Overview | |
---|---|
UHGV ID | UHGV-1355354 |
vOTU ID | vOTU-138655 |
Representative Genome? | Yes |
Source | GVD |
Original genome ID | Shkoporov_2019_SRR9161554_NODE_146_length_18716_cov_9.626708 |
Associated BioSample | SAMN11893726 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 49.83 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 10 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9768 |
Virus hallmark genes (geNomad) | 9 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 17.75 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 18,716 |
GC content | 52.37% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 25 |
CDS density | 95% |
Average CDS length (bps) | 708.96 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |