UHGV-1358186 (vOTU-054795)

Viral Genome: UHGV-1358186

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1358186
vOTU ID	vOTU-054795
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0277208
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9818
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.07
Jumbo phage	No

Genome content
Genome length (bp)	41,558
GC content	56.90%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	91%
Average CDS length (bps)	566.69
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1358186_2	phrog_937	44.9	0.000000000002	hemolysin	other
eggNOG-mapper	UHGV-1358186_2	1007096.BAGW01000017_gene814	50.8	0.000000832	N/A	N/A
PHROG	UHGV-1358186_4	phrog_13256	57.4	1.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-1358186_4	1226322.HMPREF1545_00607	67.8	0.0000000000000452	N/A	N/A
PHROG	UHGV-1358186_5	phrog_21357	99.0	4.4e-29	endolysin	lysis
UniRef90	UHGV-1358186_5	UniRef90_UPI001C00DA69	247.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_5	1007096.BAGW01000017_gene816	162.0	0	CHAP domain	N/A
Pfam	UHGV-1358186_5	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1358186_5	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1358186_5	PF06672,TIGR02594,COG4322	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358186_6	UniRef90_A0A8D9PDQ3	76.3	1.46e-16	ECF sigma factor	N/A
structural_annotation	UHGV-1358186_6	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_7	phrog_374	67.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358186_7	UniRef90_A0A2G2M2K8	214.0	0	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_7	887929.HMP0721_2409	140.0	1.2e-37	N/A	N/A
structural_annotation	UHGV-1358186_7	PF18337,PF00847	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_8	phrog_25567	62.9	4.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1358186_8	1408312.JNJS01000001_gene1338	48.5	0.00000778	sequence-specific DNA binding	N/A
COG	UHGV-1358186_8	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1358186_8	NF040522,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358186_9	COG4451	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_11	phrog_3754	112.7	2.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-1358186_11	1226322.HMPREF1545_00073	162.0	0	N/A	N/A
PHROG	UHGV-1358186_12	phrog_21718	110.9	9.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-1358186_12	397290.C810_05210	67.8	0.00000000000392	N/A	N/A
PHROG	UHGV-1358186_13	phrog_22984	72.8	3.3e-21	N/A	unknown function
PHROG	UHGV-1358186_14	phrog_16490	144.5	9.59889e-43	N/A	unknown function
eggNOG-mapper	UHGV-1358186_14	1408437.JNJN01000043_gene803	164.0	0	N/A	N/A
PHROG	UHGV-1358186_15	phrog_20016	178.9	0	N/A	unknown function
UniRef90	UHGV-1358186_15	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1358186_15	397290.C810_05214	159.0	0	N/A	N/A
structural_annotation	UHGV-1358186_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_16	phrog_28802	45.9	0.00000000000079	N/A	unknown function
structural_annotation	UHGV-1358186_16	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358186_17	1232443.BAIA02000078_gene6	66.6	0.0000000000015	N/A	N/A
KOfam	UHGV-1358186_18	K14059	212.4	0	int; integrase	N/A
PHROG	UHGV-1358186_18	phrog_1	186.3	0	integrase	integration and excision
UniRef90	UHGV-1358186_18	UniRef90_UPI001C124E9B	483.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1358186_18	1226322.HMPREF1545_00144	329.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1358186_18	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1358186_18	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1358186_18	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1358186_18	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358186_19	UniRef90_A0A810PZB1	78.6	0.00000000000000209	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1358186_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1358186_19	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358186_21	UniRef90_A0A3D3Y0G5	92.8	3.67e-21	HTH cro/C1-type domain-containing protein	N/A
COG	UHGV-1358186_21	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1358186_21	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358186_22	477974.Daud_0794	65.5	0.000000000185	PFAM nuclease (SNase	N/A
Pfam	UHGV-1358186_22	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-1358186_22	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
KOfam	UHGV-1358186_23	K22299	45.9	0.0000000000012	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1358186_23	phrog_8	45.3	0.0000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-1358186_23	UniRef90_A0A810QCI5	76.3	5.66e-17	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_23	877424.ATWC01000044_gene1645	52.4	0.0000000646	sequence-specific DNA binding	N/A
Pfam	UHGV-1358186_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1358186_23	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1358186_23	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358186_24	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_26	phrog_757	199.2	0	DNA methyltransferase	other
UniRef90	UHGV-1358186_26	UniRef90_A0A355KVL2	356.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1358186_26	748224.HMPREF9436_03069	356.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1358186_26	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1358186_26	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_27	phrog_2245	88.0	1.1e-25	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1358186_27	UniRef90_A0A1Y4MJF4	78.2	6.39e-16	N/A	N/A
eggNOG-mapper	UHGV-1358186_27	1226322.HMPREF1545_03523	75.5	0.00000000000000823	N/A	N/A
structural_annotation	UHGV-1358186_27	PF09392	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358186_29	760568.Desku_0919	110.0	1.62e-27	N/A	N/A
structural_annotation	UHGV-1358186_29	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_31	phrog_674	136.8	1.4e-40	N/A	unknown function
UniRef90	UHGV-1358186_31	UniRef90_UPI000553F60F	158.0	4.4281e-43	N/A	N/A
eggNOG-mapper	UHGV-1358186_31	665956.HMPREF1032_03103	160.0	2.66247e-44	N/A	N/A
Pfam	UHGV-1358186_31	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1358186_31	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_32	phrog_3657	354.0	0	N/A	unknown function
UniRef90	UHGV-1358186_32	UniRef90_UPI001DC4E782	317.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_32	411461.DORFOR_00020	351.0	0	N/A	N/A
PHROG	UHGV-1358186_33	phrog_392	95.7	6.2e-28	metal-dependent hydrolase	other
UniRef90	UHGV-1358186_33	UniRef90_G9YN42	217.0	0	Metallo-beta-lactamase domain protein	N/A
eggNOG-mapper	UHGV-1358186_33	665956.HMPREF1032_03101	185.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1358186_33	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-1358186_33	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1358186_33	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_34	phrog_15768	61.2	2.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1358186_34	1410650.JHWL01000003_gene2848	56.6	0.000000706	N/A	N/A
Pfam	UHGV-1358186_34	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1358186_34	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_35	phrog_9804	160.9	0	N/A	unknown function
UniRef90	UHGV-1358186_35	UniRef90_A0A3D1LDS2	189.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_35	1121344.JHZO01000003_gene981	184.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1358186_35	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1358186_35	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_37	phrog_474	101.7	1.2e-29	phosphofructokinase	other
UniRef90	UHGV-1358186_37	UniRef90_A0A2V2EHL9	147.0	5.1848e-44	N/A	N/A
eggNOG-mapper	UHGV-1358186_37	1203606.HMPREF1526_00237	102.0	7.03e-27	N/A	N/A
Pfam	UHGV-1358186_37	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1358186_37	PF19905	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358186_40	UniRef90_A0A8D9PDT5	62.4	0.000000000214	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-1358186_42	phrog_190	94.2	1.5e-27	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358186_42	UniRef90_UPI001A9BF0E5	106.0	3.6e-27	N/A	N/A
eggNOG-mapper	UHGV-1358186_42	292.DM42_4034	92.8	2.49e-21	N/A	N/A
Pfam	UHGV-1358186_42	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1358186_42	PF06356	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358186_43	UniRef90_A0A098GES5	99.4	3.8e-25	Putative phage associated protein	N/A
structural_annotation	UHGV-1358186_43	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358186_44	UniRef90_UPI0012AD39DD	59.3	0.000000176	leucine-rich repeat protein	N/A
KOfam	UHGV-1358186_45	K08309	44.7	0.0000000000017	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-1358186_45	phrog_19890	99.6	2.3e-29	N/A	unknown function
UniRef90	UHGV-1358186_45	UniRef90_A0A645B8D1	190.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_45	411468.CLOSCI_01470	97.8	2.34e-22	Transglycosylase SLT domain	N/A
Pfam	UHGV-1358186_45	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1358186_45	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1358186_45	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
Pfam	UHGV-1358186_46	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1358186_46	PF13384	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358186_47	1297617.JPJD01000059_gene2640	79.3	1.43e-17	N/A	N/A
structural_annotation	UHGV-1358186_47	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_48	phrog_606	83.5	2.7e-24	terminase small subunit	head and packaging
UniRef90	UHGV-1358186_48	UniRef90_UPI00195648BB	175.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1358186_48	397290.C810_05185	147.0	5.81539e-43	DNA-packaging protein gp3	N/A
Pfam	UHGV-1358186_48	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1358186_48	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1358186_49	K06909	142.9	2.90069e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1358186_49	phrog_10250	174.0	0	N/A	unknown function
UniRef90	UHGV-1358186_49	UniRef90_A0A3D3Y0N9	503.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1358186_49	1226322.HMPREF1545_00043	437.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1358186_49	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1358186_49	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1358186_49	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1358186_49	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1358186_49	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_50	phrog_64	160.9	0	portal protein	head and packaging
UniRef90	UHGV-1358186_50	UniRef90_UPI0018A8A301	588.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1358186_50	1235800.C819_02239	87.8	9.38e-16	phage portal protein, SPP1	N/A
Pfam	UHGV-1358186_50	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1358186_50	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_51	phrog_115	111.1	6.7e-33	minor head protein	head and packaging
UniRef90	UHGV-1358186_51	UniRef90_A0A810PSD3	540.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_51	1111135.HMPREF1248_0663	178.0	0	cell adhesion	N/A
Pfam	UHGV-1358186_51	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1358186_51	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358186_51	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_52	phrog_5	72.6	7.4e-21	tail completion or Neck1 protein	connector
UniRef90	UHGV-1358186_52	UniRef90_A0A4D7AJK9	189.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1358186_52	386415.NT01CX_2170	107.0	5.54e-28	N/A	N/A
Pfam	UHGV-1358186_52	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1358186_52	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1358186_52	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358186_53	UniRef90_A0A6B9SU02	103.0	6.14e-24	Fibronectin autolysin	N/A
structural_annotation	UHGV-1358186_53	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_54	phrog_544	180.8	0	major head protein	head and packaging
UniRef90	UHGV-1358186_54	UniRef90_A0A810PZM2	722.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_54	1347392.CCEZ01000005_gene1236	275.0	0	N/A	N/A
Pfam	UHGV-1358186_54	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1358186_54	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_56	phrog_17977	78.5	6e-23	N/A	unknown function
UniRef90	UHGV-1358186_56	UniRef90_A0A285PT57	96.7	1.46e-23	Phage head-tail joining protein	N/A
structural_annotation	UHGV-1358186_56	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_57	phrog_17405	47.5	0.00000000000029	head protein	head and packaging
structural_annotation	UHGV-1358186_57	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_58	phrog_885	83.2	2.7e-24	major tail protein	tail
UniRef90	UHGV-1358186_58	UniRef90_A0A843J9F0	222.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1358186_58	1504822.CCNO01000012_gene492	247.0	0	N/A	N/A
structural_annotation	UHGV-1358186_58	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_59	phrog_18646	49.8	0.000000000000061	N/A	unknown function
PHROG	UHGV-1358186_61	phrog_6900	255.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1358186_61	UniRef90_A0A3D1JBH2	253.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-1358186_61	1499683.CCFF01000017_gene2565	286.0	0	tape measure	N/A
COG	UHGV-1358186_61	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358186_61	PF20155	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358186_62	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_63	phrog_32308	68.3	3e-20	N/A	unknown function
UniRef90	UHGV-1358186_63	UniRef90_A0A2Z4QA17	169.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-1358186_63	1235797.C816_04180	167.0	0	N/A	N/A
structural_annotation	UHGV-1358186_63	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_64	phrog_32308	45.3	4.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-1358186_64	1235797.C816_04179	124.0	4.43e-28	Chaperone of endosialidase	N/A
eggNOG-mapper	UHGV-1358186_65	1395587.P364_0113810	66.2	0.000000000522	Fibronectin type 3 domain	N/A
COG	UHGV-1358186_65	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1358186_65	PF17744,NF011813,COG3979	N/A	N/A	N/A	N/A
PHROG	UHGV-1358186_67	phrog_24896	360.5	0	N/A	unknown function
UniRef90	UHGV-1358186_67	UniRef90_UPI00164C79DA	1054.0	0	CotH kinase family protein	N/A
eggNOG-mapper	UHGV-1358186_67	657322.FPR_22010	759.0	0	N/A	N/A
Pfam	UHGV-1358186_67	PF08757	N/A	N/A	CotH kinase protein	CotH
structural_annotation	UHGV-1358186_67	PF08757,PF19789,PF00354,PF17790,PF17166,PF16967,MF_04116,NF033188,TIGR04216,COG5337,COG1470	N/A	N/A	N/A	N/A