Viral Genome: UHGV-1349978


Overview
UHGV ID UHGV-1349978
vOTU ID vOTU-170524
Representative Genome? Yes
Source GVD
Original genome ID Shkoporov_2018_SRR6128101_NODE_60_length_40467_cov_19.261581
Associated BioSample N/A
Viral genome confidence Confident

Quality assessment
CheckV method AAI-based
CheckV completeness 85.12 (Medium-quality)
Trimmed provirus No
CheckV viral markers 13
CheckV host markers 1
Recoded stop codon No
Viral Content
geNomad score 0.9526
Virus hallmark genes (geNomad) 6
Plasmid hallmark genes (geNomad) 0
viralVerify prediction Virus
viralVerify score 22.69
Jumbo phage No

Genome content
Genome length (bp) 40,467
GC content 50.77%
Genetic code The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes 66
CDS density 90%
Average CDS length (bps) 549.77
Total tRNA genes 0
Suppressor tRNA genes 0



Genome content

Select to view:   Genome Viewer   Functional Annotation

Genome View (Completeness: 85.12)
x
This website uses cookies to improve user experience. By using this service you consent to all cookies in accordance with our privacy policy. OK