UHGV-1354239 (vOTU-033283)

Viral Genome: UHGV-1354239

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1354239
vOTU ID	vOTU-033283
Representative Genome?	Yes
Source	GVD
Original genome ID	SRR5495007_NODE_18_length_29026_cov_67.247247
Associated BioSample	SAMN06860642
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.97 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9742
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.96
Jumbo phage	No

Genome content
Genome length (bp)	29,026
GC content	35.35%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	98%
Average CDS length (bps)	947.10
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1354239_3	phrog_6918	50.4	0.000000000000034	holin	lysis
Pfam	UHGV-1354239_3	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1354239_3	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_4	phrog_4259	60.3	2.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-1354239_4	742740.HMPREF9474_02276	52.4	0.000000221	N/A	N/A
PHROG	UHGV-1354239_5	phrog_4321	139.4	9.99967e-42	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1354239_5	UniRef90_A0A649V2X7	135.0	3.82e-38	Homing endonuclease	N/A
eggNOG-mapper	UHGV-1354239_5	475178.B2BTG9_9CAUD	134.0	1.29e-38	N/A	N/A
PHROG	UHGV-1354239_6	phrog_4247	66.0	4.2e-19	virion structural protein	head and packaging
PHROG	UHGV-1354239_7	phrog_7021	54.8	0.0000000000000014	N/A	unknown function
PHROG	UHGV-1354239_8	phrog_9	260.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1354239_8	UniRef90_A0A5C7M263	778.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1354239_8	691965.D4P7C5_9CAUD	766.0	0	Phage Terminase	N/A
Pfam	UHGV-1354239_8	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1354239_8	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1354239_8	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_9	phrog_12	103.5	1.3e-30	portal protein	head and packaging
UniRef90	UHGV-1354239_9	UniRef90_A0A1C5N1E3	336.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1354239_9	428125.CLOLEP_01411	324.0	0	Phage portal protein	N/A
Pfam	UHGV-1354239_9	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1354239_9	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1354239_10	K06904	84.6	8.4e-25	N/A	N/A
PHROG	UHGV-1354239_10	phrog_3270	555.3	0	head maturation protease	head and packaging
UniRef90	UHGV-1354239_10	UniRef90_A0A6G5Y7H0	403.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1354239_10	1476888.X4YUP1_9CAUD	364.0	0	peptidase activity	N/A
Pfam	UHGV-1354239_10	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1354239_10	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-1354239_10	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_11	phrog_4270	95.1	4.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-1354239_11	478749.BRYFOR_08520	87.4	6.37e-21	N/A	N/A
structural_annotation	UHGV-1354239_11	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1354239_12	UniRef90_A0A6M3SX82	59.3	0.00000000291	Tail terminator	N/A
eggNOG-mapper	UHGV-1354239_12	478749.BRYFOR_08519	84.0	1.25e-19	N/A	N/A
structural_annotation	UHGV-1354239_12	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_13	phrog_2645	312.7	0	major tail protein	tail
UniRef90	UHGV-1354239_13	UniRef90_A0A2U8UI58	242.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1354239_13	742740.HMPREF9474_02267	238.0	0	N/A	N/A
structural_annotation	UHGV-1354239_13	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_14	phrog_4282	120.7	1e-35	N/A	unknown function
UniRef90	UHGV-1354239_14	UniRef90_D4P7T3	75.9	0.0000000000000277	Gp065	N/A
eggNOG-mapper	UHGV-1354239_14	428125.CLOLEP_01416	65.5	0.00000000000904	N/A	N/A
PHROG	UHGV-1354239_15	phrog_4338	121.0	6.3e-36	N/A	unknown function
eggNOG-mapper	UHGV-1354239_15	665950.HMPREF1025_02004	80.5	2.23e-16	N/A	N/A
PHROG	UHGV-1354239_16	phrog_5	44.1	0.0000000000048	tail completion or Neck1 protein	connector
UniRef90	UHGV-1354239_16	UniRef90_UPI000659DD5E	102.0	7.29e-26	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1354239_16	411460.RUMTOR_01336	101.0	4.94e-26	N/A	N/A
structural_annotation	UHGV-1354239_16	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_17	phrog_4372	620.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1354239_17	665950.HMPREF1025_02007	323.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1354239_17	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-1354239_17	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-1354239_17	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1354239_17	COG5412	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-1354239_18	UniRef90_A0A069CVZ7	79.3	0.0000000000000552	Putative phage tail protein	N/A
eggNOG-mapper	UHGV-1354239_18	1329250.WOSG25_220030	79.3	0.00000000000000926	phage tail	N/A
COG	UHGV-1354239_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1354239_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_19	phrog_1330	266.1	0	tail protein	tail
eggNOG-mapper	UHGV-1354239_19	1329250.WOSG25_220020	181.0	3.08286e-44	Prophage endopeptidase tail	N/A
Pfam	UHGV-1354239_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1354239_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1354239_19	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1354239_19	PF14594,PF00629,PF10528,TIGR01665,NF033675,NF038393,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_21	phrog_1554	136.7	6.09999e-41	N/A	unknown function
UniRef90	UHGV-1354239_21	UniRef90_A0A7X2X378	100.0	4.65e-23	N/A	N/A
eggNOG-mapper	UHGV-1354239_21	1035189.HMPREF9954_1920	113.0	1.05e-28	N/A	N/A
structural_annotation	UHGV-1354239_21	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_22	phrog_5073	40.5	0.000000000031	tail fiber protein	tail
UniRef90	UHGV-1354239_23	UniRef90_A0A8B1YVU1	827.0	0	SGNH/GDSL hydrolase family protein	N/A
eggNOG-mapper	UHGV-1354239_23	1349822.NSB1T_12060	98.2	1.77e-18	N/A	N/A
structural_annotation	UHGV-1354239_26	PF17376	N/A	N/A	N/A	N/A
PHROG	UHGV-1354239_27	phrog_1494	49.9	0.000000000000038	N/A	unknown function