PHROG	UHGV-1345892_24	phrog_2595	49.9	0.00000000000005	head-tail connector protein	connector
eggNOG-mapper	UHGV-1345892_24	1507.HMPREF0262_01183	80.1	1.91e-17	N/A	N/A
structural_annotation	UHGV-1345892_24	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_25	phrog_820	131.5	3.6e-39	major tail protein	tail
eggNOG-mapper	UHGV-1345892_25	1507.HMPREF0262_01184	206.0	0	domain, Protein	N/A
COG	UHGV-1345892_25	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1345892_25	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_26	phrog_8300	82.4	4.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-1345892_26	1507.HMPREF0262_00213	96.7	1.26e-24	N/A	N/A
structural_annotation	UHGV-1345892_26	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_27	phrog_8355	67.0	1.6e-19	N/A	unknown function
UniRef90	UHGV-1345892_27	UniRef90_UPI0018A7EA5D	114.0	4.04e-30	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1345892_27	1507.HMPREF0262_01186	100.0	1.32e-25	N/A	N/A
structural_annotation	UHGV-1345892_27	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_28	phrog_1535	136.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1345892_28	665956.HMPREF1032_03628	247.0	0	domain protein	N/A
COG	UHGV-1345892_28	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_29	phrog_1194	53.2	0.0000000000000046	N/A	unknown function
eggNOG-mapper	UHGV-1345892_29	411471.SUBVAR_06933	114.0	5.36e-31	N/A	N/A
structural_annotation	UHGV-1345892_29	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1345892_31	665956.HMPREF1032_00120	99.4	4.59e-27	N/A	N/A
structural_annotation	UHGV-1345892_31	PF01402,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1345892_34	K07741	69.5	1.1e-19	antB; anti-repressor protein	N/A
PHROG	UHGV-1345892_34	phrog_130	236.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1345892_34	UniRef90_A0A7I8D1H8	337.0	0	Putative antirepressor - phage associated	N/A
eggNOG-mapper	UHGV-1345892_34	1232449.BAHV02000010_gene2739	277.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1345892_34	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1345892_34	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1345892_34	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1345892_34	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-1345892_36	UniRef90_UPI0018835F0C	205.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1345892_36	476272.RUMHYD_00002	86.7	0.0000000000000033	N/A	N/A
KOfam	UHGV-1345892_38	K19304	120.0	2.5e-35	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1345892_38	phrog_10030	93.4	9.3e-28	tail length tape measure protein	tail
UniRef90	UHGV-1345892_38	UniRef90_A0A3D1PRD1	405.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1345892_38	1382304.JNIL01000001_gene2694	102.0	1.68e-22	G5	N/A
Pfam	UHGV-1345892_38	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-1345892_38	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1345892_38	PF01551,NF040883	N/A	N/A	N/A	N/A
PHROG	UHGV-1345892_39	phrog_1863	80.1	1.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-1345892_39	665956.HMPREF1032_03922	105.0	1.27e-28	N/A	N/A
PHROG	UHGV-1345892_40	phrog_1129	61.6	9.8e-18	holin	lysis
UniRef90	UHGV-1345892_40	UniRef90_A0A367FT42	159.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1345892_40	693746.OBV_13280	112.0	1.76e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1345892_40	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1345892_40	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1345892_41	K06400	363.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1345892_41	phrog_95	370.5	0	integrase	integration and excision
UniRef90	UHGV-1345892_41	UniRef90_UPI001D0F283A	615.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1345892_41	718252.FP2_01160	594.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1345892_41	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1345892_41	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1345892_41	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1345892_41	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1345892_41	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1345892_42	K03466	236.0	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-1345892_42	phrog_1358	127.7	4.5e-38	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1345892_42	UniRef90_A0A3A6JY26	325.0	0	N/A	N/A
eggNOG-mapper	UHGV-1345892_42	411471.SUBVAR_05502	221.0	0	Belongs to the FtsK SpoIIIE SftA family	N/A
PADLOC	UHGV-1345892_42	ZorD1_00005	80.8	1.4e-23	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1345892_42	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
Pfam	UHGV-1345892_42	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-1345892_42	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1345892_42	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
PHROG	UHGV-1345892_43	phrog_87	47.4	0.00000000000025	metallo-protease	other
UniRef90	UHGV-1345892_43	UniRef90_UPI001C3AA0FC	126.0	1.61e-34	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1345892_43	663278.Ethha_2376	95.5	2.75e-23	N/A	N/A
structural_annotation	UHGV-1345892_43	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1345892_44	K22299	46.5	0.00000000000081	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1345892_44	phrog_8	41.4	0.000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-1345892_44	UniRef90_A0A372V3Y4	99.8	8.97e-25	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1345892_44	97138.C820_00203	53.9	0.000000207	Transcriptional	N/A
Pfam	UHGV-1345892_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1345892_44	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1345892_44	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1345892_45	UniRef90_A0A1C5ZI76	54.3	0.0000000702	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1345892_45	1226322.HMPREF1545_00148	61.2	0.0000000000713	Transcriptional	N/A
Pfam	UHGV-1345892_45	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1345892_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1345892_50	PF12957	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1345892_52	665956.HMPREF1032_03597	136.0	1.27e-33	DNA binding	N/A
COG	UHGV-1345892_52	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A